RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 RABGAP1Q9Y3P9 1069 aa27.55■■■□□ 2
GLI3-202ENST00000428534 BMP3P12645 472 aa27.54■■■□□ 2
GLI3-202ENST00000428534 MCCP23508 829 aa27.54■■■□□ 2
GLI3-202ENST00000428534 DSG3P32926 999 aa27.54■■■□□ 2
GLI3-202ENST00000428534 SLC1A4P43007 532 aa27.54■■■□□ 2
GLI3-202ENST00000428534 LACTBP83111 547 aaPredicted RBP27.54■■■□□ 2
GLI3-202ENST00000428534 RCSD1Q6JBY9 416 aa27.54■■■□□ 2
GLI3-202ENST00000428534 ANKRD13CQ8N6S4 541 aa27.54■■■□□ 2
GLI3-202ENST00000428534 GPRC5AQ8NFJ5 357 aa27.54■■■□□ 2
GLI3-202ENST00000428534 DCAF4Q8WV16 495 aa27.54■■■□□ 2
GLI3-202ENST00000428534 KAT14Q9H8E8 782 aa27.54■■■□□ 2
GLI3-202ENST00000428534 GTF3C3Q9Y5Q9 886 aa27.54■■■□□ 2
GLI3-202ENST00000428534 TNKSO95271 1327 aa27.53■■■□□ 2
GLI3-202ENST00000428534 FDX1P10109 184 aa27.53■■■□□ 2
GLI3-202ENST00000428534 HOXD10P28358 340 aa27.53■■■□□ 2
GLI3-202ENST00000428534 MCM5P33992 734 aa27.53■■■□□ 2
GLI3-202ENST00000428534 CCNA1P78396 465 aa27.53■■■□□ 2
GLI3-202ENST00000428534 FAM83BQ5T0W9 1011 aa27.53■■■□□ 2
GLI3-202ENST00000428534 CHURC1Q8WUH1 139 aa27.53■■■□□ 2
GLI3-202ENST00000428534 ZKSCAN3Q9BRR0 538 aa27.53■■■□□ 2
GLI3-202ENST00000428534 MYH4Q9Y623 1939 aa27.52■■■□□ 2
GLI3-202ENST00000428534 HMGB1P09429 215 aaKnown RBP27.52■■■□□ 2
GLI3-202ENST00000428534 IFIT1BQ5T764 474 aaKnown RBP27.52■■■□□ 2
GLI3-202ENST00000428534 FAM160B2Q86V87 743 aa27.52■■■□□ 2
GLI3-202ENST00000428534 PRPF38AQ8NAV1 312 aaKnown RBP27.52■■■□□ 2
GLI3-202ENST00000428534 SPDYE16A6NNV3 312 aaPredicted RBP27.51■■□□□ 1.99
GLI3-202ENST00000428534 PLA2G6O60733 806 aa27.51■■□□□ 1.99
GLI3-202ENST00000428534 HSPA4P34932 840 aa27.51■■□□□ 1.99
GLI3-202ENST00000428534 FCGRTP55899 365 aa27.51■■□□□ 1.99
GLI3-202ENST00000428534 STOX1Q6ZVD7 989 aa27.51■■□□□ 1.99
GLI3-202ENST00000428534 CCAR1Q8IX12 1150 aaKnown RBP27.51■■□□□ 1.99
GLI3-202ENST00000428534 TMTC2Q8N394 836 aa27.51■■□□□ 1.99
GLI3-202ENST00000428534 CD99L2Q8TCZ2 262 aa27.51■■□□□ 1.99
GLI3-202ENST00000428534 SLF1Q9BQI6 1058 aa27.51■■□□□ 1.99
GLI3-202ENST00000428534 EFCC1Q9HA90 598 aa27.51■■□□□ 1.99
GLI3-202ENST00000428534 IFIT3O14879 490 aaKnown RBP27.5■■□□□ 1.99
GLI3-202ENST00000428534 PRMT2P55345 433 aa27.5■■□□□ 1.99
GLI3-202ENST00000428534 MB21D2Q8IYB1 491 aaPredicted RBP27.5■■□□□ 1.99
GLI3-202ENST00000428534 ENAHQ8N8S7 591 aaPredicted RBP27.5■■□□□ 1.99
GLI3-202ENST00000428534 TMEM87BQ96K49 555 aa27.5■■□□□ 1.99
GLI3-202ENST00000428534 RBPJLQ9UBG7 517 aa27.5■■□□□ 1.99
GLI3-202ENST00000428534 PPP1R9AQ9ULJ8 1098 aa27.5■■□□□ 1.99
GLI3-202ENST00000428534 STAT2P52630 851 aa27.49■■□□□ 1.99
GLI3-202ENST00000428534 ERVK-9P63128 1117 aa27.49■■□□□ 1.99
GLI3-202ENST00000428534 ERVK-24P63145 666 aa27.49■■□□□ 1.99
GLI3-202ENST00000428534 FBXO46Q6PJ61 603 aaPredicted RBP27.49■■□□□ 1.99
GLI3-202ENST00000428534 CYB5R4Q7L1T6 521 aa27.49■■□□□ 1.99
GLI3-202ENST00000428534 PNMA1Q8ND90 353 aa27.49■■□□□ 1.99
GLI3-202ENST00000428534 KCNB2Q92953 911 aa27.49■■□□□ 1.99
GLI3-202ENST00000428534 NEK1Q96PY6 1258 aa27.49■■□□□ 1.99
GLI3-202ENST00000428534 PAGR1Q9BTK6 254 aa27.49■■□□□ 1.99
GLI3-202ENST00000428534 ISY1Q9ULR0 285 aaKnown RBP27.49■■□□□ 1.99
GLI3-202ENST00000428534 CTDP1Q9Y5B0 961 aaPredicted RBP27.49■■□□□ 1.99
GLI3-202ENST00000428534 FMNL1O95466 1100 aaPredicted RBP27.48■■□□□ 1.99
GLI3-202ENST00000428534 PSMC4P43686 418 aa27.48■■□□□ 1.99
GLI3-202ENST00000428534 WTAPQ15007 396 aa27.48■■□□□ 1.99
GLI3-202ENST00000428534 USP26Q9BXU7 913 aa27.48■■□□□ 1.99
GLI3-202ENST00000428534 ADAMTS5Q9UNA0 930 aa27.48■■□□□ 1.99
GLI3-202ENST00000428534 TAF6LQ9Y6J9 622 aa27.48■■□□□ 1.99
GLI3-202ENST00000428534 MKI67P46013 3256 aaKnown RBP27.48■■□□□ 1.99
GLI3-202ENST00000428534 PSMA5P28066 241 aa27.47■■□□□ 1.99
GLI3-202ENST00000428534 MAPK4P31152 587 aa27.47■■□□□ 1.99
GLI3-202ENST00000428534 IKQ13123 557 aaPredicted RBP27.47■■□□□ 1.99
GLI3-202ENST00000428534 GPATCH4Q5T3I0 446 aaKnown RBP27.47■■□□□ 1.99
GLI3-202ENST00000428534 COA7Q96BR5 231 aa27.47■■□□□ 1.99
GLI3-202ENST00000428534 NUP88Q99567 741 aaPredicted RBP27.47■■□□□ 1.99
GLI3-202ENST00000428534 TRIM17Q9Y577 477 aa27.47■■□□□ 1.99
GLI3-202ENST00000428534 WDR19Q8NEZ3 1342 aa27.46■■□□□ 1.99
GLI3-202ENST00000428534 TMEM232C9JQI7 657 aa27.46■■□□□ 1.99
GLI3-202ENST00000428534 ZBED4O75132 1171 aa27.46■■□□□ 1.99
GLI3-202ENST00000428534 SEC23AQ15436 765 aa27.46■■□□□ 1.99
GLI3-202ENST00000428534 CCDC96Q2M329 555 aa27.46■■□□□ 1.99
GLI3-202ENST00000428534 TMEM67Q5HYA8 995 aa27.46■■□□□ 1.99
GLI3-202ENST00000428534 NKX2-3Q8TAU0 364 aa27.46■■□□□ 1.99
GLI3-202ENST00000428534 BRCA2P51587 3418 aa27.45■■□□□ 1.98
GLI3-202ENST00000428534 PRC1O43663 620 aa27.45■■□□□ 1.98
GLI3-202ENST00000428534 SNHG28P0DPA3 235 aa27.45■■□□□ 1.98
GLI3-202ENST00000428534 PDHBP11177 359 aa27.45■■□□□ 1.98
GLI3-202ENST00000428534 COPB2P35606 906 aa27.45■■□□□ 1.98
GLI3-202ENST00000428534 OTOP1Q7RTM1 612 aa27.45■■□□□ 1.98
GLI3-202ENST00000428534 ATG4CQ96DT6 458 aa27.45■■□□□ 1.98
GLI3-202ENST00000428534 CWC22Q9HCG8 908 aaKnown RBP27.45■■□□□ 1.98
GLI3-202ENST00000428534 TXNRD2Q9NNW7 524 aa27.45■■□□□ 1.98
GLI3-202ENST00000428534 MTMR7Q9Y216 660 aa27.45■■□□□ 1.98
GLI3-202ENST00000428534 VWA5AO00534 786 aa27.44■■□□□ 1.98
GLI3-202ENST00000428534 TNPO2O14787 897 aaKnown RBP27.44■■□□□ 1.98
GLI3-202ENST00000428534 SAMD1Q6SPF0 538 aaPredicted RBP27.44■■□□□ 1.98
GLI3-202ENST00000428534 DHX32Q7L7V1 743 aaKnown RBP27.44■■□□□ 1.98
GLI3-202ENST00000428534 FBXO28Q9NVF7 368 aa27.44■■□□□ 1.98
GLI3-202ENST00000428534 SLC25A27O95847 323 aa27.43■■□□□ 1.98
GLI3-202ENST00000428534 LIFRP42702 1097 aa27.43■■□□□ 1.98
GLI3-202ENST00000428534 ASPRV1Q53RT3 343 aa27.43■■□□□ 1.98
GLI3-202ENST00000428534 BTNL9Q6UXG8 535 aa27.43■■□□□ 1.98
GLI3-202ENST00000428534 KCTD1Q719H9 257 aa27.43■■□□□ 1.98
GLI3-202ENST00000428534 RASEFQ8IZ41 740 aa27.43■■□□□ 1.98
GLI3-202ENST00000428534 SHCBP1Q8NEM2 672 aa27.43■■□□□ 1.98
GLI3-202ENST00000428534 IGDCC4Q8TDY8 1250 aa27.43■■□□□ 1.98
GLI3-202ENST00000428534 KIFC2Q96AC6 838 aa27.43■■□□□ 1.98
GLI3-202ENST00000428534 SPATC1LQ9H0A9 340 aa27.43■■□□□ 1.98
GLI3-202ENST00000428534 PNMA2Q9UL42 364 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms