RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 LRIT3Q3SXY7 679 aa12.27□□□□□ -0.45
HDLBP-213ENST00000427007 ZSCAN25Q6NSZ9 544 aa12.27□□□□□ -0.45
HDLBP-213ENST00000427007 DEFB123Q8N688 67 aa12.27□□□□□ -0.45
HDLBP-213ENST00000427007 MROH8Q9H579 483 aa12.27□□□□□ -0.45
HDLBP-213ENST00000427007 LTBP2Q14767 1821 aa12.27□□□□□ -0.45
HDLBP-213ENST00000427007 DNAH12Q6ZR08 3092 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 FCER1AP12319 257 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 RTP1P59025 263 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 FAM83BQ5T0W9 1011 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 SLC17A8Q8NDX2 589 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 MAML3Q96JK9 1138 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 KANSL2Q9H9L4 492 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 ECHDC1Q9NTX5 307 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 SLC5A4Q9NY91 659 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 ARPP21Q9UBL0 812 aaPredicted RBP12.26□□□□□ -0.45
HDLBP-213ENST00000427007 ATP11BQ9Y2G3 1177 aa12.26□□□□□ -0.45
HDLBP-213ENST00000427007 MINDY4BA8MYZ0 360 aa12.25□□□□□ -0.45
HDLBP-213ENST00000427007 KBTBD13C9JR72 458 aa12.25□□□□□ -0.45
HDLBP-213ENST00000427007 SEPT4O43236 478 aa12.25□□□□□ -0.45
HDLBP-213ENST00000427007 SLC25A27O95847 323 aa12.25□□□□□ -0.45
HDLBP-213ENST00000427007 PGK2P07205 417 aa12.25□□□□□ -0.45
HDLBP-213ENST00000427007 ABRAQ8N0Z2 381 aa12.25□□□□□ -0.45
HDLBP-213ENST00000427007 ARRDC4Q8NCT1 418 aa12.25□□□□□ -0.45
HDLBP-213ENST00000427007 STRBPQ96SI9 672 aaKnown RBP12.25□□□□□ -0.45
HDLBP-213ENST00000427007 MMP19Q99542 508 aa12.25□□□□□ -0.45
HDLBP-213ENST00000427007 NUP88Q99567 741 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-213ENST00000427007 LBHD1Q9BQE6 289 aaPredicted RBP12.25□□□□□ -0.45
HDLBP-213ENST00000427007 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.25□□□□□ -0.45
HDLBP-213ENST00000427007 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
HDLBP-213ENST00000427007 MYH4Q9Y623 1939 aa12.25□□□□□ -0.45
HDLBP-213ENST00000427007 GSG1L2A8MUP6 293 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 VWA5AO00534 786 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 RASA1P20936 1047 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 FAM47AQ5JRC9 791 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 GPR153Q6NV75 609 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 SLC39A5Q6ZMH5 540 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 RIOX2Q8IUF8 465 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 KBTBD3Q8NAB2 608 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 OSBP2Q969R2 916 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 FERMT2Q96AC1 680 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 MKNK2Q9HBH9 465 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 PRDM5Q9NQX1 630 aaPredicted RBP12.24□□□□□ -0.45
HDLBP-213ENST00000427007 PRKAG2Q9UGJ0 569 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 PPP1R9AQ9ULJ8 1098 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 ADAMTS5Q9UNA0 930 aa12.24□□□□□ -0.45
HDLBP-213ENST00000427007 STAT3P40763 770 aa12.23□□□□□ -0.45
HDLBP-213ENST00000427007 ADCYAP1R1P41586 468 aa12.23□□□□□ -0.45
HDLBP-213ENST00000427007 KCTD2Q14681 263 aa12.23□□□□□ -0.45
HDLBP-213ENST00000427007 LRRC41Q15345 812 aa12.23□□□□□ -0.45
HDLBP-213ENST00000427007 TRIM60Q495X7 471 aa12.23□□□□□ -0.45
HDLBP-213ENST00000427007 SBK1Q52WX2 424 aa12.23□□□□□ -0.45
HDLBP-213ENST00000427007 APPBP2Q92624 585 aa12.23□□□□□ -0.45
HDLBP-213ENST00000427007 ZNF214Q9UL59 606 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-213ENST00000427007 COL6A3P12111 3177 aa12.23□□□□□ -0.45
HDLBP-213ENST00000427007 ROBO3Q96MS0 1386 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 M0R2C6 588 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 RNF113AO15541 343 aaKnown RBP12.22□□□□□ -0.45
HDLBP-213ENST00000427007 GPAA1O43292 621 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 TAL1P17542 331 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-213ENST00000427007 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 TDO2P48775 406 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 ZNF792Q3KQV3 632 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 REPS2Q8NFH8 660 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 GPATCH3Q96I76 525 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 SLF1Q9BQI6 1058 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 TINF2Q9BSI4 451 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 EPB41L4AQ9HCS5 686 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-213ENST00000427007 MTMR10Q9NXD2 777 aa12.22□□□□□ -0.45
HDLBP-213ENST00000427007 F5H6K3 240 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 PRDM1O75626 825 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 NDUFB10O96000 172 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 PGK1P00558 417 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 APPP05067 770 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 RARBP10826 455 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 KLRC3Q07444 240 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 SNRNP48Q6IEG0 339 aaKnown RBP12.21□□□□□ -0.45
HDLBP-213ENST00000427007 GIMAP6Q6P9H5 292 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 LENG1Q96BZ8 264 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-213ENST00000427007 XPNPEP3Q9NQH7 507 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 NYAP2Q9P242 653 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 CLIP2Q9UDT6 1046 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 RIPK3Q9Y572 518 aa12.21□□□□□ -0.45
HDLBP-213ENST00000427007 SMCHD1A6NHR9 2005 aa12.21□□□□□ -0.46
HDLBP-213ENST00000427007 DLL1O00548 723 aa12.2□□□□□ -0.46
HDLBP-213ENST00000427007 SNX17Q15036 470 aa12.2□□□□□ -0.46
HDLBP-213ENST00000427007 SH3RF1Q7Z6J0 888 aa12.2□□□□□ -0.46
HDLBP-213ENST00000427007 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-213ENST00000427007 CPXCR1Q8N123 301 aa12.2□□□□□ -0.46
HDLBP-213ENST00000427007 BADQ92934 168 aa12.2□□□□□ -0.46
HDLBP-213ENST00000427007 KIFC2Q96AC6 838 aa12.2□□□□□ -0.46
HDLBP-213ENST00000427007 FAM161BQ96MY7 647 aa12.2□□□□□ -0.46
HDLBP-213ENST00000427007 SEC62Q99442 399 aaKnown RBP12.2□□□□□ -0.46
HDLBP-213ENST00000427007 PDLIM7Q9NR12 457 aa12.2□□□□□ -0.46
HDLBP-213ENST00000427007 STXBP5LQ9Y2K9 1186 aa12.2□□□□□ -0.46
HDLBP-213ENST00000427007 DIS3Q9Y2L1 958 aaKnown RBP12.2□□□□□ -0.46
HDLBP-213ENST00000427007 IGKV6D-41A0A0C4DH26 115 aa12.19□□□□□ -0.46
HDLBP-213ENST00000427007 ZFYP08048 801 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-213ENST00000427007 ZNF865P0CJ78 1059 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms