RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 RESTQ13127 1097 aa14.7□□□□□ -0.06
HMGB3P4-201ENST00000428776 FERMT3Q86UX7 667 aa14.7□□□□□ -0.06
HMGB3P4-201ENST00000428776 RIOX1Q9H6W3 641 aa14.7□□□□□ -0.06
HMGB3P4-201ENST00000428776 FRMPD2Q68DX3 1309 aaPredicted RBP14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 DDX11L8A8MPP1 907 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 CYTH3O43739 400 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 PTMSP20962 102 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 INPP5BP32019 993 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 ECE1P42892 770 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 CCDC96Q2M329 555 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 MCTP1Q6DN14 999 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 OTUD7BQ6GQQ9 843 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 RASGRP2Q7LDG7 609 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 SCYL3Q8IZE3 742 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 FAM177A1Q8N128 213 aaPredicted RBP14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 KLRG1Q96E93 195 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 RRP36Q96EU6 259 aaKnown RBP14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 WRNIP1Q96S55 665 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 GPCPD1Q9NPB8 672 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 SH3GLB2Q9NR46 395 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 GJB4Q9NTQ9 266 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 UTRNP46939 3433 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 PARP14Q460N5 1801 aa14.69□□□□□ -0.06
HMGB3P4-201ENST00000428776 PTPRFP10586 1907 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 hCG_1642624A0A1W2PR95 340 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 ADM5C9JUS6 153 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 RAD21O60216 631 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 NDUFB10O96000 172 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 MMP1P03956 469 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 VEGFAP15692 232 aaPredicted RBP14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 NF2P35240 595 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 SAFBQ15424 915 aaKnown RBP eCLIP14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 SLC35G1Q2M3R5 365 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 EAPPQ56P03 285 aaPredicted RBP14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 BRAPQ7Z569 592 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 ACER1Q8TDN7 264 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 UBA5Q9GZZ9 404 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 VCPKMTQ9H867 229 aa14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 SEC63Q9UGP8 760 aaKnown RBP14.68□□□□□ -0.06
HMGB3P4-201ENST00000428776 hCG_1984214I3L0E3 225 aa14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 PPP1R12BO60237 982 aaPredicted RBP14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 USP2O75604 605 aaPredicted RBP14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 BMP3P12645 472 aa14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 KIF23Q02241 960 aaPredicted RBP14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 NOL9Q5SY16 702 aaKnown RBP14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 ATL3Q6DD88 541 aa14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 KCTD1Q719H9 257 aa14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 ZNF713Q8N859 430 aaPredicted RBP14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 CDCA5Q96FF9 252 aa14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 WDR18Q9BV38 432 aa14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 PHF20Q9BVI0 1012 aa14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 CPVLQ9H3G5 476 aa14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 AS3MTQ9HBK9 375 aa14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 PICK1Q9NRD5 415 aa14.67□□□□□ -0.06
HMGB3P4-201ENST00000428776 PTPRAP18433 802 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 U2AF2P26368 475 aaKnown RBP eCLIP14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 KRT85P78386 507 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 GNL2Q13823 731 aaKnown RBP14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 FOXD4L6Q3SYB3 417 aaPredicted RBP14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 TTBK2Q6IQ55 1244 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 BTNL9Q6UXG8 535 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 FOXD4L3Q6VB84 417 aaPredicted RBP14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 ADGRF4Q8IZF3 695 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 PIBF1Q8WXW3 757 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 ZKSCAN4Q969J2 545 aaPredicted RBP14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 FEZ1Q99689 392 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 KIAA1683Q9H0B3 1180 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 FOXP1Q9H334 677 aaPredicted RBP14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 VAT1LQ9HCJ6 419 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 VPS54Q9P1Q0 977 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 KCNJ14Q9UNX9 436 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
HMGB3P4-201ENST00000428776 PNMA6FA0A0J9YX94 578 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 USP17L10C9JJH3 530 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 CALML3P27482 149 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 IREB2P48200 963 aaKnown RBP14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 MAP3K9P80192 1104 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 DNM1Q05193 864 aaKnown RBP14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 CCDC148Q8NFR7 591 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 CCDC12Q8WUD4 166 aaPredicted RBP14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 LPAR1Q92633 364 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 MTMR8Q96EF0 704 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 ZNF396Q96N95 335 aaPredicted RBP14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 PIGSQ96S52 555 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 JMJD4Q9H9V9 463 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 RRAGCQ9HB90 399 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 BRMS1Q9HCU9 246 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 BARHL2Q9NY43 387 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 CFAP45Q9UL16 551 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 ISY1Q9ULR0 285 aaKnown RBP14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 TRPM7Q96QT4 1865 aa14.65□□□□□ -0.06
HMGB3P4-201ENST00000428776 TMEM232C9JQI7 657 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 STXBP3O00186 592 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 ZBTB5O15062 677 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 PLA2G6O60733 806 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 NCLP19338 710 aaKnown RBP14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 KRT2P35908 639 aa14.64□□□□□ -0.07
HMGB3P4-201ENST00000428776 SLC16A2P36021 539 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms