RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ANKRD45Q5TZF3 282 aa21.69■■□□□ 1.06
VCP-202ENST00000417448 ADAMTS19Q8TE59 1207 aa21.69■■□□□ 1.06
VCP-202ENST00000417448 ATXN2LQ8WWM7 1075 aaKnown RBP21.69■■□□□ 1.06
VCP-202ENST00000417448 SERPINB13Q9UIV8 391 aa21.69■■□□□ 1.06
VCP-202ENST00000417448 COL11A1P12107 1806 aaPredicted RBP21.69■■□□□ 1.06
VCP-202ENST00000417448 CERKLQ49MI3 558 aaPredicted RBP21.68■■□□□ 1.06
VCP-202ENST00000417448 MAML3Q96JK9 1138 aa21.68■■□□□ 1.06
VCP-202ENST00000417448 ASB2Q96Q27 587 aa21.68■■□□□ 1.06
VCP-202ENST00000417448 EHD4Q9H223 541 aa21.68■■□□□ 1.06
VCP-202ENST00000417448 RWDD1Q9H446 243 aaPredicted RBP21.68■■□□□ 1.06
VCP-202ENST00000417448 ANTXR1Q9H6X2 564 aa21.68■■□□□ 1.06
VCP-202ENST00000417448 PIH1D3Q9NQM4 214 aaKnown RBP21.68■■□□□ 1.06
VCP-202ENST00000417448 GBF1Q92538 1859 aa21.68■■□□□ 1.06
VCP-202ENST00000417448 TCF20Q9UGU0 1960 aaKnown RBP21.67■■□□□ 1.06
VCP-202ENST00000417448 A0A1W2PQ45 241 aaPredicted RBP21.67■■□□□ 1.06
VCP-202ENST00000417448 A0A1W2PQY0 241 aa21.67■■□□□ 1.06
VCP-202ENST00000417448 PGK1P00558 417 aa21.67■■□□□ 1.06
VCP-202ENST00000417448 SHMT1P34896 483 aa21.67■■□□□ 1.06
VCP-202ENST00000417448 PBX2P40425 430 aa21.67■■□□□ 1.06
VCP-202ENST00000417448 AAMPQ13685 434 aa21.67■■□□□ 1.06
VCP-202ENST00000417448 SHCBP1Q8NEM2 672 aa21.67■■□□□ 1.06
VCP-202ENST00000417448 XPNPEP3Q9NQH7 507 aa21.67■■□□□ 1.06
VCP-202ENST00000417448 THEGQ9P2T0 379 aa21.67■■□□□ 1.06
VCP-202ENST00000417448 A0A1W2PRG0 241 aa21.66■■□□□ 1.06
VCP-202ENST00000417448 FAAP100Q0VG06 881 aa21.66■■□□□ 1.06
VCP-202ENST00000417448 COG2Q14746 738 aa21.66■■□□□ 1.06
VCP-202ENST00000417448 MIGA1Q8NAN2 632 aa21.66■■□□□ 1.06
VCP-202ENST00000417448 FAM122AQ96E09 287 aa21.66■■□□□ 1.06
VCP-202ENST00000417448 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.66■■□□□ 1.061e-6■■■■□ 21.5
VCP-202ENST00000417448 BOLA2Q9H3K6 86 aa21.66■■□□□ 1.06
VCP-202ENST00000417448 TMEM39AQ9NV64 488 aa21.66■■□□□ 1.06
VCP-202ENST00000417448 NAV1Q8NEY1 1877 aa21.66■■□□□ 1.06
VCP-202ENST00000417448 GRXCR1A8MXD5 290 aa21.65■■□□□ 1.06
VCP-202ENST00000417448 MAP3K12Q12852 859 aa21.65■■□□□ 1.06
VCP-202ENST00000417448 SEPT2Q15019 361 aa21.65■■□□□ 1.06
VCP-202ENST00000417448 KIAA1755Q5JYT7 1200 aa21.65■■□□□ 1.06
VCP-202ENST00000417448 LENG1Q96BZ8 264 aaPredicted RBP21.65■■□□□ 1.06
VCP-202ENST00000417448 ZNF512BQ96KM6 892 aaPredicted RBP21.65■■□□□ 1.06
VCP-202ENST00000417448 UHRF1Q96T88 793 aaPredicted RBP21.65■■□□□ 1.06
VCP-202ENST00000417448 DNAJC2Q99543 621 aaKnown RBP21.65■■□□□ 1.06
VCP-202ENST00000417448 PBX4Q9BYU1 374 aa21.65■■□□□ 1.06
VCP-202ENST00000417448 PRDM12Q9H4Q4 367 aa21.65■■□□□ 1.06
VCP-202ENST00000417448 CENPBP07199 599 aaPredicted RBP21.64■■□□□ 1.05
VCP-202ENST00000417448 RARBP10826 455 aa21.64■■□□□ 1.05
VCP-202ENST00000417448 CYP7A1P22680 504 aa21.64■■□□□ 1.05
VCP-202ENST00000417448 ADGRE1Q14246 886 aa21.64■■□□□ 1.05
VCP-202ENST00000417448 AKNAD1Q5T1N1 836 aa21.64■■□□□ 1.05
VCP-202ENST00000417448 C16orf59Q7L2K0 433 aa21.64■■□□□ 1.05
VCP-202ENST00000417448 GAS2L1Q99501 681 aaPredicted RBP21.64■■□□□ 1.05
VCP-202ENST00000417448 TANGO6Q9C0B7 1094 aa21.64■■□□□ 1.05
VCP-202ENST00000417448 ROBO3Q96MS0 1386 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 TAL1P17542 331 aaPredicted RBP21.63■■□□□ 1.05
VCP-202ENST00000417448 USP5P45974 858 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 PLCD1P51178 756 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 EVX2Q03828 476 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 ANKRD33Q7Z3H0 272 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 RNF180Q86T96 592 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 NCAPG2Q86XI2 1143 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 ABRAQ8N0Z2 381 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 MROH8Q9H579 483 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 CABP5Q9NP86 173 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 SLC5A4Q9NY91 659 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 HOXC10Q9NYD6 342 aa21.63■■□□□ 1.05
VCP-202ENST00000417448 HOXD11P31277 338 aaPredicted RBP21.62■■□□□ 1.05
VCP-202ENST00000417448 MRPS5P82675 430 aaKnown RBP21.62■■□□□ 1.05
VCP-202ENST00000417448 PLS1Q14651 629 aa21.62■■□□□ 1.05
VCP-202ENST00000417448 CCDC85BQ15834 202 aaPredicted RBP21.62■■□□□ 1.05
VCP-202ENST00000417448 RASIP1Q5U651 963 aa21.62■■□□□ 1.05
VCP-202ENST00000417448 SLC44A5Q8NCS7 719 aa21.62■■□□□ 1.05
VCP-202ENST00000417448 TOX2Q96NM4 488 aa21.62■■□□□ 1.05
VCP-202ENST00000417448 LNPKQ9C0E8 428 aa21.62■■□□□ 1.05
VCP-202ENST00000417448 MYH7P12883 1935 aa21.61■■□□□ 1.05
VCP-202ENST00000417448 GOLIM4O00461 696 aa21.61■■□□□ 1.05
VCP-202ENST00000417448 ADAMTS4O75173 837 aa21.61■■□□□ 1.05
VCP-202ENST00000417448 TIMP1P01033 207 aa21.61■■□□□ 1.05
VCP-202ENST00000417448 SMC5Q8IY18 1101 aa21.61■■□□□ 1.05
VCP-202ENST00000417448 ATG4CQ96DT6 458 aa21.61■■□□□ 1.05
VCP-202ENST00000417448 NECAB3Q96P71 396 aaPredicted RBP21.61■■□□□ 1.05
VCP-202ENST00000417448 NRBP1Q9UHY1 535 aa21.61■■□□□ 1.05
VCP-202ENST00000417448 TBX21Q9UL17 535 aa21.61■■□□□ 1.05
VCP-202ENST00000417448 MYH8P13535 1937 aa21.61■■□□□ 1.05
VCP-202ENST00000417448 IDH1O75874 414 aaKnown RBP21.6■■□□□ 1.05
VCP-202ENST00000417448 PGK2P07205 417 aa21.6■■□□□ 1.05
VCP-202ENST00000417448 ATP5JP18859 108 aa21.6■■□□□ 1.05
VCP-202ENST00000417448 DSG3P32926 999 aa21.6■■□□□ 1.05
VCP-202ENST00000417448 TMEM240Q5SV17 173 aa21.6■■□□□ 1.05
VCP-202ENST00000417448 TTC6Q86TZ1 520 aa21.6■■□□□ 1.05
VCP-202ENST00000417448 ZNF865P0CJ78 1059 aaPredicted RBP21.59■■□□□ 1.05
VCP-202ENST00000417448 GABPAQ06546 454 aa21.59■■□□□ 1.05
VCP-202ENST00000417448 SLFNL1Q499Z3 407 aa21.59■■□□□ 1.05
VCP-202ENST00000417448 MFSD5Q6N075 450 aa21.59■■□□□ 1.05
VCP-202ENST00000417448 CCDC129Q6ZRS4 1044 aa21.59■■□□□ 1.05
VCP-202ENST00000417448 MB21D1Q8N884 522 aa21.59■■□□□ 1.05
VCP-202ENST00000417448 TINF2Q9BSI4 451 aa21.59■■□□□ 1.05
VCP-202ENST00000417448 ECHDC1Q9NTX5 307 aa21.59■■□□□ 1.05
VCP-202ENST00000417448 ZBTB47Q9UFB7 747 aaPredicted RBP21.59■■□□□ 1.05
VCP-202ENST00000417448 TRANK1O15050 2925 aa21.58■■□□□ 1.05
VCP-202ENST00000417448 DCDC2CA8MYV0 355 aa21.58■■□□□ 1.05
VCP-202ENST00000417448 IGSF3O75054 1194 aa21.58■■□□□ 1.05
VCP-202ENST00000417448 CHGBP05060 677 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms