RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 SUPT16HQ9Y5B9 1047 aaKnown RBP18.04■□□□□ 0.48
PHF1-204ENST00000427826 IGKV6D-41A0A0C4DH26 115 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 TRIM6-TRIM34B2RNG4 842 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 F5H6K3 240 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 TTLL1O95922 423 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 IGHDP01880 384 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 TSPY3P0CV98 308 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 TSPY8P0CW00 308 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 ERCC3P19447 782 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 KLRC3Q07444 240 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 MCMDC2Q4G0Z9 681 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 FAM83BQ5T0W9 1011 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 SAMD1Q6SPF0 538 aaPredicted RBP18.03■□□□□ 0.48
PHF1-204ENST00000427826 ABRAQ8N0Z2 381 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 NEDD1Q8NHV4 660 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 OSBPL3Q9H4L5 887 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 MTMR4Q9NYA4 1195 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 PPP1R9AQ9ULJ8 1098 aa18.03■□□□□ 0.48
PHF1-204ENST00000427826 PLXNB2O15031 1838 aa18.02■□□□□ 0.48
PHF1-204ENST00000427826 COPB2P35606 906 aa18.02■□□□□ 0.48
PHF1-204ENST00000427826 ALX1Q15699 326 aa18.02■□□□□ 0.48
PHF1-204ENST00000427826 CCL14Q16627 93 aa18.02■□□□□ 0.48
PHF1-204ENST00000427826 CCDC129Q6ZRS4 1044 aa18.02■□□□□ 0.48
PHF1-204ENST00000427826 NECAB2Q7Z6G3 386 aa18.02■□□□□ 0.48
PHF1-204ENST00000427826 NCAPG2Q86XI2 1143 aa18.02■□□□□ 0.48
PHF1-204ENST00000427826 CEP95Q96GE4 821 aa18.02■□□□□ 0.48
PHF1-204ENST00000427826 NR2E3Q9Y5X4 410 aa18.02■□□□□ 0.48
PHF1-204ENST00000427826 VWA5AO00534 786 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 NDUFB10O96000 172 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 ADORA2AP29274 412 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 MFAP1P55081 439 aaKnown RBP18.01■□□□□ 0.47
PHF1-204ENST00000427826 TFAP4Q01664 338 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 TMEM132BQ14DG7 1078 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 PRPF38AQ8NAV1 312 aaKnown RBP18.01■□□□□ 0.47
PHF1-204ENST00000427826 RILPL2Q969X0 211 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 SLF1Q9BQI6 1058 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 FBXO28Q9NVF7 368 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 ANAPC4Q9UJX5 808 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 OGDHLQ9ULD0 1010 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 PLIN4Q96Q06 1357 aa18.01■□□□□ 0.47
PHF1-204ENST00000427826 FCER1AP12319 257 aa18■□□□□ 0.47
PHF1-204ENST00000427826 STAT3P40763 770 aa18■□□□□ 0.47
PHF1-204ENST00000427826 RIOX2Q8IUF8 465 aa18■□□□□ 0.47
PHF1-204ENST00000427826 PLEKHM2Q8IWE5 1019 aa18■□□□□ 0.47
PHF1-204ENST00000427826 GMCL1P1Q8NEA9 526 aa18■□□□□ 0.47
PHF1-204ENST00000427826 PAWRQ96IZ0 340 aaKnown RBP18■□□□□ 0.47
PHF1-204ENST00000427826 FAM227BQ96M60 508 aa18■□□□□ 0.47
PHF1-204ENST00000427826 NBPF3Q9H094 633 aa18■□□□□ 0.47
PHF1-204ENST00000427826 H0YGN5 161 aa17.99■□□□□ 0.47
PHF1-204ENST00000427826 FOXP2O15409 715 aa17.99■□□□□ 0.47
PHF1-204ENST00000427826 FAM47AQ5JRC9 791 aa17.99■□□□□ 0.47
PHF1-204ENST00000427826 VPS53Q5VIR6 699 aa17.99■□□□□ 0.47
PHF1-204ENST00000427826 OLFML2BQ68BL8 750 aa17.99■□□□□ 0.47
PHF1-204ENST00000427826 NPLOC4Q8TAT6 608 aa17.99■□□□□ 0.47
PHF1-204ENST00000427826 FLRT1Q9NZU1 646 aa17.99■□□□□ 0.47
PHF1-204ENST00000427826 FEM1BQ9UK73 627 aa17.99■□□□□ 0.47
PHF1-204ENST00000427826 CTDP1Q9Y5B0 961 aaPredicted RBP17.99■□□□□ 0.47
PHF1-204ENST00000427826 A0A0D9SFI3 127 aa17.98■□□□□ 0.47
PHF1-204ENST00000427826 TSPY2A6NKD2 308 aa17.98■□□□□ 0.47
PHF1-204ENST00000427826 MSCO60682 206 aa17.98■□□□□ 0.47
PHF1-204ENST00000427826 ZBED4O75132 1171 aa17.98■□□□□ 0.47
PHF1-204ENST00000427826 CCND3P30281 292 aaPredicted RBP17.98■□□□□ 0.47
PHF1-204ENST00000427826 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
PHF1-204ENST00000427826 NUP88Q99567 741 aaPredicted RBP17.98■□□□□ 0.47
PHF1-204ENST00000427826 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.98■□□□□ 0.47
PHF1-204ENST00000427826 RLFQ13129 1914 aa17.98■□□□□ 0.47
PHF1-204ENST00000427826 GREB1LQ9C091 1923 aaPredicted RBP17.98■□□□□ 0.47
PHF1-204ENST00000427826 HIP1O00291 1037 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 ORC4O43929 436 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 EVI5O60447 810 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 FGAP02671 866 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
PHF1-204ENST00000427826 SDSP20132 328 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 CTDSPL2Q05D32 466 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 KCTD2Q14681 263 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 SLFN13Q68D06 897 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 LHX8Q68G74 356 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 REPS2Q8NFH8 660 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 MMP19Q99542 508 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 TEX13BQ9BXU2 312 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 ZNF214Q9UL59 606 aaPredicted RBP17.97■□□□□ 0.47
PHF1-204ENST00000427826 A0A0G2JMZ2 1700 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 ZMYM6O95789 1325 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 CCDC171Q6TFL3 1326 aa17.97■□□□□ 0.47
PHF1-204ENST00000427826 RANBP6O60518 1105 aaKnown RBP17.96■□□□□ 0.47
PHF1-204ENST00000427826 COBLO75128 1261 aa17.96■□□□□ 0.47
PHF1-204ENST00000427826 IGHA2P01877 340 aa17.96■□□□□ 0.47
PHF1-204ENST00000427826 FGRP09769 529 aa17.96■□□□□ 0.47
PHF1-204ENST00000427826 FDX1P10109 184 aa17.96■□□□□ 0.47
PHF1-204ENST00000427826 BMP3P12645 472 aa17.96■□□□□ 0.47
PHF1-204ENST00000427826 CNGA1P29973 690 aa17.96■□□□□ 0.47
PHF1-204ENST00000427826 CYP2C19P33261 490 aa17.96■□□□□ 0.47
PHF1-204ENST00000427826 LRRC47Q8N1G4 583 aaKnown RBP17.96■□□□□ 0.47
PHF1-204ENST00000427826 DIS3LQ8TF46 1054 aaKnown RBP17.96■□□□□ 0.47
PHF1-204ENST00000427826 C11orf49Q9H6J7 331 aa17.96■□□□□ 0.47
PHF1-204ENST00000427826 STX8Q9UNK0 236 aa17.96■□□□□ 0.47
PHF1-204ENST00000427826 ATP2A1O14983 1001 aa17.95■□□□□ 0.46
PHF1-204ENST00000427826 SLC34A2O95436 690 aa17.95■□□□□ 0.46
PHF1-204ENST00000427826 PCP11498 1178 aaKnown RBP17.95■□□□□ 0.46
PHF1-204ENST00000427826 HABP4Q5JVS0 413 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms