RNA–Protein interactions for RNA: ENST00000423575.5

LINC00539-202, long intergenic non-protein coding RNA 539, humanhuman

TSL 3 BASIC

Gene LINC00539, Length 699 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-202ENST00000423575 USP17L20D6RJB6 530 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 DDAH1O94760 285 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 BMP3P12645 472 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 HOXA7P31268 230 aaPredicted RBP14.16□□□□□ -0.14
LINC00539-202ENST00000423575 SLC1A4P43007 532 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 NEK4P51957 841 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 ZNF543Q08ER8 600 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 APOBRQ0VD83 1088 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 USP17L24Q0WX57 530 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 TROAPQ12815 778 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 CCDC96Q2M329 555 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 APOA5Q6Q788 366 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 CATIPQ7Z7H3 387 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 RAB11FIP4Q86YS3 637 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
LINC00539-202ENST00000423575 TMTC2Q8N394 836 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 TANGO6Q9C0B7 1094 aa14.16□□□□□ -0.14
LINC00539-202ENST00000423575 FRMPD2Q68DX3 1309 aaPredicted RBP14.15□□□□□ -0.14
LINC00539-202ENST00000423575 AK2P54819 239 aa14.15□□□□□ -0.14
LINC00539-202ENST00000423575 RABEP1Q15276 862 aa14.15□□□□□ -0.14
LINC00539-202ENST00000423575 CATSPERGQ6ZRH7 1159 aa14.15□□□□□ -0.14
LINC00539-202ENST00000423575 KCTD1Q719H9 257 aa14.15□□□□□ -0.14
LINC00539-202ENST00000423575 LARP6Q9BRS8 491 aaKnown RBP14.15□□□□□ -0.14
LINC00539-202ENST00000423575 ASCC2Q9H1I8 757 aaPredicted RBP14.15□□□□□ -0.14
LINC00539-202ENST00000423575 ZCCHC17Q9NP64 241 aaKnown RBP14.15□□□□□ -0.14
LINC00539-202ENST00000423575 FBXO28Q9NVF7 368 aa14.15□□□□□ -0.14
LINC00539-202ENST00000423575 ISY1Q9ULR0 285 aaKnown RBP14.15□□□□□ -0.14
LINC00539-202ENST00000423575 SLC45A1Q9Y2W3 748 aa14.15□□□□□ -0.14
LINC00539-202ENST00000423575 SLC12A7Q9Y666 1083 aa14.15□□□□□ -0.14
LINC00539-202ENST00000423575 GOLGA8BA8MQT2 603 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 GOLGA8HP0CJ92 632 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 CYP2C8P10632 490 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 RXRAP19793 462 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 EVCP57679 992 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 IRX3P78415 501 aaPredicted RBP14.14□□□□□ -0.15
LINC00539-202ENST00000423575 PABPC4Q13310 644 aaKnown RBP eCLIP14.14□□□□□ -0.15
LINC00539-202ENST00000423575 GRM4Q14833 912 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 OTUD7BQ6GQQ9 843 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 TTBK2Q6IQ55 1244 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 MICU3Q86XE3 530 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 NUP133Q8WUM0 1156 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 PARK7Q99497 189 aaKnown RBP14.14□□□□□ -0.15
LINC00539-202ENST00000423575 ALDH8A1Q9H2A2 487 aaPredicted RBP14.14□□□□□ -0.15
LINC00539-202ENST00000423575 GPCPD1Q9NPB8 672 aa14.14□□□□□ -0.15
LINC00539-202ENST00000423575 PCNTO95613 3336 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
LINC00539-202ENST00000423575 TMEM232C9JQI7 657 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 ZBTB43O43298 467 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 FLOT1O75955 427 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 PARP1P09874 1014 aaKnown RBP14.13□□□□□ -0.15
LINC00539-202ENST00000423575 OSBPP22059 807 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 TAF1CQ15572 869 aaPredicted RBP14.13□□□□□ -0.15
LINC00539-202ENST00000423575 ASPRV1Q53RT3 343 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 POTEEQ6S8J3 1075 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 NOL8Q76FK4 1167 aaKnown RBP14.13□□□□□ -0.15
LINC00539-202ENST00000423575 CCDC144CPQ8IYA2 1237 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 STAG2Q8N3U4 1231 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 P2RX7Q99572 595 aaKnown RBP14.13□□□□□ -0.15
LINC00539-202ENST00000423575 RNF186Q9NXI6 227 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 MAD2L2Q9UI95 211 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 PNMA3Q9UL41 463 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 PPP1R9AQ9ULJ8 1098 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 NAP1L2Q9ULW6 460 aaPredicted RBP14.13□□□□□ -0.15
LINC00539-202ENST00000423575 HPS5Q9UPZ3 1129 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 ADGRA2Q96PE1 1338 aa14.13□□□□□ -0.15
LINC00539-202ENST00000423575 PALM3A6NDB9 673 aaPredicted RBP14.12□□□□□ -0.15
LINC00539-202ENST00000423575 GOLGA8AA7E2F4 631 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 CA12O43570 354 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 ALDH1A1P00352 501 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 CALM1P0DP23 149 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 CALM2P0DP24 149 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 CALM3P0DP25 149 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 SLC16A2P36021 539 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 RCAN1P53805 252 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 HERVK_113P62684 666 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 CRHR2Q13324 411 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 SLC35G1Q2M3R5 365 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 GPATCH4Q5T3I0 446 aaKnown RBP14.12□□□□□ -0.15
LINC00539-202ENST00000423575 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
LINC00539-202ENST00000423575 SYNE3Q6ZMZ3 975 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 JMYQ8N9B5 988 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 ATG4CQ96DT6 458 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 MAP3K14Q99558 947 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 SLF1Q9BQI6 1058 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 CPVLQ9H3G5 476 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 R3HDMLQ9H3Y0 253 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 FEM1BQ9UK73 627 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 TPCN1Q9ULQ1 816 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 MYPNQ86TC9 1320 aa14.12□□□□□ -0.15
LINC00539-202ENST00000423575 NID2Q14112 1375 aa14.11□□□□□ -0.15
LINC00539-202ENST00000423575 PLA2G6O60733 806 aa14.11□□□□□ -0.15
LINC00539-202ENST00000423575 TRPA1O75762 1119 aa14.11□□□□□ -0.15
LINC00539-202ENST00000423575 LARGE1O95461 756 aa14.11□□□□□ -0.15
LINC00539-202ENST00000423575 PDIA3P30101 505 aaKnown RBP14.11□□□□□ -0.15
LINC00539-202ENST00000423575 DSG3P32926 999 aa14.11□□□□□ -0.15
LINC00539-202ENST00000423575 STAT2P52630 851 aa14.11□□□□□ -0.15
LINC00539-202ENST00000423575 MAP2K1Q02750 393 aaPredicted RBP14.11□□□□□ -0.15
LINC00539-202ENST00000423575 IKQ13123 557 aaPredicted RBP14.11□□□□□ -0.15
LINC00539-202ENST00000423575 COG2Q14746 738 aa14.11□□□□□ -0.15
LINC00539-202ENST00000423575 ANKRD1Q15327 319 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms