RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 KBTBD3Q8NAB2 608 aa15.57■□□□□ 0.08
VRK3-203ENST00000424804 SENP6Q9GZR1 1112 aaPredicted RBP15.57■□□□□ 0.08
VRK3-203ENST00000424804 MROH8Q9H579 483 aa15.57■□□□□ 0.08
VRK3-203ENST00000424804 KANSL2Q9H9L4 492 aa15.57■□□□□ 0.08
VRK3-203ENST00000424804 ARHGEF10LQ9HCE6 1279 aa15.57■□□□□ 0.08
VRK3-203ENST00000424804 ECHDC1Q9NTX5 307 aa15.57■□□□□ 0.08
VRK3-203ENST00000424804 IGKV6D-41A0A0C4DH26 115 aa15.56■□□□□ 0.08
VRK3-203ENST00000424804 GPR153Q6NV75 609 aa15.56■□□□□ 0.08
VRK3-203ENST00000424804 GPATCH3Q96I76 525 aa15.56■□□□□ 0.08
VRK3-203ENST00000424804 MAML3Q96JK9 1138 aa15.56■□□□□ 0.08
VRK3-203ENST00000424804 EPB41L4AQ9HCS5 686 aaPredicted RBP15.56■□□□□ 0.08
VRK3-203ENST00000424804 ZNF214Q9UL59 606 aaPredicted RBP15.56■□□□□ 0.08
VRK3-203ENST00000424804 PLXNA1Q9UIW2 1896 aa15.56■□□□□ 0.08
VRK3-203ENST00000424804 LTBP2Q14767 1821 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 ROBO3Q96MS0 1386 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 DNM1LO00429 736 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 VWA5AO00534 786 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 MSCO60682 206 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 CNGA1P29973 690 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 ZNF792Q3KQV3 632 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 GJC2Q5T442 439 aaPredicted RBP15.55■□□□□ 0.08
VRK3-203ENST00000424804 ANKRD45Q5TZF3 282 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 ANO1Q5XXA6 986 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 ZSCAN25Q6NSZ9 544 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 GIMAP6Q6P9H5 292 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 NCAPG2Q86XI2 1143 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 RIOX2Q8IUF8 465 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 TDHQ8IZJ6 230 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 PPP1R9AQ9ULJ8 1098 aa15.55■□□□□ 0.08
VRK3-203ENST00000424804 RNF113AO15541 343 aaKnown RBP15.54■□□□□ 0.08
VRK3-203ENST00000424804 SEPT4O43236 478 aa15.54■□□□□ 0.08
VRK3-203ENST00000424804 ATN1P54259 1190 aaPredicted RBP15.54■□□□□ 0.08
VRK3-203ENST00000424804 PLS1Q14651 629 aa15.54■□□□□ 0.08
VRK3-203ENST00000424804 FAM83BQ5T0W9 1011 aa15.54■□□□□ 0.08
VRK3-203ENST00000424804 APPBP2Q92624 585 aa15.54■□□□□ 0.08
VRK3-203ENST00000424804 SH2D4AQ9H788 454 aa15.54■□□□□ 0.08
VRK3-203ENST00000424804 ARPP21Q9UBL0 812 aaPredicted RBP15.54■□□□□ 0.08
VRK3-203ENST00000424804 A0A0C4DFX4 3053 aa15.54■□□□□ 0.08
VRK3-203ENST00000424804 MYH4Q9Y623 1939 aa15.53■□□□□ 0.08
VRK3-203ENST00000424804 M0R2C6 588 aa15.53■□□□□ 0.08
VRK3-203ENST00000424804 SLC25A27O95847 323 aa15.53■□□□□ 0.08
VRK3-203ENST00000424804 TAL1P17542 331 aaPredicted RBP15.53■□□□□ 0.08
VRK3-203ENST00000424804 MDM2Q00987 491 aaPredicted RBP15.53■□□□□ 0.08
VRK3-203ENST00000424804 SNX17Q15036 470 aa15.53■□□□□ 0.08
VRK3-203ENST00000424804 B4GALNT3Q6L9W6 998 aa15.53■□□□□ 0.08
VRK3-203ENST00000424804 SLC39A5Q6ZMH5 540 aa15.53■□□□□ 0.08
VRK3-203ENST00000424804 Q7L0L9 218 aa15.53■□□□□ 0.08
VRK3-203ENST00000424804 PI4K2BQ8TCG2 481 aa15.53■□□□□ 0.08
VRK3-203ENST00000424804 OTUD7AQ8TE49 926 aaPredicted RBP15.53■□□□□ 0.08
VRK3-203ENST00000424804 NUP88Q99567 741 aaPredicted RBP15.53■□□□□ 0.08
VRK3-203ENST00000424804 UBE2OQ9C0C9 1292 aaKnown RBP15.53■□□□□ 0.08
VRK3-203ENST00000424804 NYAP2Q9P242 653 aa15.53■□□□□ 0.08
VRK3-203ENST00000424804 GPAA1O43292 621 aa15.52■□□□□ 0.08
VRK3-203ENST00000424804 PGK2P07205 417 aa15.52■□□□□ 0.08
VRK3-203ENST00000424804 FCER1AP12319 257 aa15.52■□□□□ 0.08
VRK3-203ENST00000424804 STAT3P40763 770 aa15.52■□□□□ 0.08
VRK3-203ENST00000424804 RTP1P59025 263 aa15.52■□□□□ 0.08
VRK3-203ENST00000424804 LRRC41Q15345 812 aa15.52■□□□□ 0.08
VRK3-203ENST00000424804 STK11IPQ8N1F8 1099 aa15.52■□□□□ 0.08
VRK3-203ENST00000424804 MKL1Q969V6 931 aa15.52■□□□□ 0.08
VRK3-203ENST00000424804 RIPK3Q9Y572 518 aa15.52■□□□□ 0.08
VRK3-203ENST00000424804 SALL3Q9BXA9 1300 aa15.51■□□□□ 0.07
VRK3-203ENST00000424804 F5H6K3 240 aa15.51■□□□□ 0.07
VRK3-203ENST00000424804 FOXP2O15409 715 aa15.51■□□□□ 0.07
VRK3-203ENST00000424804 NDUFB10O96000 172 aa15.51■□□□□ 0.07
VRK3-203ENST00000424804 ZNF865P0CJ78 1059 aaPredicted RBP15.51■□□□□ 0.07
VRK3-203ENST00000424804 KLRC3Q07444 240 aa15.51■□□□□ 0.07
VRK3-203ENST00000424804 FAM47AQ5JRC9 791 aa15.51■□□□□ 0.07
VRK3-203ENST00000424804 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
VRK3-203ENST00000424804 ARRDC4Q8NCT1 418 aa15.51■□□□□ 0.07
VRK3-203ENST00000424804 SEC62Q99442 399 aaKnown RBP15.51■□□□□ 0.07
VRK3-203ENST00000424804 MMP19Q99542 508 aa15.51■□□□□ 0.07
VRK3-203ENST00000424804 RWDD1Q9H446 243 aaPredicted RBP15.51■□□□□ 0.07
VRK3-203ENST00000424804 MTMR10Q9NXD2 777 aa15.51■□□□□ 0.07
VRK3-203ENST00000424804 DIS3Q9Y2L1 958 aaKnown RBP15.51■□□□□ 0.07
VRK3-203ENST00000424804 DNAJC25-GNG10A0A024R161 153 aa15.5■□□□□ 0.07
VRK3-203ENST00000424804 MINDY4BA8MYZ0 360 aa15.5■□□□□ 0.07
VRK3-203ENST00000424804 HDAC1Q13547 482 aaPredicted RBP15.5■□□□□ 0.07
VRK3-203ENST00000424804 AAMPQ13685 434 aa15.5■□□□□ 0.07
VRK3-203ENST00000424804 AMOTL1Q8IY63 956 aa15.5■□□□□ 0.07
VRK3-203ENST00000424804 IFNL3Q8IZI9 196 aa15.5■□□□□ 0.07
VRK3-203ENST00000424804 DEFB123Q8N688 67 aa15.5■□□□□ 0.07
VRK3-203ENST00000424804 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
VRK3-203ENST00000424804 TINF2Q9BSI4 451 aa15.5■□□□□ 0.07
VRK3-203ENST00000424804 GOPCQ9HD26 462 aa15.5■□□□□ 0.07
VRK3-203ENST00000424804 TACC3Q9Y6A5 838 aa15.5■□□□□ 0.07
VRK3-203ENST00000424804 PATL2C9JE40 543 aaKnown RBP15.49■□□□□ 0.07
VRK3-203ENST00000424804 POTEB2H3BUK9 544 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 PRDM1O75626 825 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 ADCYAP1R1P41586 468 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 C1orf53Q5VUE5 145 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.49■□□□□ 0.07
VRK3-203ENST00000424804 SH3RF1Q7Z6J0 888 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 FGD4Q96M96 766 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 SLF1Q9BQI6 1058 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 SLC5A4Q9NY91 659 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 MTMR4Q9NYA4 1195 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 CLIP2Q9UDT6 1046 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 NRBP1Q9UHY1 535 aa15.49■□□□□ 0.07
VRK3-203ENST00000424804 MCM3APO60318 1980 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms