RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 OSBPP22059 807 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 HOXA7P31268 230 aaPredicted RBP10.89□□□□□ -0.67
PDGFC-202ENST00000422544 USP17L24Q0WX57 530 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 PABPC4Q13310 644 aaKnown RBP eCLIP10.89□□□□□ -0.67
PDGFC-202ENST00000422544 CRHR2Q13324 411 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 SEC23AQ15436 765 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 TAF1CQ15572 869 aaPredicted RBP10.89□□□□□ -0.67
PDGFC-202ENST00000422544 TMEM67Q5HYA8 995 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 IFIT1BQ5T764 474 aaKnown RBP10.89□□□□□ -0.67
PDGFC-202ENST00000422544 CATSPERGQ6ZRH7 1159 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 DHX32Q7L7V1 743 aaKnown RBP10.89□□□□□ -0.67
PDGFC-202ENST00000422544 GMCL1P1Q8NEA9 526 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 IGDCC4Q8TDY8 1250 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 TCEANC2Q96MN5 208 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 P2RX7Q99572 595 aaKnown RBP10.89□□□□□ -0.67
PDGFC-202ENST00000422544 LRRC2Q9BYS8 371 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 ASCC2Q9H1I8 757 aaPredicted RBP10.89□□□□□ -0.67
PDGFC-202ENST00000422544 SENP2Q9HC62 589 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 ZFYVE28Q9HCC9 887 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 ZCCHC17Q9NP64 241 aaKnown RBP10.89□□□□□ -0.67
PDGFC-202ENST00000422544 GPHNQ9NQX3 736 aaPredicted RBP10.89□□□□□ -0.67
PDGFC-202ENST00000422544 SAGE1Q9NXZ1 904 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 SYNPO2Q9UMS6 1093 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 HPS5Q9UPZ3 1129 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 SLC45A1Q9Y2W3 748 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 WDR46O15213 610 aaKnown RBP10.88□□□□□ -0.67
PDGFC-202ENST00000422544 PSMA5P28066 241 aa10.88□□□□□ -0.67
PDGFC-202ENST00000422544 IRX3P78415 501 aaPredicted RBP10.88□□□□□ -0.67
PDGFC-202ENST00000422544 EXOSC10Q01780 885 aaKnown RBP10.88□□□□□ -0.67
PDGFC-202ENST00000422544 WTAPQ15007 396 aa10.88□□□□□ -0.67
PDGFC-202ENST00000422544 SART3Q15020 963 aaKnown RBP10.88□□□□□ -0.67
PDGFC-202ENST00000422544 FAM83BQ5T0W9 1011 aa10.88□□□□□ -0.67
PDGFC-202ENST00000422544 RASGRP2Q7LDG7 609 aa10.88□□□□□ -0.67
PDGFC-202ENST00000422544 PARK7Q99497 189 aaKnown RBP10.88□□□□□ -0.67
PDGFC-202ENST00000422544 TANGO6Q9C0B7 1094 aa10.88□□□□□ -0.67
PDGFC-202ENST00000422544 KAT14Q9H8E8 782 aa10.88□□□□□ -0.67
PDGFC-202ENST00000422544 PNMA3Q9UL41 463 aa10.88□□□□□ -0.67
PDGFC-202ENST00000422544 ISY1Q9ULR0 285 aaKnown RBP10.88□□□□□ -0.67
PDGFC-202ENST00000422544 PHIPQ8WWQ0 1821 aa10.88□□□□□ -0.67
PDGFC-202ENST00000422544 ATAD5Q96QE3 1844 aa10.88□□□□□ -0.67
PDGFC-202ENST00000422544 SH2B2O14492 632 aaPredicted RBP10.87□□□□□ -0.67
PDGFC-202ENST00000422544 TLR2O60603 784 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 HMGB1P09429 215 aaKnown RBP10.87□□□□□ -0.67
PDGFC-202ENST00000422544 BMP3P12645 472 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 CASTP20810 708 aaKnown RBP10.87□□□□□ -0.67
PDGFC-202ENST00000422544 SLC1A4P43007 532 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 COG2Q14746 738 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 BLOC1S2Q6QNY1 142 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 PNMA1Q8ND90 353 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 SMCR8Q8TEV9 937 aaPredicted RBP10.87□□□□□ -0.67
PDGFC-202ENST00000422544 GMCL1Q96IK5 515 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 TMEM87BQ96K49 555 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 LY9Q9HBG7 655 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 FBXO28Q9NVF7 368 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 CPA4Q9UI42 421 aa10.87□□□□□ -0.67
PDGFC-202ENST00000422544 LAMA4Q16363 1823 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 GREB1LQ9C091 1923 aaPredicted RBP10.86□□□□□ -0.67
PDGFC-202ENST00000422544 PEX10O60683 326 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 FLOT1O75955 427 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 PDHBP11177 359 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 RPS6KB1P23443 525 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 ANAPC15P60006 121 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 HERVK_113P62684 666 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 CCDC96Q2M329 555 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 POTEEQ6S8J3 1075 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 C17orf99Q6UX52 265 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 NFXL1Q6ZNB6 911 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 KCTD1Q719H9 257 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 CTU1Q7Z7A3 348 aaKnown RBP10.86□□□□□ -0.67
PDGFC-202ENST00000422544 DCAF4Q8WV16 495 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 MTA3Q9BTC8 594 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 CFHR5Q9BXR6 569 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 BACH2Q9BYV9 841 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 C22orf23Q9BZE7 217 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 UPF3BQ9BZI7 483 aaKnown RBP10.86□□□□□ -0.67
PDGFC-202ENST00000422544 HOXC10Q9NYD6 342 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 MYH8P13535 1937 aa10.86□□□□□ -0.67
PDGFC-202ENST00000422544 FRMPD2Q68DX3 1309 aaPredicted RBP10.85□□□□□ -0.67
PDGFC-202ENST00000422544 WDR19Q8NEZ3 1342 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 UNC80Q8N2C7 3258 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 TMEM232C9JQI7 657 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 GPR25O00155 361 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 GOLGA8HP0CJ92 632 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 SNHG28P0DPA3 235 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 FGD1P98174 961 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 TTBK2Q6IQ55 1244 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 Q6ZUG5 572 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 RUFY3Q7L099 469 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 CATIPQ7Z7H3 387 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 TMTC2Q8N394 836 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 ANKRD13CQ8N6S4 541 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 KIFC2Q96AC6 838 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 ATG4CQ96DT6 458 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 TM6SF1Q9BZW5 370 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 GPCPD1Q9NPB8 672 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 RBPJLQ9UBG7 517 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 FEM1BQ9UK73 627 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 CYP46A1Q9Y6A2 500 aa10.85□□□□□ -0.67
PDGFC-202ENST00000422544 ADGRA2Q96PE1 1338 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms