RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SERTAD1Q9UHV2 236 aa11.9□□□□□ -0.5
HDAC9-210ENST00000428307 VWA3AA6NCI4 1184 aa11.9□□□□□ -0.51
HDAC9-210ENST00000428307 PPIP5K2O43314 1243 aa11.9□□□□□ -0.51
HDAC9-210ENST00000428307 HLA-DOAP06340 250 aa11.9□□□□□ -0.51
HDAC9-210ENST00000428307 SHMT1P34896 483 aa11.9□□□□□ -0.51
HDAC9-210ENST00000428307 ZNF75DP51815 510 aa11.9□□□□□ -0.51
HDAC9-210ENST00000428307 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.51
HDAC9-210ENST00000428307 PCDHA4Q9UN74 947 aa11.9□□□□□ -0.51
HDAC9-210ENST00000428307 PCDHA5Q9Y5H7 936 aa11.9□□□□□ -0.51
HDAC9-210ENST00000428307 NLRP12P59046 1061 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 KIAA2012Q0VF49 1180 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 GRAMD1CQ8IYS0 662 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 SH3GLB2Q9NR46 395 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 BARHL2Q9NY43 387 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 NAV1Q8NEY1 1877 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 DDTLA6NHG4 134 aaPredicted RBP11.89□□□□□ -0.51
HDAC9-210ENST00000428307 STXBP3O00186 592 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 PDHBP11177 359 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 PLA2G4DQ86XP0 818 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 PIGSQ96S52 555 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 LZTS2Q9BRK4 669 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 NRBP1Q9UHY1 535 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 TUBE1Q9UJT0 475 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 SLX4Q8IY92 1834 aa11.89□□□□□ -0.51
HDAC9-210ENST00000428307 CCDC194A0A1B0GVG4 234 aa11.88□□□□□ -0.51
HDAC9-210ENST00000428307 YDJCA8MPS7 323 aa11.88□□□□□ -0.51
HDAC9-210ENST00000428307 BAG6P46379 1132 aa11.88□□□□□ -0.51
HDAC9-210ENST00000428307 NAPAP54920 295 aa11.88□□□□□ -0.51
HDAC9-210ENST00000428307 MDM2Q00987 491 aaPredicted RBP11.88□□□□□ -0.51
HDAC9-210ENST00000428307 SHROOM1Q2M3G4 852 aaPredicted RBP11.88□□□□□ -0.51
HDAC9-210ENST00000428307 SYMPKQ92797 1274 aaKnown RBP11.88□□□□□ -0.51
HDAC9-210ENST00000428307 DHX58Q96C10 678 aa11.88□□□□□ -0.51
HDAC9-210ENST00000428307 RRP36Q96EU6 259 aaKnown RBP11.88□□□□□ -0.51
HDAC9-210ENST00000428307 SPZ1Q9BXG8 430 aa11.88□□□□□ -0.51
HDAC9-210ENST00000428307 TDRD3Q9H7E2 651 aaKnown RBP11.88□□□□□ -0.51
HDAC9-210ENST00000428307 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
HDAC9-210ENST00000428307 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
HDAC9-210ENST00000428307 SWAP70Q9UH65 585 aa11.88□□□□□ -0.51
HDAC9-210ENST00000428307 DLEC1Q9Y238 1755 aa11.88□□□□□ -0.51
HDAC9-210ENST00000428307 DDX60LQ5H9U9 1706 aaKnown RBP11.88□□□□□ -0.51
HDAC9-210ENST00000428307 TNS1Q9HBL0 1735 aaKnown RBP11.88□□□□□ -0.51
HDAC9-210ENST00000428307 A0A087X0B3 334 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 RAD21O60216 631 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 TTLL1O95922 423 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 BMP15O95972 392 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 NOVP48745 357 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 TTLL6Q8N841 843 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 CCDC148Q8NFR7 591 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 SEC63Q9UGP8 760 aaKnown RBP11.87□□□□□ -0.51
HDAC9-210ENST00000428307 PCDHA6Q9UN73 950 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 PCDHA8Q9Y5H6 950 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 GOLGA6L6A8MZA4 724 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 CDC25AP30304 524 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 TRAPPC10P48553 1259 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 ATP2C1P98194 919 aaPredicted RBP11.87□□□□□ -0.51
HDAC9-210ENST00000428307 POSTNQ15063 836 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 INF2Q27J81 1249 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 CCDC186Q7Z3E2 898 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 FERMT2Q96AC1 680 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 PRMT6Q96LA8 375 aaPredicted RBP11.87□□□□□ -0.51
HDAC9-210ENST00000428307 MRIQ9BWK5 157 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 DNAJC18Q9H819 358 aa11.87□□□□□ -0.51
HDAC9-210ENST00000428307 IGKV6D-41A0A0C4DH26 115 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 SMCO2A6NFE2 343 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 ZNF500O60304 480 aaPredicted RBP11.86□□□□□ -0.51
HDAC9-210ENST00000428307 RAD17O75943 681 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 PTGS1P23219 599 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 AFMP43652 599 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 IL17AQ16552 155 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 CC2D2BQ6DHV5 1058 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 SH3BP5LQ7L8J4 393 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 C17orf53Q8N3J3 647 aaPredicted RBP11.86□□□□□ -0.51
HDAC9-210ENST00000428307 ZNF277Q9NRM2 450 aaPredicted RBP11.86□□□□□ -0.51
HDAC9-210ENST00000428307 HOOK1Q9UJC3 728 aaKnown RBP11.86□□□□□ -0.51
HDAC9-210ENST00000428307 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 MYH6P13533 1939 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 M0R2N6 131 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 ACTN4O43707 911 aaKnown RBP11.86□□□□□ -0.51
HDAC9-210ENST00000428307 DPEP1P16444 411 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 BMP6P22004 513 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 FKBP1AP62942 108 aaKnown RBP11.86□□□□□ -0.51
HDAC9-210ENST00000428307 HDLBPQ00341 1268 aaKnown RBP11.86□□□□□ -0.51
HDAC9-210ENST00000428307 CFAP100Q494V2 611 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 PI4KBQ9UBF8 816 aa11.86□□□□□ -0.51
HDAC9-210ENST00000428307 CASP1P29466 404 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 SLC16A2P36021 539 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 TTBK2Q6IQ55 1244 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 SARM1Q6SZW1 724 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 KCTD1Q719H9 257 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 SUPT20HQ8NEM7 779 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 COA7Q96BR5 231 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 IDI2Q9BXS1 227 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 ZMYND12Q9H0C1 365 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 DHX36Q9H2U1 1008 aaKnown RBP11.85□□□□□ -0.51
HDAC9-210ENST00000428307 KCNF1Q9H3M0 494 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 MYH1P12882 1939 aa11.85□□□□□ -0.51
HDAC9-210ENST00000428307 CDK5RAP2Q96SN8 1893 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms