RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 LACTBP83111 547 aaPredicted RBP24.24■■□□□ 1.47
HMGXB4-203ENST00000420166 KRT32Q14532 448 aa24.24■■□□□ 1.47
HMGXB4-203ENST00000420166 CD99L2Q8TCZ2 262 aa24.24■■□□□ 1.47
HMGXB4-203ENST00000420166 FBXO28Q9NVF7 368 aa24.24■■□□□ 1.47
HMGXB4-203ENST00000420166 HOXC10Q9NYD6 342 aa24.24■■□□□ 1.47
HMGXB4-203ENST00000420166 MORF4L1Q9UBU8 362 aa24.24■■□□□ 1.47
HMGXB4-203ENST00000420166 COL11A1P12107 1806 aaPredicted RBP24.24■■□□□ 1.47
HMGXB4-203ENST00000420166 IFIT3O14879 490 aaKnown RBP24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 DSG3P32926 999 aa24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 COL9A3Q14050 684 aaPredicted RBP24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 SART3Q15020 963 aaKnown RBP24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 RASGRP2Q7LDG7 609 aa24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 CHST3Q7LGC8 479 aa24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 DCAF4Q8WV16 495 aa24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 KAT14Q9H8E8 782 aa24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 TXNRD2Q9NNW7 524 aa24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 RBPJLQ9UBG7 517 aa24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 PPP1R9AQ9ULJ8 1098 aa24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 MTMR7Q9Y216 660 aa24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 RABGAP1Q9Y3P9 1069 aa24.23■■□□□ 1.47
HMGXB4-203ENST00000420166 MCM5P33992 734 aa24.22■■□□□ 1.47
HMGXB4-203ENST00000420166 KIF22Q14807 665 aa24.22■■□□□ 1.47
HMGXB4-203ENST00000420166 ADCK5Q3MIX3 580 aa24.22■■□□□ 1.47
HMGXB4-203ENST00000420166 IFIT1BQ5T764 474 aaKnown RBP24.22■■□□□ 1.47
HMGXB4-203ENST00000420166 PNMA1Q8ND90 353 aa24.22■■□□□ 1.47
HMGXB4-203ENST00000420166 CHMP4CQ96CF2 233 aa24.22■■□□□ 1.47
HMGXB4-203ENST00000420166 ATG4CQ96DT6 458 aa24.22■■□□□ 1.47
HMGXB4-203ENST00000420166 PAGR1Q9BTK6 254 aa24.22■■□□□ 1.47
HMGXB4-203ENST00000420166 SNX14Q9Y5W7 946 aa24.22■■□□□ 1.47
HMGXB4-203ENST00000420166 ERICH2A1L162 156 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 PRC1O43663 620 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 PEX10O60683 326 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 EIF5BO60841 1220 aaKnown RBP24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 CNMDO75829 334 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 CAP1Q01518 475 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 SAMD1Q6SPF0 538 aaPredicted RBP24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 GPRC5AQ8NFJ5 357 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 NEK1Q96PY6 1258 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 SLF1Q9BQI6 1058 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 MTA3Q9BTC8 594 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 ARHGAP39Q9C0H5 1083 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 FEM1BQ9UK73 627 aa24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 ISY1Q9ULR0 285 aaKnown RBP24.21■■□□□ 1.47
HMGXB4-203ENST00000420166 DOCK3Q8IZD9 2030 aa24.2■■□□□ 1.47
HMGXB4-203ENST00000420166 PDHBP11177 359 aa24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 ERVK-9P63128 1117 aa24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 ERVK-24P63145 666 aa24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 CCDC96Q2M329 555 aa24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 C8orf34Q49A92 452 aa24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 TMEM67Q5HYA8 995 aa24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 CTU1Q7Z7A3 348 aaKnown RBP24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 MB21D1Q8N884 522 aa24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 IGDCC4Q8TDY8 1250 aa24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 BTBD7Q9P203 1132 aa24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 ADAMTS5Q9UNA0 930 aa24.2■■□□□ 1.46
HMGXB4-203ENST00000420166 TMEM232C9JQI7 657 aa24.19■■□□□ 1.46
HMGXB4-203ENST00000420166 SNHG28P0DPA3 235 aa24.19■■□□□ 1.46
HMGXB4-203ENST00000420166 CTGFP29279 349 aa24.19■■□□□ 1.46
HMGXB4-203ENST00000420166 WTAPQ15007 396 aa24.19■■□□□ 1.46
HMGXB4-203ENST00000420166 KCTD1Q719H9 257 aa24.19■■□□□ 1.46
HMGXB4-203ENST00000420166 PRPF38AQ8NAV1 312 aaKnown RBP24.19■■□□□ 1.46
HMGXB4-203ENST00000420166 TMEM87BQ96K49 555 aa24.19■■□□□ 1.46
HMGXB4-203ENST00000420166 PLA2G6O60733 806 aa24.18■■□□□ 1.46
HMGXB4-203ENST00000420166 PSMC4P43686 418 aa24.18■■□□□ 1.46
HMGXB4-203ENST00000420166 STAT2P52630 851 aa24.18■■□□□ 1.46
HMGXB4-203ENST00000420166 ARHGEF6Q15052 776 aa24.18■■□□□ 1.46
HMGXB4-203ENST00000420166 Q3C1V9 767 aa24.18■■□□□ 1.46
HMGXB4-203ENST00000420166 COL13A1Q5TAT6 717 aaPredicted RBP24.18■■□□□ 1.46
HMGXB4-203ENST00000420166 FAM160B2Q86V87 743 aa24.18■■□□□ 1.46
HMGXB4-203ENST00000420166 CHURC1Q8WUH1 139 aa24.18■■□□□ 1.46
HMGXB4-203ENST00000420166 EFCC1Q9HA90 598 aa24.18■■□□□ 1.46
HMGXB4-203ENST00000420166 SENP2Q9HC62 589 aa24.18■■□□□ 1.46
HMGXB4-203ENST00000420166 FRMPD2Q68DX3 1309 aaPredicted RBP24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 WDR19Q8NEZ3 1342 aa24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 VWA5AO00534 786 aa24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 ECM2O94769 699 aaPredicted RBP24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 HMGB1P09429 215 aaKnown RBP24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 FCGRTP55899 365 aa24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 ZNF543Q08ER8 600 aa24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 IKQ13123 557 aaPredicted RBP24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 OTOP1Q7RTM1 612 aa24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 TRIM47Q96LD4 638 aa24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 JAKMIP1Q96N16 626 aaKnown RBP24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 LY9Q9HBG7 655 aa24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 GPHNQ9NQX3 736 aaPredicted RBP24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 TRIM17Q9Y577 477 aa24.17■■□□□ 1.46
HMGXB4-203ENST00000420166 SH2B2O14492 632 aaPredicted RBP24.16■■□□□ 1.46
HMGXB4-203ENST00000420166 SEC24BO95487 1268 aa24.16■■□□□ 1.46
HMGXB4-203ENST00000420166 CCNA1P78396 465 aa24.16■■□□□ 1.46
HMGXB4-203ENST00000420166 EXOSC10Q01780 885 aaKnown RBP24.16■■□□□ 1.46
HMGXB4-203ENST00000420166 DHX32Q7L7V1 743 aaKnown RBP24.16■■□□□ 1.46
HMGXB4-203ENST00000420166 KIFC2Q96AC6 838 aa24.16■■□□□ 1.46
HMGXB4-203ENST00000420166 GPCPD1Q9NPB8 672 aa24.16■■□□□ 1.46
HMGXB4-203ENST00000420166 FMNL1O95466 1100 aaPredicted RBP24.15■■□□□ 1.46
HMGXB4-203ENST00000420166 GPATCH4Q5T3I0 446 aaKnown RBP24.15■■□□□ 1.46
HMGXB4-203ENST00000420166 TTBK2Q6IQ55 1244 aa24.15■■□□□ 1.46
HMGXB4-203ENST00000420166 BTNL9Q6UXG8 535 aa24.15■■□□□ 1.46
HMGXB4-203ENST00000420166 REPS2Q8NFH8 660 aa24.15■■□□□ 1.46
HMGXB4-203ENST00000420166 LRRC2Q9BYS8 371 aa24.15■■□□□ 1.46
HMGXB4-203ENST00000420166 SPATC1LQ9H0A9 340 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms