RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 FNBP4Q8N3X1 1017 aaPredicted RBP8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 OR8K1Q8NGG5 319 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 RNF217Q8TC41 542 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 ZIM3Q96PE6 472 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 GSDMAQ96QA5 445 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 CCT8L2Q96SF2 557 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 LRRC1Q9BTT6 524 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 TFR2Q9UP52 801 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 SRPRBQ9Y5M8 271 aaKnown RBP8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 TOGARAM1Q9Y4F4 1720 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 AFDNP55196 1824 aaKnown RBP8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 UBN2Q6ZU65 1347 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 GOLGA6L7A0A1B0GV03 622 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 CLNS1AP54105 237 aaKnown RBP8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 SPAG1Q07617 926 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 IFT88Q13099 833 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 NTRK3Q16288 839 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 NBPF20Q3BBV1 942 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 USP49Q70CQ1 688 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 NLRP14Q86W24 1093 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 DNAJC7Q99615 494 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 VPS16Q9H269 839 aa8.98□□□□□ -0.97
HMGXB4-202ENST00000418170 TNFRSF8P28908 595 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 IARSP41252 1262 aaKnown RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 HDLBPQ00341 1268 aaKnown RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 APBA1Q02410 837 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 MAP2K1Q02750 393 aaPredicted RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 RILPL1Q5EBL4 403 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 KCTD16Q68DU8 428 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 SH3RF1Q7Z6J0 888 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 CREG2Q8IUH2 290 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 SMYD4Q8IYR2 804 aaPredicted RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 FUKQ8N0W3 1084 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 HINFPQ9BQA5 517 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 ESF1Q9H501 851 aaKnown RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 TAOK2Q9UL54 1235 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 KRT14P02533 472 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 PDHBP11177 359 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 IDEP14735 1019 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 HDGFP51858 240 aaKnown RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 APOA5Q6Q788 366 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 MPRIPQ6WCQ1 1025 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 KIAA1328Q86T90 577 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 CCDC114Q96M63 670 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 NEUROD6Q96NK8 337 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 JADE2Q9NQC1 790 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 TTC26A0AVF1 554 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 RANBP6O60518 1105 aaKnown RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 ECM2O94769 699 aaPredicted RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 GRIK3Q13003 919 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 TTF1Q15361 905 aaPredicted RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 ZKSCAN8Q15776 578 aaPredicted RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 PURBQ96QR8 312 aaKnown RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 METTL22Q9BUU2 404 aaPredicted RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 CTNND2Q9UQB3 1225 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 MYH13Q9UKX3 1938 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 STK36Q9NRP7 1315 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 BTBD18B2RXH4 712 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 CLSTN1O94985 981 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 RXRAP19793 462 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 NR1D1P20393 614 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 TBC1D8BQ0IIM8 1120 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 DPYDQ12882 1025 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 WDR59Q6PJI9 974 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 IQCKQ8N0W5 287 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 NGDNQ8NEJ9 315 aaKnown RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 PAGE5Q96GU1 130 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 MYD88Q99836 296 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 LACRTQ9GZZ8 138 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 CSRNP2Q9H175 543 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 STRN4Q9NRL3 753 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 TAB2Q9NYJ8 693 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 STIM2Q9P246 746 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 SNX12Q9UMY4 172 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 EID1Q9Y6B2 187 aa8.97□□□□□ -0.97
HMGXB4-202ENST00000418170 ZNF213O14771 459 aa8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 IFIT1P09914 478 aaKnown RBP8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 SLC8A1P32418 973 aa8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 MDH1P40925 334 aaKnown RBP8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 AFMP43652 599 aa8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 SEC24CP53992 1094 aa8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 SLC8A3P57103 927 aa8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 TCP11X2Q5H9J9 407 aa8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 ZNF530Q6P9A1 599 aaPredicted RBP8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 SPATA4Q8NEY3 305 aa8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 GPR108Q9NPR9 543 aa8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 TPX2Q9ULW0 747 aaKnown RBP8.96□□□□□ -0.97
HMGXB4-202ENST00000418170 A0A087X0B3 334 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 RCCD1A6NED2 376 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 MMP1P03956 469 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 SARNPP82979 210 aaKnown RBP8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 CCDC121Q6ZUS5 278 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 C1orf131Q8NDD1 294 aaKnown RBP8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 LUC7L2Q9Y383 392 aaKnown RBP8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 PCDHB6Q9Y5E3 794 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 DCCP43146 1447 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 KLHL33A6NCF5 533 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 ZNF233A6NK53 670 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms