RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 SAGE1Q9NXZ1 904 aa18.13■□□□□ 0.49
CRAT-203ENST00000415948 USP17L15C9J2P7 530 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 USP17L13C9JLJ4 530 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 USP17L11C9JVI0 530 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 USP17L18D6R9N7 530 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 USP17L22D6RA61 530 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 USP17L17D6RBQ6 530 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 USP17L19D6RCP7 530 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 USP17L20D6RJB6 530 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 GOLGA8HP0CJ92 632 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 ZKSCAN1P17029 563 aaPredicted RBP18.12■□□□□ 0.49
CRAT-203ENST00000415948 RPS6KB1P23443 525 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 HERVK_113P62684 666 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 USP17L24Q0WX57 530 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 C17orf99Q6UX52 265 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 DHX32Q7L7V1 743 aaKnown RBP18.12■□□□□ 0.49
CRAT-203ENST00000415948 REPS2Q8NFH8 660 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 ATG4CQ96DT6 458 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 TTC14Q96N46 770 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 ZSWIM6Q9HCJ5 1215 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 BTBD7Q9P203 1132 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 BRPF3Q9ULD4 1205 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 SYNPO2Q9UMS6 1093 aa18.12■□□□□ 0.49
CRAT-203ENST00000415948 DOCK3Q8IZD9 2030 aa18.11■□□□□ 0.49
CRAT-203ENST00000415948 RXRAP19793 462 aa18.11■□□□□ 0.49
CRAT-203ENST00000415948 TOB2Q14106 344 aaPredicted RBP18.11■□□□□ 0.49
CRAT-203ENST00000415948 KRT32Q14532 448 aa18.11■□□□□ 0.49
CRAT-203ENST00000415948 WTAPQ15007 396 aa18.11■□□□□ 0.49
CRAT-203ENST00000415948 IFIT1BQ5T764 474 aaKnown RBP18.11■□□□□ 0.49
CRAT-203ENST00000415948 STAG2Q8N3U4 1231 aa18.11■□□□□ 0.49
CRAT-203ENST00000415948 GMCL1Q96IK5 515 aa18.11■□□□□ 0.49
CRAT-203ENST00000415948 PARK7Q99497 189 aaKnown RBP18.11■□□□□ 0.49
CRAT-203ENST00000415948 ARHGAP39Q9C0H5 1083 aa18.11■□□□□ 0.49
CRAT-203ENST00000415948 RBPJLQ9UBG7 517 aa18.11■□□□□ 0.49
CRAT-203ENST00000415948 WDR19Q8NEZ3 1342 aa18.1■□□□□ 0.49
CRAT-203ENST00000415948 TLR2O60603 784 aa18.1■□□□□ 0.49
CRAT-203ENST00000415948 ECM2O94769 699 aaPredicted RBP18.1■□□□□ 0.49
CRAT-203ENST00000415948 BMP3P12645 472 aa18.1■□□□□ 0.49
CRAT-203ENST00000415948 NT5C2P49902 561 aa18.1■□□□□ 0.49
CRAT-203ENST00000415948 SNAP25P60880 206 aa18.1■□□□□ 0.49
CRAT-203ENST00000415948 ZNF543Q08ER8 600 aa18.1■□□□□ 0.49
CRAT-203ENST00000415948 TROAPQ12815 778 aa18.1■□□□□ 0.49
CRAT-203ENST00000415948 Q3C1V9 767 aa18.1■□□□□ 0.49
CRAT-203ENST00000415948 SAMD1Q6SPF0 538 aaPredicted RBP18.1■□□□□ 0.49
CRAT-203ENST00000415948 LARP6Q9BRS8 491 aaKnown RBP18.1■□□□□ 0.49
CRAT-203ENST00000415948 BAZ2BQ9UIF8 2168 aaKnown RBP18.1■□□□□ 0.49
CRAT-203ENST00000415948 FLOT1O75955 427 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 ALDH1A1P00352 501 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 DSG3P32926 999 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 SLC16A2P36021 539 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 LBX1P52954 281 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 IRX3P78415 501 aaPredicted RBP18.09■□□□□ 0.49
CRAT-203ENST00000415948 BLOC1S2Q6QNY1 142 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 Q6ZUG5 572 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 NBPF11Q86T75 865 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 ZNF654Q8IZM8 581 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 ANKRD13CQ8N6S4 541 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 TMEM87BQ96K49 555 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 AGXT2Q9BYV1 514 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 KAT14Q9H8E8 782 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 ZFYVE28Q9HCC9 887 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 GPCPD1Q9NPB8 672 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 PPP1R9AQ9ULJ8 1098 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 ADAMTS5Q9UNA0 930 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 LCTP09848 1927 aa18.09■□□□□ 0.49
CRAT-203ENST00000415948 MYH6P13533 1939 aa18.08■□□□□ 0.49
CRAT-203ENST00000415948 TMEM232C9JQI7 657 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 GPR25O00155 361 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 SLC1A4P43007 532 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 RBM25P49756 843 aaKnown RBP18.08■□□□□ 0.48
CRAT-203ENST00000415948 APOBRQ0VD83 1088 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 CCDC96Q2M329 555 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 OTUD7BQ6GQQ9 843 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 RUFY3Q7L099 469 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 SGMS1Q86VZ5 419 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 ZNF296Q8WUU4 475 aaPredicted RBP18.08■□□□□ 0.48
CRAT-203ENST00000415948 DCAF4Q8WV16 495 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 C22orf23Q9BZE7 217 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 TM6SF1Q9BZW5 370 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 MAD2L2Q9UI95 211 aa18.08■□□□□ 0.48
CRAT-203ENST00000415948 HTTP42858 3142 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 OSBPP22059 807 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 LIFRP42702 1097 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 ANAPC15P60006 121 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 GRM4Q14833 912 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 LBX2Q6XYB7 198 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 CCDC144CPQ8IYA2 1237 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 SLF1Q9BQI6 1058 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 MTA3Q9BTC8 594 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 PAGR1Q9BTK6 254 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 UBA5Q9GZZ9 404 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 HPS5Q9UPZ3 1129 aa18.07■□□□□ 0.48
CRAT-203ENST00000415948 ZNF536O15090 1300 aa18.06■□□□□ 0.48
CRAT-203ENST00000415948 PABPC4Q13310 644 aaKnown RBP eCLIP18.06■□□□□ 0.48
CRAT-203ENST00000415948 COG2Q14746 738 aa18.06■□□□□ 0.48
CRAT-203ENST00000415948 TMEM132BQ14DG7 1078 aa18.06■□□□□ 0.48
CRAT-203ENST00000415948 CCDC178Q5BJE1 867 aa18.06■□□□□ 0.48
CRAT-203ENST00000415948 PPP4R3BQ5MIZ7 849 aa18.06■□□□□ 0.48
CRAT-203ENST00000415948 APOA5Q6Q788 366 aa18.06■□□□□ 0.48
CRAT-203ENST00000415948 BTNL9Q6UXG8 535 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms