RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 NUP88Q99567 741 aaPredicted RBP21.73■■□□□ 1.07
HDAC6-205ENST00000423941 MTA3Q9BTC8 594 aa21.73■■□□□ 1.07
HDAC6-205ENST00000423941 TANGO6Q9C0B7 1094 aa21.73■■□□□ 1.07
HDAC6-205ENST00000423941 DOCK3Q8IZD9 2030 aa21.72■■□□□ 1.07
HDAC6-205ENST00000423941 COL11A1P12107 1806 aaPredicted RBP21.72■■□□□ 1.07
HDAC6-205ENST00000423941 SNHG28P0DPA3 235 aa21.72■■□□□ 1.07
HDAC6-205ENST00000423941 ANTXR2P58335 489 aa21.72■■□□□ 1.07
HDAC6-205ENST00000423941 Q3C1V9 767 aa21.72■■□□□ 1.07
HDAC6-205ENST00000423941 RNF20Q5VTR2 975 aa21.72■■□□□ 1.07
HDAC6-205ENST00000423941 USP26Q9BXU7 913 aa21.72■■□□□ 1.07
HDAC6-205ENST00000423941 FBXO28Q9NVF7 368 aa21.72■■□□□ 1.07
HDAC6-205ENST00000423941 FLOT1O75955 427 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 GNRH1P01148 92 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 ERVK-9P63128 1117 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 ERVK-24P63145 666 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 COL9A3Q14050 684 aaPredicted RBP21.71■■□□□ 1.07
HDAC6-205ENST00000423941 OTOP1Q7RTM1 612 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 MB21D1Q8N884 522 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 GPRC5AQ8NFJ5 357 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 IGDCC4Q8TDY8 1250 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 ARHGAP39Q9C0H5 1083 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 BTBD7Q9P203 1132 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 FEM1BQ9UK73 627 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 PPP1R9AQ9ULJ8 1098 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 TNKSO95271 1327 aa21.71■■□□□ 1.07
HDAC6-205ENST00000423941 PEX10O60683 326 aa21.7■■□□□ 1.06
HDAC6-205ENST00000423941 BMP3P12645 472 aa21.7■■□□□ 1.06
HDAC6-205ENST00000423941 MCCP23508 829 aa21.7■■□□□ 1.06
HDAC6-205ENST00000423941 PSMC4P43686 418 aa21.7■■□□□ 1.06
HDAC6-205ENST00000423941 ARHGEF6Q15052 776 aa21.7■■□□□ 1.06
HDAC6-205ENST00000423941 PKN2Q16513 984 aaKnown RBP21.7■■□□□ 1.06
HDAC6-205ENST00000423941 RALYLQ86SE5 291 aaKnown RBP21.7■■□□□ 1.06
HDAC6-205ENST00000423941 PRPF38AQ8NAV1 312 aaKnown RBP21.7■■□□□ 1.06
HDAC6-205ENST00000423941 DCAF4Q8WV16 495 aa21.7■■□□□ 1.06
HDAC6-205ENST00000423941 ATG4CQ96DT6 458 aa21.7■■□□□ 1.06
HDAC6-205ENST00000423941 TRIM47Q96LD4 638 aa21.7■■□□□ 1.06
HDAC6-205ENST00000423941 PDHBP11177 359 aa21.69■■□□□ 1.06
HDAC6-205ENST00000423941 KIF22Q14807 665 aa21.69■■□□□ 1.06
HDAC6-205ENST00000423941 BTNL9Q6UXG8 535 aa21.69■■□□□ 1.06
HDAC6-205ENST00000423941 REPS2Q8NFH8 660 aa21.69■■□□□ 1.06
HDAC6-205ENST00000423941 UBAC1Q9BSL1 405 aa21.69■■□□□ 1.06
HDAC6-205ENST00000423941 EFCC1Q9HA90 598 aa21.69■■□□□ 1.06
HDAC6-205ENST00000423941 HTTP42858 3142 aa21.68■■□□□ 1.06
HDAC6-205ENST00000423941 VWA5AO00534 786 aa21.68■■□□□ 1.06
HDAC6-205ENST00000423941 RAD21O60216 631 aa21.68■■□□□ 1.06
HDAC6-205ENST00000423941 SLC1A4P43007 532 aa21.68■■□□□ 1.06
HDAC6-205ENST00000423941 PNMA1Q8ND90 353 aa21.68■■□□□ 1.06
HDAC6-205ENST00000423941 SLF1Q9BQI6 1058 aa21.68■■□□□ 1.06
HDAC6-205ENST00000423941 GTF3C3Q9Y5Q9 886 aa21.68■■□□□ 1.06
HDAC6-205ENST00000423941 PLXNB2O15031 1838 aa21.68■■□□□ 1.06
HDAC6-205ENST00000423941 EXOSC10Q01780 885 aaKnown RBP21.67■■□□□ 1.06
HDAC6-205ENST00000423941 ADCK5Q3MIX3 580 aa21.67■■□□□ 1.06
HDAC6-205ENST00000423941 RASGRP2Q7LDG7 609 aa21.67■■□□□ 1.06
HDAC6-205ENST00000423941 FAM160B2Q86V87 743 aa21.67■■□□□ 1.06
HDAC6-205ENST00000423941 CHURC1Q8WUH1 139 aa21.67■■□□□ 1.06
HDAC6-205ENST00000423941 TRIM17Q9Y577 477 aa21.67■■□□□ 1.06
HDAC6-205ENST00000423941 SNX14Q9Y5W7 946 aa21.67■■□□□ 1.06
HDAC6-205ENST00000423941 WDR19Q8NEZ3 1342 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 TMEM232C9JQI7 657 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 ATP2A1O14983 1001 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 FDX1P10109 184 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 ZKSCAN1P17029 563 aaPredicted RBP21.66■■□□□ 1.06
HDAC6-205ENST00000423941 MCM5P33992 734 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 PRMT2P55345 433 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 FCGRTP55899 365 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 ZNF543Q08ER8 600 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 KRT32Q14532 448 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 TMEM132BQ14DG7 1078 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 IFIT1BQ5T764 474 aaKnown RBP21.66■■□□□ 1.06
HDAC6-205ENST00000423941 TMEM87BQ96K49 555 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 NEK1Q96PY6 1258 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 PAGR1Q9BTK6 254 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 PORCNQ9H237 461 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 KAT14Q9H8E8 782 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 ZNF214Q9UL59 606 aaPredicted RBP21.66■■□□□ 1.06
HDAC6-205ENST00000423941 PTPN22Q9Y2R2 807 aa21.66■■□□□ 1.06
HDAC6-205ENST00000423941 IFIT3O14879 490 aaKnown RBP21.65■■□□□ 1.06
HDAC6-205ENST00000423941 STAT2P52630 851 aa21.65■■□□□ 1.06
HDAC6-205ENST00000423941 FBXO46Q6PJ61 603 aaPredicted RBP21.65■■□□□ 1.06
HDAC6-205ENST00000423941 KCTD1Q719H9 257 aa21.65■■□□□ 1.06
HDAC6-205ENST00000423941 CHST3Q7LGC8 479 aa21.65■■□□□ 1.06
HDAC6-205ENST00000423941 SHCBP1Q8NEM2 672 aa21.65■■□□□ 1.06
HDAC6-205ENST00000423941 MCOLN1Q9GZU1 580 aa21.65■■□□□ 1.06
HDAC6-205ENST00000423941 SPATC1LQ9H0A9 340 aa21.65■■□□□ 1.06
HDAC6-205ENST00000423941 SLC38A10Q9HBR0 1119 aa21.65■■□□□ 1.06
HDAC6-205ENST00000423941 SENP2Q9HC62 589 aa21.65■■□□□ 1.06
HDAC6-205ENST00000423941 SRRDQ9UH36 339 aa21.65■■□□□ 1.06
HDAC6-205ENST00000423941 GJD2Q9UKL4 321 aa21.65■■□□□ 1.06
HDAC6-205ENST00000423941 PRC1O43663 620 aa21.64■■□□□ 1.05
HDAC6-205ENST00000423941 FMNL1O95466 1100 aaPredicted RBP21.64■■□□□ 1.05
HDAC6-205ENST00000423941 HOXD10P28358 340 aa21.64■■□□□ 1.05
HDAC6-205ENST00000423941 MAPK4P31152 587 aa21.64■■□□□ 1.05
HDAC6-205ENST00000423941 CCNA1P78396 465 aa21.64■■□□□ 1.05
HDAC6-205ENST00000423941 SART3Q15020 963 aaKnown RBP21.64■■□□□ 1.05
HDAC6-205ENST00000423941 MOV10L1Q9BXT6 1211 aaKnown RBP21.64■■□□□ 1.05
HDAC6-205ENST00000423941 LY9Q9HBG7 655 aa21.64■■□□□ 1.05
HDAC6-205ENST00000423941 LIFRP42702 1097 aa21.63■■□□□ 1.05
HDAC6-205ENST00000423941 WTAPQ15007 396 aa21.63■■□□□ 1.05
HDAC6-205ENST00000423941 GPATCH4Q5T3I0 446 aaKnown RBP21.63■■□□□ 1.05
HDAC6-205ENST00000423941 TTBK2Q6IQ55 1244 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms