RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 MED10Q9BTT4 135 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 EXOC7Q9UPT5 735 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 XDHP47989 1333 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 ANKARQ7Z5J8 1434 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 POLR2MP0CAP2 368 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 PRPHP41219 470 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 TBC1D9BQ66K14 1250 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 POTEB2H3BUK9 544 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 ATRIPQ8WXE1 791 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 SYNJ2BP-COX16A0A087WUM0 186 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 ERCC5P28715 1186 aaPredicted RBP10.82□□□□□ -0.68
SNX13-203ENST00000428135 POSTNQ15063 836 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 ZNF827Q17R98 1081 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 SEL1L2Q5TEA6 688 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 COX16Q9P0S2 106 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 PSMC4P43686 418 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 SLFNL1Q499Z3 407 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 BSPRYQ5W0U4 402 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 IGSF1Q8N6C5 1336 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 HGSO14964 777 aaPredicted RBP10.82□□□□□ -0.68
SNX13-203ENST00000428135 DLATP10515 647 aaKnown RBP10.82□□□□□ -0.68
SNX13-203ENST00000428135 CDAN1Q8IWY9 1227 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 CUTAO60888 179 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 KIF4AO95239 1232 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 USP17L8P0C7I0 530 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 DCUN1D2Q6PH85 259 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNX13-203ENST00000428135 DBNLQ9UJU6 430 aaKnown RBP10.82□□□□□ -0.68
SNX13-203ENST00000428135 PLXNC1O60486 1568 aa10.82□□□□□ -0.68
SNX13-203ENST00000428135 SH3BP5O60239 455 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 YARSP54577 528 aaKnown RBP10.81□□□□□ -0.68
SNX13-203ENST00000428135 DSCC1Q9BVC3 393 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 DDX25Q9UHL0 483 aaKnown RBP10.81□□□□□ -0.68
SNX13-203ENST00000428135 PCDHA12Q9UN75 941 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 LRRIQ4A6NIV6 560 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 ATP2A1O14983 1001 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 GEN1Q17RS7 908 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 CCDC93Q567U6 631 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 BLIDQ8IZY5 108 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 ZMYM4Q5VZL5 1548 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 ZEB2O60315 1214 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 CACNB1Q02641 598 aaPredicted RBP10.81□□□□□ -0.68
SNX13-203ENST00000428135 GNPTABQ3T906 1256 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 PLA2G4DQ86XP0 818 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 KSR1Q8IVT5 923 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 TAB3Q8N5C8 712 aaPredicted RBP10.81□□□□□ -0.68
SNX13-203ENST00000428135 TPCN1Q9ULQ1 816 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 PAXBP1Q9Y5B6 917 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 FANCCQ00597 558 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 FANCBQ8NB91 859 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 CCDC127Q96BQ5 260 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 RBSNQ9H1K0 784 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 CTTNBP2NLQ9P2B4 639 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 PCDHA1Q9Y5I3 950 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 ATP7BP35670 1465 aa10.81□□□□□ -0.68
SNX13-203ENST00000428135 BTBD18B2RXH4 712 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 K7ENM7 598 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 LPXNO60711 386 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 ZBTB16Q05516 673 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 AOC3Q16853 763 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 LLPHQ9BRT6 129 aaKnown RBP10.8□□□□□ -0.68
SNX13-203ENST00000428135 RAB3IL1Q8TBN0 382 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 SSH3Q8TE77 659 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 FAM204AQ9H8W3 233 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 SCAF8Q9UPN6 1271 aaKnown RBP10.8□□□□□ -0.68
SNX13-203ENST00000428135 DKC1O60832 514 aaKnown RBP eCLIP10.8□□□□□ -0.68
SNX13-203ENST00000428135 ABCB4P21439 1286 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 HSPA4P34932 840 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 OTUD6AQ7L8S5 288 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 ARFGAP3Q9NP61 516 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 NFE2L3Q9Y4A8 694 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 PLA2R1Q13018 1463 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 CALRP27797 417 aaKnown RBP10.8□□□□□ -0.68
SNX13-203ENST00000428135 LIG4P49917 911 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 ZNF589Q86UQ0 364 aaPredicted RBP10.8□□□□□ -0.68
SNX13-203ENST00000428135 NLRP10Q86W26 655 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 CERS3Q8IU89 383 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 LZTS2Q9BRK4 669 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 CBX8Q9HC52 389 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 RPS6KA4O75676 772 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 PTPN21Q16825 1174 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 CFAP58Q5T655 872 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 TYW1BQ6NUM6 668 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 SCYL2Q6P3W7 929 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 LCORLQ8N3X6 602 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 SREK1Q8WXA9 508 aaKnown RBP10.8□□□□□ -0.68
SNX13-203ENST00000428135 RABEP2Q9H5N1 569 aa10.8□□□□□ -0.68
SNX13-203ENST00000428135 MRPL11Q9Y3B7 192 aaKnown RBP10.8□□□□□ -0.68
SNX13-203ENST00000428135 C1orf167Q5SNV9 1468 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 CDC42BPBQ9Y5S2 1711 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 FAM196BA6NMK8 535 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 COA7Q96BR5 231 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 SLC39A2Q9NP94 309 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 SEPT9Q9UHD8 586 aaPredicted RBP10.79□□□□□ -0.68
SNX13-203ENST00000428135 CLTCL1P53675 1640 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 SHROOM2Q13796 1616 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 POLGP54098 1239 aaPredicted RBP10.79□□□□□ -0.68
SNX13-203ENST00000428135 MTX1Q13505 466 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 CNGA4Q8IV77 575 aa10.79□□□□□ -0.68
SNX13-203ENST00000428135 CCDC77Q9BR77 488 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms