RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ROBO3Q96MS0 1386 aa18.62■□□□□ 0.57
SEC13-210ENST00000428626 STRNO43815 780 aa18.61■□□□□ 0.57
SEC13-210ENST00000428626 CNGA1P29973 690 aa18.61■□□□□ 0.57
SEC13-210ENST00000428626 FAM83BQ5T0W9 1011 aa18.61■□□□□ 0.57
SEC13-210ENST00000428626 OLFML2BQ68BL8 750 aa18.61■□□□□ 0.57
SEC13-210ENST00000428626 NCAPG2Q86XI2 1143 aa18.61■□□□□ 0.57
SEC13-210ENST00000428626 REPS2Q8NFH8 660 aa18.61■□□□□ 0.57
SEC13-210ENST00000428626 LRCH3Q96II8 777 aa18.61■□□□□ 0.57
SEC13-210ENST00000428626 NUP88Q99567 741 aaPredicted RBP18.61■□□□□ 0.57
SEC13-210ENST00000428626 A0A1W2PPC1 479 aa18.6■□□□□ 0.57
SEC13-210ENST00000428626 MINDY4BA8MYZ0 360 aa18.6■□□□□ 0.57
SEC13-210ENST00000428626 MAGEA10P43363 369 aaPredicted RBP18.6■□□□□ 0.57
SEC13-210ENST00000428626 PRAMEF19Q5SWL8 479 aa18.6■□□□□ 0.57
SEC13-210ENST00000428626 GIMAP6Q6P9H5 292 aa18.6■□□□□ 0.57
SEC13-210ENST00000428626 IGKV6D-41A0A0C4DH26 115 aa18.59■□□□□ 0.57
SEC13-210ENST00000428626 VWA5AO00534 786 aa18.59■□□□□ 0.57
SEC13-210ENST00000428626 PRDM1O75626 825 aa18.59■□□□□ 0.57
SEC13-210ENST00000428626 BMP8BP34820 402 aa18.59■□□□□ 0.57
SEC13-210ENST00000428626 ANO1Q5XXA6 986 aa18.59■□□□□ 0.57
SEC13-210ENST00000428626 GPATCH3Q96I76 525 aa18.59■□□□□ 0.57
SEC13-210ENST00000428626 MROH8Q9H579 483 aa18.59■□□□□ 0.57
SEC13-210ENST00000428626 ZNF214Q9UL59 606 aaPredicted RBP18.59■□□□□ 0.57
SEC13-210ENST00000428626 PPP1R9AQ9ULJ8 1098 aa18.59■□□□□ 0.57
SEC13-210ENST00000428626 SMCHD1A6NHR9 2005 aa18.59■□□□□ 0.57
SEC13-210ENST00000428626 TTC41PQ6P2S7 1318 aa18.58■□□□□ 0.57
SEC13-210ENST00000428626 SALL3Q9BXA9 1300 aa18.58■□□□□ 0.57
SEC13-210ENST00000428626 RAD21O60216 631 aa18.58■□□□□ 0.56
SEC13-210ENST00000428626 ZFYP08048 801 aaPredicted RBP18.58■□□□□ 0.56
SEC13-210ENST00000428626 ABRAQ8N0Z2 381 aa18.58■□□□□ 0.56
SEC13-210ENST00000428626 MAML3Q96JK9 1138 aa18.58■□□□□ 0.56
SEC13-210ENST00000428626 SENP6Q9GZR1 1112 aaPredicted RBP18.58■□□□□ 0.56
SEC13-210ENST00000428626 GOPCQ9HD26 462 aa18.58■□□□□ 0.56
SEC13-210ENST00000428626 MYH4Q9Y623 1939 aa18.57■□□□□ 0.56
SEC13-210ENST00000428626 FOXP2O15409 715 aa18.57■□□□□ 0.56
SEC13-210ENST00000428626 PGK2P07205 417 aa18.57■□□□□ 0.56
SEC13-210ENST00000428626 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
SEC13-210ENST00000428626 GJC2Q5T442 439 aaPredicted RBP18.57■□□□□ 0.56
SEC13-210ENST00000428626 RIOX2Q8IUF8 465 aa18.57■□□□□ 0.56
SEC13-210ENST00000428626 IFNL3Q8IZI9 196 aa18.57■□□□□ 0.56
SEC13-210ENST00000428626 NYAP2Q9P242 653 aa18.57■□□□□ 0.56
SEC13-210ENST00000428626 PATL2C9JE40 543 aaKnown RBP18.56■□□□□ 0.56
SEC13-210ENST00000428626 F5H6K3 240 aa18.56■□□□□ 0.56
SEC13-210ENST00000428626 MSCO60682 206 aa18.56■□□□□ 0.56
SEC13-210ENST00000428626 NDUFB10O96000 172 aa18.56■□□□□ 0.56
SEC13-210ENST00000428626 FCER1AP12319 257 aa18.56■□□□□ 0.56
SEC13-210ENST00000428626 STAT3P40763 770 aa18.56■□□□□ 0.56
SEC13-210ENST00000428626 TDO2P48775 406 aa18.56■□□□□ 0.56
SEC13-210ENST00000428626 ATN1P54259 1190 aaPredicted RBP18.56■□□□□ 0.56
SEC13-210ENST00000428626 KLRC3Q07444 240 aa18.56■□□□□ 0.56
SEC13-210ENST00000428626 MKNK2Q9HBH9 465 aa18.56■□□□□ 0.56
SEC13-210ENST00000428626 PLXNA1Q9UIW2 1896 aa18.56■□□□□ 0.56
SEC13-210ENST00000428626 DNM1LO00429 736 aa18.55■□□□□ 0.56
SEC13-210ENST00000428626 SEPT4O43236 478 aa18.55■□□□□ 0.56
SEC13-210ENST00000428626 SLC25A27O95847 323 aa18.55■□□□□ 0.56
SEC13-210ENST00000428626 ZMYM1Q5SVZ6 1142 aa18.55■□□□□ 0.56
SEC13-210ENST00000428626 CEP95Q96GE4 821 aa18.55■□□□□ 0.56
SEC13-210ENST00000428626 CRBNQ96SW2 442 aa18.55■□□□□ 0.56
SEC13-210ENST00000428626 MMP19Q99542 508 aa18.55■□□□□ 0.56
SEC13-210ENST00000428626 CLIP2Q9UDT6 1046 aa18.55■□□□□ 0.56
SEC13-210ENST00000428626 RIPK3Q9Y572 518 aa18.55■□□□□ 0.56
SEC13-210ENST00000428626 APPP05067 770 aa18.54■□□□□ 0.56
SEC13-210ENST00000428626 TAL1P17542 331 aaPredicted RBP18.54■□□□□ 0.56
SEC13-210ENST00000428626 GNAT2P19087 354 aa18.54■□□□□ 0.56
SEC13-210ENST00000428626 ZNF792Q3KQV3 632 aa18.54■□□□□ 0.56
SEC13-210ENST00000428626 CCDC129Q6ZRS4 1044 aa18.54■□□□□ 0.56
SEC13-210ENST00000428626 SLF1Q9BQI6 1058 aa18.54■□□□□ 0.56
SEC13-210ENST00000428626 TACC3Q9Y6A5 838 aa18.54■□□□□ 0.56
SEC13-210ENST00000428626 MX1P20591 662 aa18.53■□□□□ 0.56
SEC13-210ENST00000428626 MDM2Q00987 491 aaPredicted RBP18.53■□□□□ 0.56
SEC13-210ENST00000428626 FAM47AQ5JRC9 791 aa18.53■□□□□ 0.56
SEC13-210ENST00000428626 MKL1Q969V6 931 aa18.53■□□□□ 0.56
SEC13-210ENST00000428626 FSD1Q9BTV5 496 aa18.53■□□□□ 0.56
SEC13-210ENST00000428626 MTMR4Q9NYA4 1195 aa18.53■□□□□ 0.56
SEC13-210ENST00000428626 COL6A3P12111 3177 aa18.52■□□□□ 0.56
SEC13-210ENST00000428626 ERC2O15083 957 aa18.52■□□□□ 0.56
SEC13-210ENST00000428626 ZNF444Q8N0Y2 327 aaPredicted RBP18.52■□□□□ 0.56
SEC13-210ENST00000428626 LRRC47Q8N1G4 583 aaKnown RBP18.52■□□□□ 0.56
SEC13-210ENST00000428626 UBE2OQ9C0C9 1292 aaKnown RBP18.52■□□□□ 0.56
SEC13-210ENST00000428626 INCENPQ9NQS7 918 aa18.52■□□□□ 0.56
SEC13-210ENST00000428626 SLC5A4Q9NY91 659 aa18.52■□□□□ 0.56
SEC13-210ENST00000428626 PLIN4Q96Q06 1357 aa18.52■□□□□ 0.55
SEC13-210ENST00000428626 RTP1P59025 263 aa18.51■□□□□ 0.55
SEC13-210ENST00000428626 PPARAQ07869 468 aa18.51■□□□□ 0.55
SEC13-210ENST00000428626 KCTD2Q14681 263 aa18.51■□□□□ 0.55
SEC13-210ENST00000428626 LRRC41Q15345 812 aa18.51■□□□□ 0.55
SEC13-210ENST00000428626 SNRNP48Q6IEG0 339 aaKnown RBP18.51■□□□□ 0.55
SEC13-210ENST00000428626 TDHQ8IZJ6 230 aa18.51■□□□□ 0.55
SEC13-210ENST00000428626 NEDD1Q8NHV4 660 aa18.51■□□□□ 0.55
SEC13-210ENST00000428626 LENG1Q96BZ8 264 aaPredicted RBP18.51■□□□□ 0.55
SEC13-210ENST00000428626 TINF2Q9BSI4 451 aa18.51■□□□□ 0.55
SEC13-210ENST00000428626 ZNF865P0CJ78 1059 aaPredicted RBP18.5■□□□□ 0.55
SEC13-210ENST00000428626 LRIT3Q3SXY7 679 aa18.5■□□□□ 0.55
SEC13-210ENST00000428626 ANKRD45Q5TZF3 282 aa18.5■□□□□ 0.55
SEC13-210ENST00000428626 VPS53Q5VIR6 699 aa18.5■□□□□ 0.55
SEC13-210ENST00000428626 SLC39A5Q6ZMH5 540 aa18.5■□□□□ 0.55
SEC13-210ENST00000428626 PRPF38AQ8NAV1 312 aaKnown RBP18.5■□□□□ 0.55
SEC13-210ENST00000428626 ARRDC4Q8NCT1 418 aa18.5■□□□□ 0.55
SEC13-210ENST00000428626 TEX13BQ9BXU2 312 aa18.5■□□□□ 0.55
SEC13-210ENST00000428626 DIS3Q9Y2L1 958 aaKnown RBP18.5■□□□□ 0.55
SEC13-210ENST00000428626 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms