RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 SUSD4Q5VX71 490 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 ZNF654Q8IZM8 581 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 HAUS7Q99871 368 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 ZKSCAN5Q9Y2L8 839 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 MEGF6O75095 1541 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 ALAS1P13196 640 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 ARL1P40616 181 aaPredicted RBP9.41□□□□□ -0.9
UBR4-206ENST00000419533 TUBB4BP68371 445 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 CCNA1P78396 465 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 SUPT20HL1Q3ZLR7 823 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 HERC4Q5GLZ8 1057 aaPredicted RBP9.41□□□□□ -0.9
UBR4-206ENST00000419533 CABP7Q86V35 215 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 IWS1Q96ST2 819 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 SRRTQ9BXP5 876 aaKnown RBP9.41□□□□□ -0.9
UBR4-206ENST00000419533 GREM2Q9H772 168 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 ZSWIM4Q9H7M6 989 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 SWAP70Q9UH65 585 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 MYO3BQ8WXR4 1341 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 PDE8BO95263 885 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 TBC1D8BQ0IIM8 1120 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 CCDC17Q96LX7 622 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 GPR108Q9NPR9 543 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 LTBP4Q8N2S1 1624 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 USP42Q9H9J4 1324 aaKnown RBP9.41□□□□□ -0.9
UBR4-206ENST00000419533 CSRNP2Q9H175 543 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 IFNKQ9P0W0 207 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 DNAI1Q9UI46 699 aa9.41□□□□□ -0.9
UBR4-206ENST00000419533 NRXN3Q9Y4C0 1643 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 USP14P54578 494 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 ITPK1Q13572 414 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 ABCB5Q2M3G0 1257 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 SPOUT1Q5T280 376 aaKnown RBP9.4□□□□□ -0.9
UBR4-206ENST00000419533 GALNT17Q6IS24 598 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 ZNF710Q8N1W2 664 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 SYNE4Q8N205 404 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 PHKBQ93100 1093 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 JAKMIP2Q96AA8 810 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 TM6SF1Q9BZW5 370 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 PSTPIP2Q9H939 334 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 TXNDC16Q9P2K2 825 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
UBR4-206ENST00000419533 P4HA1P13674 534 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 PAK1Q13153 545 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 MAEAQ7L5Y9 396 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 ANKRD35Q8N283 1001 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 CSGALNACT2Q8N6G5 542 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 PPM1EQ8WY54 764 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 NDC80O14777 642 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 DDAH1O94760 285 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 OSBPP22059 807 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 YWHAEP62258 255 aaKnown RBP9.4□□□□□ -0.9
UBR4-206ENST00000419533 UBE3CQ15386 1083 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 FBXO11Q86XK2 927 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 CRAMP1Q96RY5 1269 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 FAM169AQ9Y6X4 670 aa9.4□□□□□ -0.9
UBR4-206ENST00000419533 POLR2DO15514 142 aaKnown RBP9.4□□□□□ -0.91
UBR4-206ENST00000419533 EXOC3O60645 756 aa9.4□□□□□ -0.91
UBR4-206ENST00000419533 HSPA4P34932 840 aa9.4□□□□□ -0.91
UBR4-206ENST00000419533 LRRC24Q50LG9 513 aa9.4□□□□□ -0.91
UBR4-206ENST00000419533 ARMC9Q7Z3E5 817 aa9.4□□□□□ -0.91
UBR4-206ENST00000419533 NCAPG2Q86XI2 1143 aa9.4□□□□□ -0.91
UBR4-206ENST00000419533 DEPTORQ8TB45 409 aa9.4□□□□□ -0.91
UBR4-206ENST00000419533 MRPL44Q9H9J2 332 aaKnown RBP9.4□□□□□ -0.91
UBR4-206ENST00000419533 COPRSQ9NQ92 184 aa9.4□□□□□ -0.91
UBR4-206ENST00000419533 AKR1B15C9JRZ8 316 aaPredicted RBP9.39□□□□□ -0.91
UBR4-206ENST00000419533 H0YCG3 227 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 FAM47CQ5HY64 1035 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 SLFN12Q8IYM2 578 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 MLKLQ8NB16 471 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 GUCA1BQ9UMX6 200 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 AGTPBP1Q9UPW5 1226 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 A0A0G2JLW4 131 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 NR1I2O75469 434 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 FLOT1O75955 427 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 GCNT3O95395 438 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 BMS1Q14692 1282 aaKnown RBP9.39□□□□□ -0.91
UBR4-206ENST00000419533 ASIC2Q16515 512 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 KRT26Q7Z3Y9 468 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 ZBTB8OSQ8IWT0 167 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 ZNF274Q96GC6 653 aaPredicted RBP9.39□□□□□ -0.91
UBR4-206ENST00000419533 NAP1L3Q99457 506 aaPredicted RBP9.39□□□□□ -0.91
UBR4-206ENST00000419533 NUP58Q9BVL2 599 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 MTRF1LQ9UGC7 380 aaKnown RBP9.39□□□□□ -0.91
UBR4-206ENST00000419533 TRPC6Q9Y210 931 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 PRPF6O94906 941 aaKnown RBP9.39□□□□□ -0.91
UBR4-206ENST00000419533 RFX1P22670 979 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 TNNC1P63316 161 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 PPP1R7Q15435 360 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 PROSER3Q2NL68 480 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 C6orf163Q5TEZ5 329 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 SLFN13Q68D06 897 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 FAM107BQ9H098 131 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.39□□□□□ -0.918e-11■■■■□ 21.4
UBR4-206ENST00000419533 SYNRGQ9UMZ2 1314 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 PRAMEF22A3QJZ6 481 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 SOCS7O14512 581 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 RGL2O15211 777 aa9.39□□□□□ -0.91
UBR4-206ENST00000419533 ZNF853P0CG23 659 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms