RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 CPVLQ9H3G5 476 aa15.96■□□□□ 0.15
CHMP5-202ENST00000419016 ZSCAN16Q9H4T2 348 aaPredicted RBP15.96■□□□□ 0.15
CHMP5-202ENST00000419016 ARHGEF10LQ9HCE6 1279 aa15.96■□□□□ 0.15
CHMP5-202ENST00000419016 FRMPD2Q68DX3 1309 aaPredicted RBP15.96■□□□□ 0.15
CHMP5-202ENST00000419016 KIAA1755Q5JYT7 1200 aa15.96■□□□□ 0.15
CHMP5-202ENST00000419016 PNMA8AQ86V59 439 aaPredicted RBP15.96■□□□□ 0.15
CHMP5-202ENST00000419016 ATP6V1DQ9Y5K8 247 aa15.96■□□□□ 0.15
CHMP5-202ENST00000419016 BAZ2BQ9UIF8 2168 aaKnown RBP15.95■□□□□ 0.14
CHMP5-202ENST00000419016 SCG2P13521 617 aa15.95■□□□□ 0.14
CHMP5-202ENST00000419016 UBA5Q9GZZ9 404 aa15.95■□□□□ 0.14
CHMP5-202ENST00000419016 USP2O75604 605 aaPredicted RBP15.95■□□□□ 0.14
CHMP5-202ENST00000419016 KIF23Q02241 960 aaPredicted RBP15.95■□□□□ 0.14
CHMP5-202ENST00000419016 TTBK2Q6IQ55 1244 aa15.95■□□□□ 0.14
CHMP5-202ENST00000419016 SCYL3Q8IZE3 742 aa15.95■□□□□ 0.14
CHMP5-202ENST00000419016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.95■□□□□ 0.14
CHMP5-202ENST00000419016 MTMR8Q96EF0 704 aa15.95■□□□□ 0.14
CHMP5-202ENST00000419016 GLIS2Q9BZE0 524 aaPredicted RBP15.95■□□□□ 0.14
CHMP5-202ENST00000419016 FZD1Q9UP38 647 aa15.95■□□□□ 0.14
CHMP5-202ENST00000419016 ATAD5Q96QE3 1844 aa15.94■□□□□ 0.14
CHMP5-202ENST00000419016 MMP1P03956 469 aa15.94■□□□□ 0.14
CHMP5-202ENST00000419016 U2AF2P26368 475 aaKnown RBP eCLIP15.94■□□□□ 0.14
CHMP5-202ENST00000419016 SLC1A4P43007 532 aa15.94■□□□□ 0.14
CHMP5-202ENST00000419016 NOL9Q5SY16 702 aaKnown RBP15.94■□□□□ 0.14
CHMP5-202ENST00000419016 FAM173BQ6P4H8 233 aa15.94■□□□□ 0.14
CHMP5-202ENST00000419016 KCTD1Q719H9 257 aa15.94■□□□□ 0.14
CHMP5-202ENST00000419016 CCDC84Q86UT8 332 aaPredicted RBP15.94■□□□□ 0.14
CHMP5-202ENST00000419016 WRNIP1Q96S55 665 aa15.94■□□□□ 0.14
CHMP5-202ENST00000419016 PHF20Q9BVI0 1012 aa15.94■□□□□ 0.14
CHMP5-202ENST00000419016 VCPKMTQ9H867 229 aa15.94■□□□□ 0.14
CHMP5-202ENST00000419016 GPCPD1Q9NPB8 672 aa15.94■□□□□ 0.14
CHMP5-202ENST00000419016 KIF28PB7ZC32 967 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 TRIM29Q14134 588 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 NPY5RQ15761 445 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 BTNL9Q6UXG8 535 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 USP48Q86UV5 1035 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 ZKSCAN4Q969J2 545 aaPredicted RBP15.93■□□□□ 0.14
CHMP5-202ENST00000419016 WDR18Q9BV38 432 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 JMJD4Q9H9V9 463 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 SH3GLB2Q9NR46 395 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 VPS54Q9P1Q0 977 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 KCNJ14Q9UNX9 436 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 MYH6P13533 1939 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 DNM1Q05193 864 aaKnown RBP15.93■□□□□ 0.14
CHMP5-202ENST00000419016 CCDC96Q2M329 555 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 FOXD4L6Q3SYB3 417 aaPredicted RBP15.93■□□□□ 0.14
CHMP5-202ENST00000419016 FOXD4L3Q6VB84 417 aaPredicted RBP15.93■□□□□ 0.14
CHMP5-202ENST00000419016 FAM177A1Q8N128 213 aaPredicted RBP15.93■□□□□ 0.14
CHMP5-202ENST00000419016 CDCA5Q96FF9 252 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 KIAA1683Q9H0B3 1180 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 SH2D4AQ9H788 454 aa15.93■□□□□ 0.14
CHMP5-202ENST00000419016 POTEIP0CG38 1075 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 POTEJP0CG39 1038 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 BMP3P12645 472 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 PTPRAP18433 802 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 EAPPQ56P03 285 aaPredicted RBP15.92■□□□□ 0.14
CHMP5-202ENST00000419016 MCTP1Q6DN14 999 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 TYW1BQ6NUM6 668 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 BRAPQ7Z569 592 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 ADGRF4Q8IZF3 695 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 PIBF1Q8WXW3 757 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 NUP88Q99567 741 aaPredicted RBP15.92■□□□□ 0.14
CHMP5-202ENST00000419016 GOPCQ9HD26 462 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 PAPPA2Q9BXP8 1791 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 DOCK1Q14185 1865 aa15.92■□□□□ 0.14
CHMP5-202ENST00000419016 XBP1P17861 261 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 SLC16A2P36021 539 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 WWC2Q6AWC2 1192 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.91■□□□□ 0.14
CHMP5-202ENST00000419016 RRP36Q96EU6 259 aaKnown RBP15.91■□□□□ 0.14
CHMP5-202ENST00000419016 PIGSQ96S52 555 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 BARHL2Q9NY43 387 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 DDX11L8A8MPP1 907 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 STXBP3O00186 592 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 DIS3L2Q8IYB7 885 aaKnown RBP15.91■□□□□ 0.14
CHMP5-202ENST00000419016 SPICE1Q8N0Z3 855 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 TMEM87AQ8NBN3 555 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 FOXP1Q9H334 677 aaPredicted RBP15.91■□□□□ 0.14
CHMP5-202ENST00000419016 VAT1LQ9HCJ6 419 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 CNPY2Q9Y2B0 182 aa15.91■□□□□ 0.14
CHMP5-202ENST00000419016 BTBD18B2RXH4 712 aa15.9■□□□□ 0.14
CHMP5-202ENST00000419016 PLA2G6O60733 806 aa15.9■□□□□ 0.14
CHMP5-202ENST00000419016 MAP3K9P80192 1104 aa15.9■□□□□ 0.14
CHMP5-202ENST00000419016 MAP3K11Q16584 847 aa15.9■□□□□ 0.14
CHMP5-202ENST00000419016 RRAGCQ9HB90 399 aa15.9■□□□□ 0.14
CHMP5-202ENST00000419016 LMBRD1Q9NUN5 540 aa15.9■□□□□ 0.14
CHMP5-202ENST00000419016 PNMA6FA0A0J9YX94 578 aa15.89■□□□□ 0.13
CHMP5-202ENST00000419016 USP17L10C9JJH3 530 aa15.89■□□□□ 0.13
CHMP5-202ENST00000419016 PPP1R12BO60237 982 aaPredicted RBP15.89■□□□□ 0.13
CHMP5-202ENST00000419016 ATL3Q6DD88 541 aa15.89■□□□□ 0.13
CHMP5-202ENST00000419016 OXER1Q8TDS5 423 aa15.89■□□□□ 0.13
CHMP5-202ENST00000419016 GPKOWQ92917 476 aaPredicted RBP eCLIP15.89■□□□□ 0.13
CHMP5-202ENST00000419016 TNFRSF25Q93038 417 aa15.89■□□□□ 0.13
CHMP5-202ENST00000419016 PICK1Q9NRD5 415 aa15.89■□□□□ 0.13
CHMP5-202ENST00000419016 SNCAIPQ9Y6H5 919 aa15.89■□□□□ 0.13
CHMP5-202ENST00000419016 RAD21O60216 631 aa15.89■□□□□ 0.13
CHMP5-202ENST00000419016 PPP1R11O60927 126 aaPredicted RBP15.89■□□□□ 0.13
CHMP5-202ENST00000419016 KRT85P78386 507 aa15.89■□□□□ 0.13
CHMP5-202ENST00000419016 SAFBQ15424 915 aaKnown RBP eCLIP15.89■□□□□ 0.13
CHMP5-202ENST00000419016 HOMER1Q86YM7 354 aa15.89■□□□□ 0.13
CHMP5-202ENST00000419016 ZNF280CQ8ND82 737 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms