RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ZNF280CQ8ND82 737 aa15.66■□□□□ 0.1
PRPF39-202ENST00000424478 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
PRPF39-202ENST00000424478 EMILIN3Q9NT22 766 aa15.66■□□□□ 0.1
PRPF39-202ENST00000424478 KLRF2D3W0D1 207 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 GJB2P29033 226 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 CUL4AQ13619 759 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 NTRK3Q16288 839 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 TOMM70O94826 608 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 PARP1P09874 1014 aaKnown RBP15.65■□□□□ 0.1
PRPF39-202ENST00000424478 MKL1Q969V6 931 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 SLC10A4Q96EP9 437 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 USP17L10C9JJH3 530 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 FDPSP14324 419 aaKnown RBP15.65■□□□□ 0.1
PRPF39-202ENST00000424478 GRM4Q14833 912 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 LDLRAD1Q5T700 205 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 SMC1BQ8NDV3 1235 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 AFG3L2Q9Y4W6 797 aa15.65■□□□□ 0.1
PRPF39-202ENST00000424478 PASKQ96RG2 1323 aa15.64■□□□□ 0.09
PRPF39-202ENST00000424478 TRPM7Q96QT4 1865 aa15.64■□□□□ 0.09
PRPF39-202ENST00000424478 TMEM232C9JQI7 657 aa15.64■□□□□ 0.09
PRPF39-202ENST00000424478 DDAH1O94760 285 aa15.64■□□□□ 0.09
PRPF39-202ENST00000424478 MTA3Q9BTC8 594 aa15.64■□□□□ 0.09
PRPF39-202ENST00000424478 VCPKMTQ9H867 229 aa15.64■□□□□ 0.09
PRPF39-202ENST00000424478 ABT1Q9ULW3 272 aaKnown RBP15.64■□□□□ 0.09
PRPF39-202ENST00000424478 V9GY48 417 aaPredicted RBP15.64■□□□□ 0.09
PRPF39-202ENST00000424478 SMCHD1A6NHR9 2005 aa15.64■□□□□ 0.09
PRPF39-202ENST00000424478 TREML2Q5T2D2 321 aa15.64■□□□□ 0.09
PRPF39-202ENST00000424478 SMC3Q9UQE7 1217 aa15.64■□□□□ 0.09
PRPF39-202ENST00000424478 BACE1P56817 501 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 ZNF543Q08ER8 600 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 CCDC178Q5BJE1 867 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 NOL9Q5SY16 702 aaKnown RBP15.63■□□□□ 0.09
PRPF39-202ENST00000424478 PAXIP1Q6ZW49 1069 aaPredicted RBP15.63■□□□□ 0.09
PRPF39-202ENST00000424478 TMTC3Q6ZXV5 915 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 WNK4Q96J92 1243 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 CHAMP1Q96JM3 812 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 PALM3A6NDB9 673 aaPredicted RBP15.63■□□□□ 0.09
PRPF39-202ENST00000424478 VCAM1P19320 739 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 FOXD4L6Q3SYB3 417 aaPredicted RBP15.63■□□□□ 0.09
PRPF39-202ENST00000424478 FOXD4L3Q6VB84 417 aaPredicted RBP15.63■□□□□ 0.09
PRPF39-202ENST00000424478 GADL1Q6ZQY3 521 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 GPKOWQ92917 476 aaPredicted RBP eCLIP15.63■□□□□ 0.093e-6■■■■□ 23.6
PRPF39-202ENST00000424478 TANGO6Q9C0B7 1094 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 MAP3K11Q16584 847 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 KIFC2Q96AC6 838 aa15.63■□□□□ 0.09
PRPF39-202ENST00000424478 BMP3P12645 472 aa15.62■□□□□ 0.09
PRPF39-202ENST00000424478 FUT2Q10981 343 aa15.62■□□□□ 0.09
PRPF39-202ENST00000424478 SAPCD2Q86UD0 394 aa15.62■□□□□ 0.09
PRPF39-202ENST00000424478 GOPCQ9HD26 462 aa15.62■□□□□ 0.09
PRPF39-202ENST00000424478 ORC3Q9UBD5 711 aaPredicted RBP15.62■□□□□ 0.09
PRPF39-202ENST00000424478 CNTNAP5Q8WYK1 1306 aa15.62■□□□□ 0.09
PRPF39-202ENST00000424478 PTPRFP10586 1907 aa15.62■□□□□ 0.09
PRPF39-202ENST00000424478 SPDYE5A6NIY4 337 aa15.62■□□□□ 0.09
PRPF39-202ENST00000424478 ERO1BQ86YB8 467 aa15.62■□□□□ 0.09
PRPF39-202ENST00000424478 PIGSQ96S52 555 aa15.62■□□□□ 0.09
PRPF39-202ENST00000424478 ZIC5Q96T25 663 aa15.62■□□□□ 0.09
PRPF39-202ENST00000424478 RPAP3Q9H6T3 665 aaPredicted RBP15.62■□□□□ 0.09
PRPF39-202ENST00000424478 ECM2O94769 699 aaPredicted RBP15.61■□□□□ 0.09
PRPF39-202ENST00000424478 SNHG28P0DPA3 235 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 SHISA4Q96DD7 197 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 KIAA1683Q9H0B3 1180 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 MYH6P13533 1939 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 ZNF157P51786 506 aaPredicted RBP15.61■□□□□ 0.09
PRPF39-202ENST00000424478 ADGRF4Q8IZF3 695 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 GMCL1P1Q8NEA9 526 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 ADAMTS3O15072 1205 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 CALM1P0DP23 149 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 CALM2P0DP24 149 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 CALM3P0DP25 149 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 WDR18Q9BV38 432 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 AS3MTQ9HBK9 375 aa15.61■□□□□ 0.09
PRPF39-202ENST00000424478 KIF5BP33176 963 aa15.6■□□□□ 0.09
PRPF39-202ENST00000424478 IFNAR1P17181 557 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 SSRP1Q08945 709 aaKnown RBP15.59■□□□□ 0.09
PRPF39-202ENST00000424478 CCDC174Q6PII3 467 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 FAM184AQ8NB25 1140 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 SMARCC2Q8TAQ2 1214 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 RBM46Q8TBY0 533 aaKnown RBP15.59■□□□□ 0.09
PRPF39-202ENST00000424478 JMJD4Q9H9V9 463 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 VPS54Q9P1Q0 977 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 KCNJ14Q9UNX9 436 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.59■□□□□ 0.09
PRPF39-202ENST00000424478 FLOT1O75955 427 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 PPATQ06203 517 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 PKN1Q16512 942 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 FERMT3Q86UX7 667 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 VPS37CA5D8V6 355 aaPredicted RBP15.59■□□□□ 0.09
PRPF39-202ENST00000424478 PPP1R11O60927 126 aaPredicted RBP15.59■□□□□ 0.09
PRPF39-202ENST00000424478 CYP4F22Q6NT55 531 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 COA7Q96BR5 231 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 GMCL1Q96IK5 515 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 SH2D4AQ9H788 454 aa15.59■□□□□ 0.09
PRPF39-202ENST00000424478 USH1GQ495M9 461 aa15.58■□□□□ 0.08
PRPF39-202ENST00000424478 ASPRV1Q53RT3 343 aa15.58■□□□□ 0.08
PRPF39-202ENST00000424478 TYW1BQ6NUM6 668 aa15.58■□□□□ 0.08
PRPF39-202ENST00000424478 DCAF4Q8WV16 495 aa15.58■□□□□ 0.08
PRPF39-202ENST00000424478 RBM28Q9NW13 759 aaKnown RBP15.58■□□□□ 0.08
PRPF39-202ENST00000424478 PRR12Q9ULL5 1215 aa15.58■□□□□ 0.08
PRPF39-202ENST00000424478 CCDC196A0A1B0GTZ2 297 aa15.58■□□□□ 0.08
PRPF39-202ENST00000424478 FMNL1O95466 1100 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms