RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ZNF236Q9UL36 1845 aa19.93■□□□□ 0.78
VARS-216ENST00000428445 ADCYAP1R1P41586 468 aa19.93■□□□□ 0.78
VARS-216ENST00000428445 C20orf194Q5TEA3 1177 aa19.93■□□□□ 0.78
VARS-216ENST00000428445 C16orf86Q6ZW13 317 aa19.93■□□□□ 0.78
VARS-216ENST00000428445 MAML3Q96JK9 1138 aa19.93■□□□□ 0.78
VARS-216ENST00000428445 MROH8Q9H579 483 aa19.93■□□□□ 0.78
VARS-216ENST00000428445 SEPT4O43236 478 aa19.92■□□□□ 0.78
VARS-216ENST00000428445 TAL1P17542 331 aaPredicted RBP19.92■□□□□ 0.78
VARS-216ENST00000428445 TRIM60Q495X7 471 aa19.92■□□□□ 0.78
VARS-216ENST00000428445 FAM47AQ5JRC9 791 aa19.92■□□□□ 0.78
VARS-216ENST00000428445 SH3RF1Q7Z6J0 888 aa19.92■□□□□ 0.78
VARS-216ENST00000428445 MB21D1Q8N884 522 aa19.92■□□□□ 0.78
VARS-216ENST00000428445 ARRDC4Q8NCT1 418 aa19.92■□□□□ 0.78
VARS-216ENST00000428445 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.92■□□□□ 0.78
VARS-216ENST00000428445 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.92■□□□□ 0.782e-7■■■□□ 17.3
VARS-216ENST00000428445 PRDM5Q9NQX1 630 aaPredicted RBP19.92■□□□□ 0.78
VARS-216ENST00000428445 STXBP5LQ9Y2K9 1186 aa19.92■□□□□ 0.78
VARS-216ENST00000428445 LTBP2Q14767 1821 aa19.91■□□□□ 0.78
VARS-216ENST00000428445 KBTBD13C9JR72 458 aa19.91■□□□□ 0.78
VARS-216ENST00000428445 WDR46O15213 610 aaKnown RBP19.91■□□□□ 0.78
VARS-216ENST00000428445 FCER1AP12319 257 aa19.91■□□□□ 0.78
VARS-216ENST00000428445 LRRC41Q15345 812 aa19.91■□□□□ 0.78
VARS-216ENST00000428445 FAM83BQ5T0W9 1011 aa19.91■□□□□ 0.78
VARS-216ENST00000428445 CCDC17Q96LX7 622 aa19.91■□□□□ 0.78
VARS-216ENST00000428445 NUP88Q99567 741 aaPredicted RBP19.91■□□□□ 0.78
VARS-216ENST00000428445 POTEB2H3BUK9 544 aa19.9■□□□□ 0.78
VARS-216ENST00000428445 UBE3CQ15386 1083 aa19.9■□□□□ 0.78
VARS-216ENST00000428445 SHHQ15465 462 aa19.9■□□□□ 0.78
VARS-216ENST00000428445 C9orf50Q5SZB4 431 aa19.9■□□□□ 0.78
VARS-216ENST00000428445 BADQ92934 168 aa19.9■□□□□ 0.78
VARS-216ENST00000428445 LENG1Q96BZ8 264 aaPredicted RBP19.9■□□□□ 0.78
VARS-216ENST00000428445 MMP19Q99542 508 aa19.9■□□□□ 0.78
VARS-216ENST00000428445 PRKAG2Q9UGJ0 569 aa19.9■□□□□ 0.78
VARS-216ENST00000428445 ADAMTS5Q9UNA0 930 aa19.9■□□□□ 0.78
VARS-216ENST00000428445 PLXNA1Q9UIW2 1896 aa19.9■□□□□ 0.78
VARS-216ENST00000428445 TRIM43BA6NCK2 446 aa19.89■□□□□ 0.77
VARS-216ENST00000428445 TSHZ3Q63HK5 1081 aa19.89■□□□□ 0.77
VARS-216ENST00000428445 ABRAQ8N0Z2 381 aa19.89■□□□□ 0.77
VARS-216ENST00000428445 UNC80Q8N2C7 3258 aa19.89■□□□□ 0.77
VARS-216ENST00000428445 TRIM43Q96BQ3 446 aaPredicted RBP19.89■□□□□ 0.77
VARS-216ENST00000428445 GUCD1Q96NT3 240 aa19.89■□□□□ 0.77
VARS-216ENST00000428445 CHMP4BQ9H444 224 aaKnown RBP19.89■□□□□ 0.77
VARS-216ENST00000428445 SH2D4AQ9H788 454 aa19.89■□□□□ 0.77
VARS-216ENST00000428445 KANSL2Q9H9L4 492 aa19.89■□□□□ 0.77
VARS-216ENST00000428445 SLC5A4Q9NY91 659 aa19.89■□□□□ 0.77
VARS-216ENST00000428445 VWA5AO00534 786 aa19.88■□□□□ 0.77
VARS-216ENST00000428445 PGK1P00558 417 aa19.88■□□□□ 0.77
VARS-216ENST00000428445 STAT3P40763 770 aa19.88■□□□□ 0.77
VARS-216ENST00000428445 SLC4A3P48751 1232 aa19.88■□□□□ 0.77
VARS-216ENST00000428445 AMOTL1Q8IY63 956 aa19.88■□□□□ 0.77
VARS-216ENST00000428445 REPS2Q8NFH8 660 aa19.88■□□□□ 0.77
VARS-216ENST00000428445 STRBPQ96SI9 672 aaKnown RBP19.88■□□□□ 0.77
VARS-216ENST00000428445 LRRCC1Q9C099 1032 aa19.88■□□□□ 0.77
VARS-216ENST00000428445 MINDY4BA8MYZ0 360 aa19.87■□□□□ 0.77
VARS-216ENST00000428445 SLC25A27O95847 323 aa19.87■□□□□ 0.77
VARS-216ENST00000428445 ITGB8P26012 769 aa19.87■□□□□ 0.77
VARS-216ENST00000428445 ZNF792Q3KQV3 632 aa19.87■□□□□ 0.77
VARS-216ENST00000428445 RIOX2Q8IUF8 465 aa19.87■□□□□ 0.77
VARS-216ENST00000428445 PDLIM7Q9NR12 457 aa19.87■□□□□ 0.77
VARS-216ENST00000428445 RCAN3Q9UKA8 241 aa19.87■□□□□ 0.77
VARS-216ENST00000428445 ZNF214Q9UL59 606 aaPredicted RBP19.87■□□□□ 0.77
VARS-216ENST00000428445 PPP1R9AQ9ULJ8 1098 aa19.87■□□□□ 0.77
VARS-216ENST00000428445 EYSQ5T1H1 3165 aa19.86■□□□□ 0.77
VARS-216ENST00000428445 GSG1L2A8MUP6 293 aa19.86■□□□□ 0.77
VARS-216ENST00000428445 RASA1P20936 1047 aa19.86■□□□□ 0.77
VARS-216ENST00000428445 SNX17Q15036 470 aa19.86■□□□□ 0.77
VARS-216ENST00000428445 OSBP2Q969R2 916 aa19.86■□□□□ 0.77
VARS-216ENST00000428445 DDRGK1Q96HY6 314 aa19.86■□□□□ 0.77
VARS-216ENST00000428445 TINF2Q9BSI4 451 aa19.86■□□□□ 0.77
VARS-216ENST00000428445 GOPCQ9HD26 462 aa19.86■□□□□ 0.77
VARS-216ENST00000428445 XPNPEP3Q9NQH7 507 aa19.86■□□□□ 0.77
VARS-216ENST00000428445 RIPK3Q9Y572 518 aa19.86■□□□□ 0.77
VARS-216ENST00000428445 ZNF865P0CJ78 1059 aaPredicted RBP19.85■□□□□ 0.77
VARS-216ENST00000428445 TLE2Q04725 743 aa19.85■□□□□ 0.77
VARS-216ENST00000428445 RARBP10826 455 aa19.84■□□□□ 0.77
VARS-216ENST00000428445 IRX5P78411 483 aaPredicted RBP19.84■□□□□ 0.77
VARS-216ENST00000428445 KCTD2Q14681 263 aa19.84■□□□□ 0.77
VARS-216ENST00000428445 ZSCAN25Q6NSZ9 544 aa19.84■□□□□ 0.77
VARS-216ENST00000428445 GREB1LQ9C091 1923 aaPredicted RBP19.84■□□□□ 0.77
VARS-216ENST00000428445 F5H6K3 240 aa19.83■□□□□ 0.77
VARS-216ENST00000428445 PRDM1O75626 825 aa19.83■□□□□ 0.77
VARS-216ENST00000428445 KLRC3Q07444 240 aa19.83■□□□□ 0.77
VARS-216ENST00000428445 CPXCR1Q8N123 301 aa19.83■□□□□ 0.77
VARS-216ENST00000428445 CHMP4CQ96CF2 233 aa19.83■□□□□ 0.77
VARS-216ENST00000428445 MKNK2Q9HBH9 465 aa19.83■□□□□ 0.77
VARS-216ENST00000428445 EPB41L4AQ9HCS5 686 aaPredicted RBP19.83■□□□□ 0.77
VARS-216ENST00000428445 ECHDC1Q9NTX5 307 aa19.83■□□□□ 0.77
VARS-216ENST00000428445 ARPP21Q9UBL0 812 aaPredicted RBP19.83■□□□□ 0.77
VARS-216ENST00000428445 CLIP2Q9UDT6 1046 aa19.83■□□□□ 0.77
VARS-216ENST00000428445 PHF24Q9UPV7 400 aa19.83■□□□□ 0.77
VARS-216ENST00000428445 M0R2C6 588 aa19.82■□□□□ 0.76
VARS-216ENST00000428445 NDUFB10O96000 172 aa19.82■□□□□ 0.76
VARS-216ENST00000428445 EPHB4P54760 987 aa19.82■□□□□ 0.76
VARS-216ENST00000428445 SBK1Q52WX2 424 aa19.82■□□□□ 0.76
VARS-216ENST00000428445 FAM109BQ6ICB4 259 aaPredicted RBP19.82■□□□□ 0.76
VARS-216ENST00000428445 SNRNP48Q6IEG0 339 aaKnown RBP19.82■□□□□ 0.76
VARS-216ENST00000428445 SLF1Q9BQI6 1058 aa19.82■□□□□ 0.76
VARS-216ENST00000428445 MYH4Q9Y623 1939 aa19.82■□□□□ 0.76
VARS-216ENST00000428445 PQBP1O60828 265 aaKnown RBP19.81■□□□□ 0.76
VARS-216ENST00000428445 SNAI1O95863 264 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms