RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 BUB1BO60566 1050 aaPredicted RBP14.3□□□□□ -0.12
SCN1B-202ENST00000415950 GYG1P46976 350 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 PUM3Q15397 648 aaKnown RBP14.3□□□□□ -0.12
SCN1B-202ENST00000415950 SLC9C1Q4G0N8 1177 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 SARM1Q6SZW1 724 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 FCHSD1Q86WN1 690 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 VSIG1Q86XK7 387 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 PPFIBP2Q8ND30 876 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.3□□□□□ -0.12
SCN1B-202ENST00000415950 TBX22Q9Y458 520 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 RTL9Q8NET4 1388 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 DDX12PQ92771 950 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 CAPS2Q9BXY5 557 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 MKRN1Q9UHC7 482 aaKnown RBP14.3□□□□□ -0.12
SCN1B-202ENST00000415950 ZMYM6O95789 1325 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 COPB1P53618 953 aaKnown RBP14.3□□□□□ -0.12
SCN1B-202ENST00000415950 GSTO1P78417 241 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 KRT71Q3SY84 523 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 SETDB2Q96T68 719 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 SUGCTQ9HAC7 445 aa14.3□□□□□ -0.12
SCN1B-202ENST00000415950 WHAMMP3Q1A5X7 153 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 HERC4Q5GLZ8 1057 aaPredicted RBP14.29□□□□□ -0.12
SCN1B-202ENST00000415950 ANKRD7Q92527 254 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 MYO5CQ9NQX4 1742 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 AATKQ6ZMQ8 1374 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 PHLPP2Q6ZVD8 1323 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 CHMP2AO43633 222 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 IL2RBP14784 551 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 GUCY2DQ02846 1103 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 C2orf54Q08AI8 447 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 PPFIA1Q13136 1202 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 MAEAQ7L5Y9 396 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 NOX5Q96PH1 765 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 TXNDC16Q9P2K2 825 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 PAXIP1Q6ZW49 1069 aaPredicted RBP14.29□□□□□ -0.12
SCN1B-202ENST00000415950 MGARPQ8TDB4 240 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 STMN2Q93045 179 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 DNAI2Q9GZS0 605 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 ARHGEF5Q12774 1597 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 TNFAIP3P21580 790 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 ERCC5P28715 1186 aaPredicted RBP14.29□□□□□ -0.12
SCN1B-202ENST00000415950 TFAP4Q01664 338 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 IFT20Q8IY31 132 aa14.29□□□□□ -0.12
SCN1B-202ENST00000415950 NCOA3Q9Y6Q9 1424 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 ALDH3A1P30838 453 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 TECP42680 631 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 TRIM7Q9C029 511 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 HDAC6Q9UBN7 1215 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 YEATS2Q9ULM3 1422 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 ARID4AP29374 1257 aaPredicted RBP14.28□□□□□ -0.12
SCN1B-202ENST00000415950 MAP2K2P36507 400 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 PSMD6Q15008 389 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 CCDC65Q8IXS2 484 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 DPH5Q9H2P9 285 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 TSPOAP1O95153 1857 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 KRT5P13647 590 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 HSPA1LP34931 641 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 PPARAQ07869 468 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 EHHADHQ08426 723 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 BIRC3Q13489 604 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 E2F5Q15329 346 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 SEL1L2Q5TEA6 688 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 LPIN2Q92539 896 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 LRWD1Q9UFC0 647 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 ASIC3Q9UHC3 531 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 LRRIQ1Q96JM4 1722 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 ZFYVE16Q7Z3T8 1539 aa14.28□□□□□ -0.12
SCN1B-202ENST00000415950 KIF28PB7ZC32 967 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 PRR29P0C7W0 189 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 KLHL30Q0D2K2 578 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 IFT88Q13099 833 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 TCIRG1Q13488 830 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 TRIM14Q14142 442 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 RDH13Q8NBN7 331 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 ARHGEF2Q92974 986 aaKnown RBP14.27□□□□□ -0.12
SCN1B-202ENST00000415950 TSGA10Q9BZW7 698 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 HAUS4Q9H6D7 363 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 JRKLQ9Y4A0 524 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 RIMBP2O15034 1052 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 PHKG2P15735 406 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 ABCB4P21439 1286 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 RPL13P26373 211 aaKnown RBP14.27□□□□□ -0.12
SCN1B-202ENST00000415950 ZNF131P52739 623 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 RASSF7Q02833 373 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 FAM71BQ8TC56 605 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 ROBO2Q9HCK4 1378 aa14.27□□□□□ -0.12
SCN1B-202ENST00000415950 SH3TC1Q8TE82 1336 aa14.27□□□□□ -0.13
SCN1B-202ENST00000415950 KCNK3O14649 394 aa14.27□□□□□ -0.13
SCN1B-202ENST00000415950 PPM1FP49593 454 aaPredicted RBP14.27□□□□□ -0.13
SCN1B-202ENST00000415950 CABP7Q86V35 215 aa14.27□□□□□ -0.13
SCN1B-202ENST00000415950 SNX29Q8TEQ0 813 aa14.27□□□□□ -0.13
SCN1B-202ENST00000415950 RIN2Q8WYP3 895 aaPredicted RBP14.27□□□□□ -0.13
SCN1B-202ENST00000415950 PRDM4Q9UKN5 801 aa14.27□□□□□ -0.13
SCN1B-202ENST00000415950 GDAQ9Y2T3 454 aa14.27□□□□□ -0.13
SCN1B-202ENST00000415950 NLRP1Q9C000 1473 aa14.27□□□□□ -0.13
SCN1B-202ENST00000415950 ACTN4O43707 911 aaKnown RBP14.27□□□□□ -0.13
SCN1B-202ENST00000415950 NEDD9Q14511 834 aa14.27□□□□□ -0.13
SCN1B-202ENST00000415950 PPP1R21Q6ZMI0 780 aa14.27□□□□□ -0.13
SCN1B-202ENST00000415950 SREK1Q8WXA9 508 aaKnown RBP14.27□□□□□ -0.13
SCN1B-202ENST00000415950 CETN3O15182 167 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms