RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SWAP70Q9UH65 585 aa20.29■□□□□ 0.84
CHCHD3-202ENST00000423635 ZNFX1Q9P2E3 1918 aaKnown RBP20.29■□□□□ 0.84
CHCHD3-202ENST00000423635 ROBO3Q96MS0 1386 aa20.29■□□□□ 0.84
CHCHD3-202ENST00000423635 PQBP1O60828 265 aaKnown RBP20.28■□□□□ 0.84
CHCHD3-202ENST00000423635 ZNF865P0CJ78 1059 aaPredicted RBP20.28■□□□□ 0.84
CHCHD3-202ENST00000423635 MMP19Q99542 508 aa20.28■□□□□ 0.84
CHCHD3-202ENST00000423635 ZNF576Q9H609 170 aa20.28■□□□□ 0.84
CHCHD3-202ENST00000423635 VCPKMTQ9H867 229 aa20.28■□□□□ 0.84
CHCHD3-202ENST00000423635 ARHGEF10LQ9HCE6 1279 aa20.28■□□□□ 0.84
CHCHD3-202ENST00000423635 WDR46O15213 610 aaKnown RBP20.27■□□□□ 0.84
CHCHD3-202ENST00000423635 ADAMTS4O75173 837 aa20.27■□□□□ 0.84
CHCHD3-202ENST00000423635 AKR1A1P14550 325 aa20.27■□□□□ 0.84
CHCHD3-202ENST00000423635 TAL1P17542 331 aaPredicted RBP20.27■□□□□ 0.84
CHCHD3-202ENST00000423635 COL9A1P20849 921 aa20.27■□□□□ 0.84
CHCHD3-202ENST00000423635 TTF1Q15361 905 aaPredicted RBP20.27■□□□□ 0.84
CHCHD3-202ENST00000423635 RIOX2Q8IUF8 465 aa20.27■□□□□ 0.84
CHCHD3-202ENST00000423635 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
CHCHD3-202ENST00000423635 SH2D4AQ9H788 454 aa20.27■□□□□ 0.84
CHCHD3-202ENST00000423635 DCP1AQ9NPI6 582 aaPredicted RBP20.27■□□□□ 0.84
CHCHD3-202ENST00000423635 TIMP1P01033 207 aa20.27■□□□□ 0.83
CHCHD3-202ENST00000423635 PGK2P07205 417 aa20.27■□□□□ 0.83
CHCHD3-202ENST00000423635 SLC9C2Q5TAH2 1124 aa20.27■□□□□ 0.83
CHCHD3-202ENST00000423635 ZKSCAN2Q63HK3 967 aa20.27■□□□□ 0.83
CHCHD3-202ENST00000423635 SLC44A5Q8NCS7 719 aa20.27■□□□□ 0.83
CHCHD3-202ENST00000423635 TIFAQ96CG3 184 aa20.27■□□□□ 0.83
CHCHD3-202ENST00000423635 DCDC2CA8MYV0 355 aa20.26■□□□□ 0.83
CHCHD3-202ENST00000423635 PDE6AP16499 860 aa20.26■□□□□ 0.83
CHCHD3-202ENST00000423635 ACLYP53396 1101 aa20.26■□□□□ 0.83
CHCHD3-202ENST00000423635 KCTD2Q14681 263 aa20.26■□□□□ 0.83
CHCHD3-202ENST00000423635 KLHDC9Q8NEP7 349 aa20.26■□□□□ 0.83
CHCHD3-202ENST00000423635 NUP133Q8WUM0 1156 aa20.26■□□□□ 0.83
CHCHD3-202ENST00000423635 SDR42E1Q8WUS8 393 aa20.26■□□□□ 0.83
CHCHD3-202ENST00000423635 ATXN2LQ8WWM7 1075 aaKnown RBP20.26■□□□□ 0.83
CHCHD3-202ENST00000423635 C1orf115Q9H7X2 142 aa20.26■□□□□ 0.83
CHCHD3-202ENST00000423635 MOXD2PA6NHM9 499 aa20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 CYP2D6P10635 497 aa20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 AKR1B1P15121 316 aa20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 STAT3P40763 770 aa20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 ICA1Q05084 483 aa20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 CCSAPQ6IQ19 270 aaPredicted RBP20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 MFSD5Q6N075 450 aa20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 MSL3Q8N5Y2 521 aaKnown RBP20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 DYNLL2Q96FJ2 89 aa20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 CCDC17Q96LX7 622 aa20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.25■□□□□ 0.837e-16■□□□□ 10.3
CHCHD3-202ENST00000423635 STARD7Q9NQZ5 370 aa20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 TBX21Q9UL17 535 aa20.25■□□□□ 0.83
CHCHD3-202ENST00000423635 TCRBV5S4A2TA0A5A2 114 aa20.24■□□□□ 0.83
CHCHD3-202ENST00000423635 VWA5AO00534 786 aa20.24■□□□□ 0.83
CHCHD3-202ENST00000423635 COPB2P35606 906 aa20.24■□□□□ 0.83
CHCHD3-202ENST00000423635 RASIP1Q5U651 963 aa20.24■□□□□ 0.83
CHCHD3-202ENST00000423635 C16orf59Q7L2K0 433 aa20.24■□□□□ 0.83
CHCHD3-202ENST00000423635 AACSQ86V21 672 aa20.24■□□□□ 0.83
CHCHD3-202ENST00000423635 CLEC10AQ8IUN9 316 aa20.24■□□□□ 0.83
CHCHD3-202ENST00000423635 ZNF214Q9UL59 606 aaPredicted RBP20.24■□□□□ 0.83
CHCHD3-202ENST00000423635 CNPY2Q9Y2B0 182 aa20.24■□□□□ 0.83
CHCHD3-202ENST00000423635 NAV1Q8NEY1 1877 aa20.23■□□□□ 0.83
CHCHD3-202ENST00000423635 ZNF532Q9HCE3 1301 aa20.23■□□□□ 0.83
CHCHD3-202ENST00000423635 PARP14Q460N5 1801 aa20.23■□□□□ 0.83
CHCHD3-202ENST00000423635 CDK7P50613 346 aa20.23■□□□□ 0.83
CHCHD3-202ENST00000423635 AKNAD1Q5T1N1 836 aa20.23■□□□□ 0.83
CHCHD3-202ENST00000423635 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
CHCHD3-202ENST00000423635 LCORLQ8N3X6 602 aa20.23■□□□□ 0.83
CHCHD3-202ENST00000423635 REPS2Q8NFH8 660 aa20.23■□□□□ 0.83
CHCHD3-202ENST00000423635 KCNA10Q16322 511 aa20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 TMEM240Q5SV17 173 aa20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 SAMD1Q6SPF0 538 aaPredicted RBP20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 LENG1Q96BZ8 264 aaPredicted RBP20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 GAS2L1Q99501 681 aaPredicted RBP20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 PBX4Q9BYU1 374 aa20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 ATP8A2Q9NTI2 1148 aa20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 FBXO28Q9NVF7 368 aa20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 FAM184BQ9ULE4 1060 aa20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 PPP1R9AQ9ULJ8 1098 aa20.22■□□□□ 0.83
CHCHD3-202ENST00000423635 ELP1O95163 1332 aa20.21■□□□□ 0.83
CHCHD3-202ENST00000423635 SYNRGQ9UMZ2 1314 aa20.21■□□□□ 0.83
CHCHD3-202ENST00000423635 SNAI1O95863 264 aaPredicted RBP20.21■□□□□ 0.83
CHCHD3-202ENST00000423635 PPIGQ13427 754 aaKnown RBP eCLIP20.21■□□□□ 0.832e-6■□□□□ 10.7
CHCHD3-202ENST00000423635 CCDC174Q6PII3 467 aa20.21■□□□□ 0.83
CHCHD3-202ENST00000423635 MAMDC4Q6UXC1 1216 aa20.21■□□□□ 0.83
CHCHD3-202ENST00000423635 ASB2Q96Q27 587 aa20.21■□□□□ 0.83
CHCHD3-202ENST00000423635 KANSL2Q9H9L4 492 aa20.21■□□□□ 0.83
CHCHD3-202ENST00000423635 MROH7Q68CQ1 1323 aa20.2■□□□□ 0.82
CHCHD3-202ENST00000423635 SYNGAP1Q96PV0 1343 aa20.2■□□□□ 0.82
CHCHD3-202ENST00000423635 PLXNA1Q9UIW2 1896 aa20.2■□□□□ 0.82
CHCHD3-202ENST00000423635 DUSP11O75319 330 aaKnown RBP20.2■□□□□ 0.82
CHCHD3-202ENST00000423635 EEF2P13639 858 aaKnown RBP20.2■□□□□ 0.82
CHCHD3-202ENST00000423635 CST5P28325 142 aaPredicted RBP20.2■□□□□ 0.82
CHCHD3-202ENST00000423635 CDK8P49336 464 aa20.2■□□□□ 0.82
CHCHD3-202ENST00000423635 C12orf60Q5U649 245 aa20.2■□□□□ 0.82
CHCHD3-202ENST00000423635 CEP85Q6P2H3 762 aa20.2■□□□□ 0.82
CHCHD3-202ENST00000423635 EXOC6BQ9Y2D4 811 aa20.2■□□□□ 0.82
CHCHD3-202ENST00000423635 COL11A1P12107 1806 aaPredicted RBP20.19■□□□□ 0.82
CHCHD3-202ENST00000423635 PBX2P40425 430 aa20.19■□□□□ 0.82
CHCHD3-202ENST00000423635 GLT1D1Q96MS3 346 aa20.19■□□□□ 0.82
CHCHD3-202ENST00000423635 ARMT1Q9H993 441 aa20.19■□□□□ 0.82
CHCHD3-202ENST00000423635 DNAJC25-GNG10A0A024R161 153 aa20.18■□□□□ 0.82
CHCHD3-202ENST00000423635 GRXCR1A8MXD5 290 aa20.18■□□□□ 0.82
CHCHD3-202ENST00000423635 PRKAB2O43741 272 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms