RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 MNAT1P51948 309 aa14.58□□□□□ -0.07
SPG11-202ENST00000427534 PPFIA1Q13136 1202 aa14.58□□□□□ -0.07
SPG11-202ENST00000427534 PAK1Q13153 545 aa14.58□□□□□ -0.07
SPG11-202ENST00000427534 UHMK1Q8TAS1 419 aaKnown RBP14.58□□□□□ -0.07
SPG11-202ENST00000427534 SMIM5Q71RC9 77 aa14.58□□□□□ -0.08
SPG11-202ENST00000427534 NME8Q8N427 588 aa14.58□□□□□ -0.08
SPG11-202ENST00000427534 RASGRP4Q8TDF6 673 aa14.58□□□□□ -0.08
SPG11-202ENST00000427534 POLGP54098 1239 aaPredicted RBP14.58□□□□□ -0.08
SPG11-202ENST00000427534 CCDC125Q86Z20 511 aa14.58□□□□□ -0.08
SPG11-202ENST00000427534 ZNF365Q70YC5 407 aa14.58□□□□□ -0.08
SPG11-202ENST00000427534 CSRNP1Q96S65 589 aa14.58□□□□□ -0.08
SPG11-202ENST00000427534 BUB1O43683 1085 aa14.58□□□□□ -0.08
SPG11-202ENST00000427534 CACNB3P54284 484 aa14.58□□□□□ -0.08
SPG11-202ENST00000427534 ATL3Q6DD88 541 aa14.58□□□□□ -0.08
SPG11-202ENST00000427534 MTRF1LQ9UGC7 380 aaKnown RBP14.58□□□□□ -0.08
SPG11-202ENST00000427534 MROH5Q6ZUA9 1318 aa14.58□□□□□ -0.08
SPG11-202ENST00000427534 E7EWF7 191 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 CETN3O15182 167 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 GMNNO75496 209 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 ICA1Q05084 483 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 RNASELQ05823 741 aaKnown RBP14.57□□□□□ -0.08
SPG11-202ENST00000427534 NAP1L3Q99457 506 aaPredicted RBP14.57□□□□□ -0.08
SPG11-202ENST00000427534 SGSM2O43147 1006 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 STK10O94804 968 aaKnown RBP14.57□□□□□ -0.08
SPG11-202ENST00000427534 U2AF1L4Q8WU68 220 aaKnown RBP14.57□□□□□ -0.08
SPG11-202ENST00000427534 METTL14Q9HCE5 456 aaKnown RBP14.57□□□□□ -0.08
SPG11-202ENST00000427534 BLMP54132 1417 aaPredicted RBP14.57□□□□□ -0.08
SPG11-202ENST00000427534 NEURL1BA8MQ27 555 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 LRFN2Q9ULH4 789 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 BUB1BO60566 1050 aaPredicted RBP14.57□□□□□ -0.08
SPG11-202ENST00000427534 RRAGAQ7L523 313 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 DISC1Q9NRI5 854 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 ZNF131P52739 623 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 ABI1Q8IZP0 508 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 SERTAD1Q9UHV2 236 aa14.57□□□□□ -0.08
SPG11-202ENST00000427534 INSRP06213 1382 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 MEIS1O00470 390 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 RIOK3O14730 519 aaKnown RBP14.56□□□□□ -0.08
SPG11-202ENST00000427534 LRRC43Q8N309 656 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 CCDC89Q8N998 374 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 PKNOX2Q96KN3 472 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 ATF7P17544 494 aaPredicted RBP14.56□□□□□ -0.08
SPG11-202ENST00000427534 KRT40Q6A162 431 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 POLR2MP0CAP2 368 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 IFNB1P01574 187 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 CAPN2P17655 700 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 SKIV2LQ15477 1246 aaKnown RBP14.56□□□□□ -0.08
SPG11-202ENST00000427534 ZNF827Q17R98 1081 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 REXO1Q8N1G1 1221 aaKnown RBP14.56□□□□□ -0.08
SPG11-202ENST00000427534 SLF1Q9BQI6 1058 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 C21orf2O43822 256 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 CEP85LQ5SZL2 805 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 RPUSD2Q8IZ73 545 aaKnown RBP14.56□□□□□ -0.08
SPG11-202ENST00000427534 TMEM87BQ96K49 555 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 ZNF668Q96K58 619 aaPredicted RBP14.56□□□□□ -0.08
SPG11-202ENST00000427534 VPS37BQ9H9H4 285 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 CD2APQ9Y5K6 639 aa14.56□□□□□ -0.08
SPG11-202ENST00000427534 ARHGEF10O15013 1369 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 ADKP55263 362 aaKnown RBP14.55□□□□□ -0.08
SPG11-202ENST00000427534 MTX1Q13505 466 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 ABCB5Q2M3G0 1257 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 OTUD6AQ7L8S5 288 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 GIPC1O14908 333 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 EIF4A1P60842 406 aaKnown RBP14.55□□□□□ -0.08
SPG11-202ENST00000427534 DDX25Q9UHL0 483 aaKnown RBP14.55□□□□□ -0.08
SPG11-202ENST00000427534 NR1I2O75469 434 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 MYL5Q02045 173 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 CCDC105Q8IYK2 499 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 CLIC6Q96NY7 704 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 NOX5Q96PH1 765 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 UTP11Q9Y3A2 253 aaKnown RBP14.55□□□□□ -0.08
SPG11-202ENST00000427534 TUBB4AP04350 444 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 CLUL1Q15846 466 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 NXNQ6DKJ4 435 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 CCDC121Q6ZUS5 278 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 KIAA1524Q8TCG1 905 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 DDX12PQ92771 950 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 PCIF1Q9H4Z3 704 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 SLC39A2Q9NP94 309 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 SMYD2Q9NRG4 433 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 U2AF2P26368 475 aaKnown RBP eCLIP14.55□□□□□ -0.087e-7■■■□□ 19.1
SPG11-202ENST00000427534 SLC5A4Q9NY91 659 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 PLEKHG3A1L390 1219 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 ANKS4BQ8N8V4 417 aa14.55□□□□□ -0.08
SPG11-202ENST00000427534 ZSCAN10Q96SZ4 725 aaPredicted RBP14.55□□□□□ -0.08
SPG11-202ENST00000427534 RPS6KC1Q96S38 1066 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 OPA1O60313 960 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 ZNF202O95125 648 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 PPP2R3AQ06190 1150 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 PROSER3Q2NL68 480 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 CTAGE3PQ8IX95 158 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 PIK3CAP42336 1068 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 PHKA1P46020 1223 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 TNNC1P63316 161 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 GKAP1Q5VSY0 366 aaPredicted RBP14.54□□□□□ -0.08
SPG11-202ENST00000427534 FBXO11Q86XK2 927 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 PLA2G4DQ86XP0 818 aa14.54□□□□□ -0.08
SPG11-202ENST00000427534 ANKRD42Q8N9B4 389 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms