RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 TICAM2Q86XR7 235 aa18.44■□□□□ 0.54
CTDSP1-202ENST00000428361 NAPBQ9H115 298 aa18.44■□□□□ 0.54
CTDSP1-202ENST00000428361 RBM27Q9P2N5 1060 aaKnown RBP18.44■□□□□ 0.54
CTDSP1-202ENST00000428361 PPP1R9AQ9ULJ8 1098 aa18.44■□□□□ 0.54
CTDSP1-202ENST00000428361 RIOX2Q8IUF8 465 aa18.43■□□□□ 0.54
CTDSP1-202ENST00000428361 C7orf61Q8IZ16 206 aa18.43■□□□□ 0.54
CTDSP1-202ENST00000428361 IFNL3Q8IZI9 196 aa18.43■□□□□ 0.54
CTDSP1-202ENST00000428361 NPLOC4Q8TAT6 608 aa18.43■□□□□ 0.54
CTDSP1-202ENST00000428361 ADAMTS5Q9UNA0 930 aa18.43■□□□□ 0.54
CTDSP1-202ENST00000428361 CTDP1Q9Y5B0 961 aaPredicted RBP18.43■□□□□ 0.54
CTDSP1-202ENST00000428361 RLFQ13129 1914 aa18.43■□□□□ 0.54
CTDSP1-202ENST00000428361 M0R2C6 588 aa18.42■□□□□ 0.54
CTDSP1-202ENST00000428361 HDAC1Q13547 482 aaPredicted RBP18.42■□□□□ 0.54
CTDSP1-202ENST00000428361 KCTD2Q14681 263 aa18.42■□□□□ 0.54
CTDSP1-202ENST00000428361 FAM83BQ5T0W9 1011 aa18.42■□□□□ 0.54
CTDSP1-202ENST00000428361 ANKRD45Q5TZF3 282 aa18.42■□□□□ 0.54
CTDSP1-202ENST00000428361 ARRDC4Q8NCT1 418 aa18.42■□□□□ 0.54
CTDSP1-202ENST00000428361 SLF1Q9BQI6 1058 aa18.42■□□□□ 0.54
CTDSP1-202ENST00000428361 EPB41L4AQ9HCS5 686 aaPredicted RBP18.42■□□□□ 0.54
CTDSP1-202ENST00000428361 FLRT1Q9NZU1 646 aa18.42■□□□□ 0.54
CTDSP1-202ENST00000428361 NRBP1Q9UHY1 535 aa18.42■□□□□ 0.54
CTDSP1-202ENST00000428361 GREB1LQ9C091 1923 aaPredicted RBP18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 SMIM22K7EJ46 135 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 DNM1LO00429 736 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 VWA5AO00534 786 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 TTLL1O95922 423 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 COL6A1P12109 1028 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 CYBAP13498 195 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 CYP2C19P33261 490 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 STAT3P40763 770 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 MNX1P50219 401 aaPredicted RBP18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 TMEM132BQ14DG7 1078 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 ZMYM1Q5SVZ6 1142 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 PRPF38AQ8NAV1 312 aaKnown RBP18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 EVI5LQ96CN4 794 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 MMP19Q99542 508 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 PRO3102Q9H379 93 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 DIS3Q9Y2L1 958 aaKnown RBP18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 PLIN4Q96Q06 1357 aa18.41■□□□□ 0.54
CTDSP1-202ENST00000428361 F5H6K3 240 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 TSPY3P0CV98 308 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 TSPY8P0CW00 308 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 BMP8BP34820 402 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 KLRC3Q07444 240 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 STK11IPQ8N1F8 1099 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 MKL1Q969V6 931 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 CRBNQ96SW2 442 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 TEX13BQ9BXU2 312 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 CLIP2Q9UDT6 1046 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 PFASO15067 1338 aa18.4■□□□□ 0.54
CTDSP1-202ENST00000428361 PARP14Q460N5 1801 aa18.39■□□□□ 0.54
CTDSP1-202ENST00000428361 SEPT4O43236 478 aa18.39■□□□□ 0.53
CTDSP1-202ENST00000428361 ZBED4O75132 1171 aa18.39■□□□□ 0.53
CTDSP1-202ENST00000428361 NDUFB10O96000 172 aa18.39■□□□□ 0.53
CTDSP1-202ENST00000428361 FDX1P10109 184 aa18.39■□□□□ 0.53
CTDSP1-202ENST00000428361 MAML3Q96JK9 1138 aa18.39■□□□□ 0.53
CTDSP1-202ENST00000428361 FBXO28Q9NVF7 368 aa18.39■□□□□ 0.53
CTDSP1-202ENST00000428361 MTMR4Q9NYA4 1195 aa18.39■□□□□ 0.53
CTDSP1-202ENST00000428361 FEM1BQ9UK73 627 aa18.39■□□□□ 0.53
CTDSP1-202ENST00000428361 ZNF214Q9UL59 606 aaPredicted RBP18.39■□□□□ 0.53
CTDSP1-202ENST00000428361 IGKV6D-41A0A0C4DH26 115 aa18.38■□□□□ 0.53
CTDSP1-202ENST00000428361 KBTBD13C9JR72 458 aa18.38■□□□□ 0.53
CTDSP1-202ENST00000428361 COBLO75128 1261 aa18.38■□□□□ 0.53
CTDSP1-202ENST00000428361 IGHA2P01877 340 aa18.38■□□□□ 0.53
CTDSP1-202ENST00000428361 PPARAQ07869 468 aa18.38■□□□□ 0.53
CTDSP1-202ENST00000428361 MSL3Q8N5Y2 521 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-202ENST00000428361 GMCL1P1Q8NEA9 526 aa18.38■□□□□ 0.53
CTDSP1-202ENST00000428361 NEDD1Q8NHV4 660 aa18.38■□□□□ 0.53
CTDSP1-202ENST00000428361 CEP95Q96GE4 821 aa18.38■□□□□ 0.53
CTDSP1-202ENST00000428361 STAP2Q9UGK3 403 aa18.38■□□□□ 0.53
CTDSP1-202ENST00000428361 FRMPD3Q5JV73 1810 aa18.37■□□□□ 0.53
CTDSP1-202ENST00000428361 ALPK3Q96L96 1907 aa18.37■□□□□ 0.53
CTDSP1-202ENST00000428361 ATP2A1O14983 1001 aa18.37■□□□□ 0.53
CTDSP1-202ENST00000428361 PRDM1O75626 825 aa18.37■□□□□ 0.53
CTDSP1-202ENST00000428361 OTUD7AQ8TE49 926 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-202ENST00000428361 SENP6Q9GZR1 1112 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-202ENST00000428361 HELLSQ9NRZ9 838 aa18.37■□□□□ 0.53
CTDSP1-202ENST00000428361 FBXO40Q9UH90 709 aa18.37■□□□□ 0.53
CTDSP1-202ENST00000428361 ZMYND8Q9ULU4 1186 aaPredicted RBP18.37■□□□□ 0.53
CTDSP1-202ENST00000428361 SALL3Q9BXA9 1300 aa18.37■□□□□ 0.53
CTDSP1-202ENST00000428361 OAZ1P54368 228 aa18.36■□□□□ 0.53
CTDSP1-202ENST00000428361 PDE1AP54750 535 aa18.36■□□□□ 0.53
CTDSP1-202ENST00000428361 REPS2Q8NFH8 660 aa18.36■□□□□ 0.53
CTDSP1-202ENST00000428361 SEC62Q99442 399 aaKnown RBP18.36■□□□□ 0.53
CTDSP1-202ENST00000428361 GDF15Q99988 308 aa18.36■□□□□ 0.53
CTDSP1-202ENST00000428361 RWDD1Q9H446 243 aaPredicted RBP18.36■□□□□ 0.53
CTDSP1-202ENST00000428361 PRKAG2Q9UGJ0 569 aa18.36■□□□□ 0.53
CTDSP1-202ENST00000428361 MYH4Q9Y623 1939 aa18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 COL11A1P12107 1806 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 TSPY2A6NKD2 308 aa18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 BMP3P12645 472 aa18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 TFAP4Q01664 338 aa18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 SNRNP48Q6IEG0 339 aaKnown RBP18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 FAM160B2Q86V87 743 aa18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 TRPV1Q8NER1 839 aa18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 CHURC1Q8WUH1 139 aa18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 DDX11Q96FC9 970 aa18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 NUP88Q99567 741 aaPredicted RBP18.35■□□□□ 0.53
CTDSP1-202ENST00000428361 TINF2Q9BSI4 451 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms