RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 SEC62Q99442 399 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-208ENST00000416159 PCDH10Q9P2E7 1040 aa20.99■□□□□ 0.95
PDLIM2-208ENST00000416159 SALL3Q9BXA9 1300 aa20.99■□□□□ 0.95
PDLIM2-208ENST00000416159 A0A0G2JMZ2 1700 aa20.98■□□□□ 0.95
PDLIM2-208ENST00000416159 OLFML2BQ68BL8 750 aa20.98■□□□□ 0.95
PDLIM2-208ENST00000416159 ABRAQ8N0Z2 381 aa20.98■□□□□ 0.95
PDLIM2-208ENST00000416159 PPP1R9AQ9ULJ8 1098 aa20.98■□□□□ 0.95
PDLIM2-208ENST00000416159 GREB1LQ9C091 1923 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-208ENST00000416159 MSCO60682 206 aa20.97■□□□□ 0.95
PDLIM2-208ENST00000416159 SLC3A2P08195 630 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-208ENST00000416159 TMEM132BQ14DG7 1078 aa20.97■□□□□ 0.95
PDLIM2-208ENST00000416159 FAM83BQ5T0W9 1011 aa20.97■□□□□ 0.95
PDLIM2-208ENST00000416159 NAPBQ9H115 298 aa20.97■□□□□ 0.95
PDLIM2-208ENST00000416159 FBXO28Q9NVF7 368 aa20.97■□□□□ 0.95
PDLIM2-208ENST00000416159 STAP2Q9UGK3 403 aa20.97■□□□□ 0.95
PDLIM2-208ENST00000416159 PARP14Q460N5 1801 aa20.97■□□□□ 0.95
PDLIM2-208ENST00000416159 VWA5AO00534 786 aa20.96■□□□□ 0.95
PDLIM2-208ENST00000416159 IGHA2P01877 340 aa20.96■□□□□ 0.95
PDLIM2-208ENST00000416159 CYP2C19P33261 490 aa20.96■□□□□ 0.95
PDLIM2-208ENST00000416159 FXR1P51114 621 aaKnown RBP eCLIP20.96■□□□□ 0.95
PDLIM2-208ENST00000416159 PDE4BQ07343 736 aa20.96■□□□□ 0.95
PDLIM2-208ENST00000416159 RIOX2Q8IUF8 465 aa20.96■□□□□ 0.95
PDLIM2-208ENST00000416159 EVI5LQ96CN4 794 aa20.96■□□□□ 0.95
PDLIM2-208ENST00000416159 CLIP2Q9UDT6 1046 aa20.96■□□□□ 0.95
PDLIM2-208ENST00000416159 ZNF236Q9UL36 1845 aa20.96■□□□□ 0.95
PDLIM2-208ENST00000416159 IGKV6D-41A0A0C4DH26 115 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 F5H6K3 240 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 COBLO75128 1261 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 PRDM1O75626 825 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 FCER1AP12319 257 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 CNGA1P29973 690 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 COPB2P35606 906 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 STAT3P40763 770 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 PDE1AP54750 535 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 KLRC3Q07444 240 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 MKL1Q969V6 931 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 RBM27Q9P2N5 1060 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 DDX20Q9UHI6 824 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 ALPK3Q96L96 1907 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 TRIOBPQ9H2D6 2365 aa20.95■□□□□ 0.94
PDLIM2-208ENST00000416159 ZNFX1Q9P2E3 1918 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-208ENST00000416159 PPARAQ07869 468 aa20.94■□□□□ 0.94
PDLIM2-208ENST00000416159 NEDD1Q8NHV4 660 aa20.94■□□□□ 0.94
PDLIM2-208ENST00000416159 SLF1Q9BQI6 1058 aa20.94■□□□□ 0.94
PDLIM2-208ENST00000416159 PRO3102Q9H379 93 aa20.94■□□□□ 0.94
PDLIM2-208ENST00000416159 MTMR4Q9NYA4 1195 aa20.94■□□□□ 0.94
PDLIM2-208ENST00000416159 SYNPO2Q9UMS6 1093 aa20.94■□□□□ 0.94
PDLIM2-208ENST00000416159 COL11A1P12107 1806 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-208ENST00000416159 TTLL1O95922 423 aa20.93■□□□□ 0.94
PDLIM2-208ENST00000416159 NDUFB10O96000 172 aa20.93■□□□□ 0.94
PDLIM2-208ENST00000416159 TSPY3P0CV98 308 aa20.93■□□□□ 0.94
PDLIM2-208ENST00000416159 TSPY8P0CW00 308 aa20.93■□□□□ 0.94
PDLIM2-208ENST00000416159 COL6A1P12109 1028 aa20.93■□□□□ 0.94
PDLIM2-208ENST00000416159 CYBAP13498 195 aa20.93■□□□□ 0.94
PDLIM2-208ENST00000416159 C7orf61Q8IZ16 206 aa20.93■□□□□ 0.94
PDLIM2-208ENST00000416159 CEP95Q96GE4 821 aa20.93■□□□□ 0.94
PDLIM2-208ENST00000416159 MMP19Q99542 508 aa20.93■□□□□ 0.94
PDLIM2-208ENST00000416159 TICAM2Q86XR7 235 aa20.92■□□□□ 0.94
PDLIM2-208ENST00000416159 PRPF38AQ8NAV1 312 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-208ENST00000416159 TRPV1Q8NER1 839 aa20.92■□□□□ 0.94
PDLIM2-208ENST00000416159 REPS2Q8NFH8 660 aa20.92■□□□□ 0.94
PDLIM2-208ENST00000416159 NUP88Q99567 741 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-208ENST00000416159 RWDD1Q9H446 243 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-208ENST00000416159 HELLSQ9NRZ9 838 aa20.92■□□□□ 0.94
PDLIM2-208ENST00000416159 ZNF214Q9UL59 606 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-208ENST00000416159 PFASO15067 1338 aa20.92■□□□□ 0.94
PDLIM2-208ENST00000416159 MYH4Q9Y623 1939 aa20.92■□□□□ 0.94
PDLIM2-208ENST00000416159 TFAP4Q01664 338 aa20.91■□□□□ 0.94
PDLIM2-208ENST00000416159 KCTD2Q14681 263 aa20.91■□□□□ 0.94
PDLIM2-208ENST00000416159 CCDC129Q6ZRS4 1044 aa20.91■□□□□ 0.94
PDLIM2-208ENST00000416159 MAML3Q96JK9 1138 aa20.91■□□□□ 0.94
PDLIM2-208ENST00000416159 PLIN4Q96Q06 1357 aa20.91■□□□□ 0.94
PDLIM2-208ENST00000416159 A0A1W2PPC1 479 aa20.9■□□□□ 0.94
PDLIM2-208ENST00000416159 PPP4R3BQ5MIZ7 849 aa20.9■□□□□ 0.94
PDLIM2-208ENST00000416159 GMCL1P1Q8NEA9 526 aa20.9■□□□□ 0.94
PDLIM2-208ENST00000416159 TEX13BQ9BXU2 312 aa20.9■□□□□ 0.94
PDLIM2-208ENST00000416159 FEM1BQ9UK73 627 aa20.9■□□□□ 0.94
PDLIM2-208ENST00000416159 ZMYND8Q9ULU4 1186 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-208ENST00000416159 DIS3Q9Y2L1 958 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-208ENST00000416159 CTDP1Q9Y5B0 961 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-208ENST00000416159 SEPT4O43236 478 aa20.89■□□□□ 0.93
PDLIM2-208ENST00000416159 ZBED4O75132 1171 aa20.89■□□□□ 0.93
PDLIM2-208ENST00000416159 FAM47AQ5JRC9 791 aa20.89■□□□□ 0.93
PDLIM2-208ENST00000416159 SMC5Q8IY18 1101 aa20.89■□□□□ 0.93
PDLIM2-208ENST00000416159 LNPKQ9C0E8 428 aa20.89■□□□□ 0.93
PDLIM2-208ENST00000416159 NRBP1Q9UHY1 535 aa20.89■□□□□ 0.93
PDLIM2-208ENST00000416159 FRMPD3Q5JV73 1810 aa20.89■□□□□ 0.93
PDLIM2-208ENST00000416159 ATP2A1O14983 1001 aa20.88■□□□□ 0.93
PDLIM2-208ENST00000416159 FOXP2O15409 715 aa20.88■□□□□ 0.93
PDLIM2-208ENST00000416159 ALX1Q15699 326 aa20.88■□□□□ 0.93
PDLIM2-208ENST00000416159 ZNF792Q3KQV3 632 aa20.88■□□□□ 0.93
PDLIM2-208ENST00000416159 SLFN13Q68D06 897 aa20.88■□□□□ 0.93
PDLIM2-208ENST00000416159 SNRNP48Q6IEG0 339 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-208ENST00000416159 LRRC47Q8N1G4 583 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-208ENST00000416159 ARRDC4Q8NCT1 418 aa20.88■□□□□ 0.93
PDLIM2-208ENST00000416159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.88■□□□□ 0.93
PDLIM2-208ENST00000416159 DNM1LO00429 736 aa20.87■□□□□ 0.93
PDLIM2-208ENST00000416159 PGK2P07205 417 aa20.87■□□□□ 0.93
PDLIM2-208ENST00000416159 CTDSPL2Q05D32 466 aa20.87■□□□□ 0.93
PDLIM2-208ENST00000416159 MCMDC2Q4G0Z9 681 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms