RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 APOBRQ0VD83 1088 aa20.5■□□□□ 0.87
LINC00271-201ENST00000421378 PABPC4Q13310 644 aaKnown RBP eCLIP20.5■□□□□ 0.87
LINC00271-201ENST00000421378 CCDC96Q2M329 555 aa20.5■□□□□ 0.87
LINC00271-201ENST00000421378 GPAT2Q6NUI2 795 aa20.5■□□□□ 0.87
LINC00271-201ENST00000421378 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
LINC00271-201ENST00000421378 ANKRD23Q86SG2 305 aa20.5■□□□□ 0.87
LINC00271-201ENST00000421378 NUP133Q8WUM0 1156 aa20.5■□□□□ 0.87
LINC00271-201ENST00000421378 MYL10Q9BUA6 226 aa20.5■□□□□ 0.87
LINC00271-201ENST00000421378 TANGO6Q9C0B7 1094 aa20.5■□□□□ 0.87
LINC00271-201ENST00000421378 BRPF3Q9ULD4 1205 aa20.5■□□□□ 0.87
LINC00271-201ENST00000421378 IGF2BP3O00425 579 aaKnown RBP eCLIP20.49■□□□□ 0.87
LINC00271-201ENST00000421378 MICU3Q86XE3 530 aa20.49■□□□□ 0.87
LINC00271-201ENST00000421378 IFNL1Q8IU54 200 aa20.49■□□□□ 0.87
LINC00271-201ENST00000421378 FAM43AQ8N2R8 423 aa20.49■□□□□ 0.87
LINC00271-201ENST00000421378 IL27Q8NEV9 243 aa20.49■□□□□ 0.87
LINC00271-201ENST00000421378 NAP1L2Q9ULW6 460 aaPredicted RBP20.49■□□□□ 0.87
LINC00271-201ENST00000421378 SLC45A1Q9Y2W3 748 aa20.49■□□□□ 0.87
LINC00271-201ENST00000421378 USP17L15C9J2P7 530 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 USP17L13C9JLJ4 530 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 USP17L11C9JVI0 530 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 USP17L18D6R9N7 530 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 USP17L22D6RA61 530 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 USP17L17D6RBQ6 530 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 USP17L19D6RCP7 530 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 USP17L20D6RJB6 530 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 PDHXO00330 501 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 ST18O60284 1047 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 CALM1P0DP23 149 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 CALM2P0DP24 149 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 CALM3P0DP25 149 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 HOXA7P31268 230 aaPredicted RBP20.48■□□□□ 0.87
LINC00271-201ENST00000421378 USP17L24Q0WX57 530 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 OTUD7BQ6GQQ9 843 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 KCTD1Q719H9 257 aa20.48■□□□□ 0.87
LINC00271-201ENST00000421378 FRMPD2Q68DX3 1309 aaPredicted RBP20.48■□□□□ 0.87
LINC00271-201ENST00000421378 GOLGA8BA8MQT2 603 aa20.47■□□□□ 0.87
LINC00271-201ENST00000421378 ZBTB43O43298 467 aa20.47■□□□□ 0.87
LINC00271-201ENST00000421378 PARP1P09874 1014 aaKnown RBP20.47■□□□□ 0.87
LINC00271-201ENST00000421378 RXRAP19793 462 aa20.47■□□□□ 0.87
LINC00271-201ENST00000421378 EVCP57679 992 aa20.47■□□□□ 0.87
LINC00271-201ENST00000421378 ZNF543Q08ER8 600 aa20.47■□□□□ 0.87
LINC00271-201ENST00000421378 ASPRV1Q53RT3 343 aa20.47■□□□□ 0.87
LINC00271-201ENST00000421378 GPATCH4Q5T3I0 446 aaKnown RBP20.47■□□□□ 0.87
LINC00271-201ENST00000421378 ZCCHC17Q9NP64 241 aaKnown RBP20.47■□□□□ 0.87
LINC00271-201ENST00000421378 PNMA3Q9UL41 463 aa20.47■□□□□ 0.87
LINC00271-201ENST00000421378 FLOT1O75955 427 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 STAT2P52630 851 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 RCAN1P53805 252 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 IRX3P78415 501 aaPredicted RBP20.46■□□□□ 0.87
LINC00271-201ENST00000421378 GRM4Q14833 912 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 CATSPERGQ6ZRH7 1159 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 RAB11FIP4Q86YS3 637 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 DNAJC5GQ8N7S2 189 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 CTCFLQ8NI51 663 aaPredicted RBP20.46■□□□□ 0.87
LINC00271-201ENST00000421378 MAP3K14Q99558 947 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 LARP6Q9BRS8 491 aaKnown RBP20.46■□□□□ 0.87
LINC00271-201ENST00000421378 TMEM232C9JQI7 657 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 GOLGA8HP0CJ92 632 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 KIF5BP33176 963 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 IKQ13123 557 aaPredicted RBP20.46■□□□□ 0.87
LINC00271-201ENST00000421378 NOL8Q76FK4 1167 aaKnown RBP20.46■□□□□ 0.87
LINC00271-201ENST00000421378 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
LINC00271-201ENST00000421378 ASCC2Q9H1I8 757 aaPredicted RBP20.46■□□□□ 0.87
LINC00271-201ENST00000421378 ALDH1A1P00352 501 aa20.45■□□□□ 0.86
LINC00271-201ENST00000421378 OSBPP22059 807 aa20.45■□□□□ 0.86
LINC00271-201ENST00000421378 FANCBQ8NB91 859 aa20.45■□□□□ 0.86
LINC00271-201ENST00000421378 PARK7Q99497 189 aaKnown RBP20.45■□□□□ 0.86
LINC00271-201ENST00000421378 GPCPD1Q9NPB8 672 aa20.45■□□□□ 0.86
LINC00271-201ENST00000421378 MAD2L2Q9UI95 211 aa20.45■□□□□ 0.86
LINC00271-201ENST00000421378 FEM1BQ9UK73 627 aa20.45■□□□□ 0.86
LINC00271-201ENST00000421378 TPCN1Q9ULQ1 816 aa20.45■□□□□ 0.86
LINC00271-201ENST00000421378 GOLGA8AA7E2F4 631 aa20.44■□□□□ 0.86
LINC00271-201ENST00000421378 PDIA3P30101 505 aaKnown RBP20.44■□□□□ 0.86
LINC00271-201ENST00000421378 METAP2P50579 478 aaKnown RBP eCLIP20.44■□□□□ 0.86
LINC00271-201ENST00000421378 COG2Q14746 738 aa20.44■□□□□ 0.86
LINC00271-201ENST00000421378 STAG2Q8N3U4 1231 aa20.44■□□□□ 0.86
LINC00271-201ENST00000421378 SMCR8Q8TEV9 937 aaPredicted RBP20.44■□□□□ 0.86
LINC00271-201ENST00000421378 ZNF274Q96GC6 653 aaPredicted RBP20.44■□□□□ 0.86
LINC00271-201ENST00000421378 SLF1Q9BQI6 1058 aa20.44■□□□□ 0.86
LINC00271-201ENST00000421378 FBXO28Q9NVF7 368 aa20.44■□□□□ 0.86
LINC00271-201ENST00000421378 PARP14Q460N5 1801 aa20.44■□□□□ 0.86
LINC00271-201ENST00000421378 NID2Q14112 1375 aa20.43■□□□□ 0.86
LINC00271-201ENST00000421378 PALM3A6NDB9 673 aaPredicted RBP20.43■□□□□ 0.86
LINC00271-201ENST00000421378 PLA2G6O60733 806 aa20.43■□□□□ 0.86
LINC00271-201ENST00000421378 CYP2C8P10632 490 aa20.43■□□□□ 0.86
LINC00271-201ENST00000421378 TAF1CQ15572 869 aaPredicted RBP20.43■□□□□ 0.86
LINC00271-201ENST00000421378 RTN1Q16799 776 aa20.43■□□□□ 0.86
LINC00271-201ENST00000421378 TTBK2Q6IQ55 1244 aa20.43■□□□□ 0.86
LINC00271-201ENST00000421378 SAMD1Q6SPF0 538 aaPredicted RBP20.43■□□□□ 0.86
LINC00271-201ENST00000421378 FAM160B2Q86V87 743 aa20.43■□□□□ 0.86
LINC00271-201ENST00000421378 CHURC1Q8WUH1 139 aa20.43■□□□□ 0.86
LINC00271-201ENST00000421378 HPS5Q9UPZ3 1129 aa20.43■□□□□ 0.86
LINC00271-201ENST00000421378 MYPNQ86TC9 1320 aa20.42■□□□□ 0.86
LINC00271-201ENST00000421378 KLRF2D3W0D1 207 aa20.42■□□□□ 0.86
LINC00271-201ENST00000421378 PRPF38AQ8NAV1 312 aaKnown RBP20.42■□□□□ 0.86
LINC00271-201ENST00000421378 KIFC2Q96AC6 838 aa20.42■□□□□ 0.86
LINC00271-201ENST00000421378 RBM28Q9NW13 759 aaKnown RBP20.42■□□□□ 0.86
LINC00271-201ENST00000421378 HOXC10Q9NYD6 342 aa20.42■□□□□ 0.86
LINC00271-201ENST00000421378 PPP1R9AQ9ULJ8 1098 aa20.42■□□□□ 0.86
LINC00271-201ENST00000421378 RLFQ13129 1914 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms