RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 HTTP42858 3142 aa21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 MYH4Q9Y623 1939 aa21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 B4E1Z4 1266 aa21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 KDM4AO75164 1064 aa21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 CNMDO75829 334 aa21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 TOP1P11387 765 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 SLFN13Q68D06 897 aa21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 ARMC5Q96C12 935 aa21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 GMCL1Q96IK5 515 aa21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 NUP88Q99567 741 aaPredicted RBP21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 ANO2Q9NQ90 1003 aa21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 PPP1R9AQ9ULJ8 1098 aa21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 RBM8AQ9Y5S9 174 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-201ENST00000416295 TNRC18O15417 2968 aaPredicted RBP21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 PEX10O60683 326 aa21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 CYP21A2P08686 494 aa21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 PRKCZQ05513 592 aa21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 TRDNQ13061 729 aa21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 SAMD1Q6SPF0 538 aaPredicted RBP21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 RAET1EQ8TD07 263 aa21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 ATG4CQ96DT6 458 aa21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 SLF1Q9BQI6 1058 aa21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 LSG1Q9H089 658 aaKnown RBP21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 FBXO28Q9NVF7 368 aa21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 BTBD7Q9P203 1132 aa21.21■□□□□ 0.99
SEMA3B-201ENST00000416295 BMP3P12645 472 aa21.2■□□□□ 0.98
SEMA3B-201ENST00000416295 SLC1A4P43007 532 aa21.2■□□□□ 0.98
SEMA3B-201ENST00000416295 Q3C1V9 767 aa21.2■□□□□ 0.98
SEMA3B-201ENST00000416295 SLC9C1Q4G0N8 1177 aa21.2■□□□□ 0.98
SEMA3B-201ENST00000416295 CWC22Q9HCG8 908 aaKnown RBP21.2■□□□□ 0.98
SEMA3B-201ENST00000416295 FEM1BQ9UK73 627 aa21.2■□□□□ 0.98
SEMA3B-201ENST00000416295 ADAMTS5Q9UNA0 930 aa21.2■□□□□ 0.98
SEMA3B-201ENST00000416295 MGAMO43451 1857 aa21.2■□□□□ 0.98
SEMA3B-201ENST00000416295 A0A0G2JMZ2 1700 aa21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 FLT3LGP49771 235 aa21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 NBPF11Q86T75 865 aa21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 DGKHQ86XP1 1220 aa21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 PRPF38AQ8NAV1 312 aaKnown RBP21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 SOCS4Q8WXH5 440 aa21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 TMEM47Q9BQJ4 181 aa21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 SPATC1LQ9H0A9 340 aa21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 PORCNQ9H237 461 aa21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 ZSWIM5Q9P217 1185 aa21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 ISY1Q9ULR0 285 aaKnown RBP21.19■□□□□ 0.98
SEMA3B-201ENST00000416295 RLFQ13129 1914 aa21.18■□□□□ 0.98
SEMA3B-201ENST00000416295 VWA5AO00534 786 aa21.18■□□□□ 0.98
SEMA3B-201ENST00000416295 IRF5Q13568 498 aa21.18■□□□□ 0.98
SEMA3B-201ENST00000416295 RCSD1Q6JBY9 416 aa21.18■□□□□ 0.98
SEMA3B-201ENST00000416295 RALYLQ86SE5 291 aaKnown RBP21.18■□□□□ 0.98
SEMA3B-201ENST00000416295 NKX2-3Q8TAU0 364 aa21.18■□□□□ 0.98
SEMA3B-201ENST00000416295 ZSCAN10Q96SZ4 725 aaPredicted RBP21.18■□□□□ 0.98
SEMA3B-201ENST00000416295 ZKSCAN3Q9BRR0 538 aa21.18■□□□□ 0.98
SEMA3B-201ENST00000416295 UBAC1Q9BSL1 405 aa21.18■□□□□ 0.98
SEMA3B-201ENST00000416295 GABRQQ9UN88 632 aa21.18■□□□□ 0.98
SEMA3B-201ENST00000416295 E7EWF7 191 aa21.17■□□□□ 0.98
SEMA3B-201ENST00000416295 MCCP23508 829 aa21.17■□□□□ 0.98
SEMA3B-201ENST00000416295 STAT2P52630 851 aa21.17■□□□□ 0.98
SEMA3B-201ENST00000416295 PLS1Q14651 629 aa21.17■□□□□ 0.98
SEMA3B-201ENST00000416295 GPR142Q7Z601 462 aa21.17■□□□□ 0.98
SEMA3B-201ENST00000416295 PLEKHH3Q7Z736 793 aa21.17■□□□□ 0.98
SEMA3B-201ENST00000416295 FAM160B2Q86V87 743 aa21.17■□□□□ 0.98
SEMA3B-201ENST00000416295 SHCBP1Q8NEM2 672 aa21.17■□□□□ 0.98
SEMA3B-201ENST00000416295 NCOA7Q8NI08 942 aa21.17■□□□□ 0.98
SEMA3B-201ENST00000416295 DCAF4Q8WV16 495 aa21.17■□□□□ 0.98
SEMA3B-201ENST00000416295 RBBP6Q7Z6E9 1792 aaKnown RBP21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 IKQ13123 557 aaPredicted RBP21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 WDR78Q5VTH9 848 aa21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 SLAIN1Q8ND83 568 aa21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 CHURC1Q8WUH1 139 aa21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 ANKS1AQ92625 1134 aa21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 KIFC2Q96AC6 838 aa21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 NUDT12Q9BQG2 462 aa21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 MOV10L1Q9BXT6 1211 aaKnown RBP21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 CTDP1Q9Y5B0 961 aaPredicted RBP21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 IVNS1ABPQ9Y6Y0 642 aa21.16■□□□□ 0.98
SEMA3B-201ENST00000416295 PARP14Q460N5 1801 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 KIAA0100Q14667 2235 aaKnown RBP21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 TNKSO95271 1327 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 TMEM232C9JQI7 657 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 PLA2G6O60733 806 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 FDX1P10109 184 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 GRK4P32298 578 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 TMEM132BQ14DG7 1078 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 NECTIN1Q15223 517 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 CCDC96Q2M329 555 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 RNF20Q5VTR2 975 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 ENAHQ8N8S7 591 aaPredicted RBP21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 ZNF333Q96JL9 665 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 MROH8Q9H579 483 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 GJD2Q9UKL4 321 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 MTMR7Q9Y216 660 aa21.15■□□□□ 0.98
SEMA3B-201ENST00000416295 SLC27A2O14975 620 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 ADCY3O60266 1144 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 ZBED4O75132 1171 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 SLC25A27O95847 323 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 COPB2P35606 906 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 CREB3L3Q68CJ9 461 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 KCTD1Q719H9 257 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 RIOX2Q8IUF8 465 aa21.14■□□□□ 0.97
SEMA3B-201ENST00000416295 PXYLP1Q8TE99 480 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms