RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 GMCL1Q96IK5 515 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 ZNF396Q96N95 335 aaPredicted RBP16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 GPCPD1Q9NPB8 672 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 SH3GLB2Q9NR46 395 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 PICK1Q9NRD5 415 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 CFAP45Q9UL16 551 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 WDR90Q96KV7 1748 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 hCG_1984214I3L0E3 225 aa16.46■□□□□ 0.23
HMGA1P1-201ENST00000415560 BMP3P12645 472 aa16.46■□□□□ 0.23
HMGA1P1-201ENST00000415560 NCLP19338 710 aaKnown RBP16.46■□□□□ 0.23
HMGA1P1-201ENST00000415560 KRT85P78386 507 aa16.46■□□□□ 0.23
HMGA1P1-201ENST00000415560 JAG1P78504 1218 aa16.46■□□□□ 0.23
HMGA1P1-201ENST00000415560 PKN1Q16512 942 aa16.46■□□□□ 0.23
HMGA1P1-201ENST00000415560 ZNF713Q8N859 430 aaPredicted RBP16.46■□□□□ 0.23
HMGA1P1-201ENST00000415560 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.23
HMGA1P1-201ENST00000415560 RIOX1Q9H6W3 641 aa16.46■□□□□ 0.23
HMGA1P1-201ENST00000415560 CLEC11AQ9Y240 323 aa16.46■□□□□ 0.23
HMGA1P1-201ENST00000415560 FRMPD2Q68DX3 1309 aaPredicted RBP16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 MMP1P03956 469 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 CALML3P27482 149 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 RESTQ13127 1097 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 SKOR2Q2VWA4 1001 aaPredicted RBP16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 PRAMEF18Q5VWM3 479 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 SCYL3Q8IZE3 742 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 WRNIP1Q96S55 665 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 FEZ1Q99689 392 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 UBA5Q9GZZ9 404 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
HMGA1P1-201ENST00000415560 VEGFAP15692 232 aaPredicted RBP16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 IREB2P48200 963 aaKnown RBP16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 USP14P54578 494 aa16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 NLRP5P59047 1200 aa16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 SHROOM1Q2M3G4 852 aaPredicted RBP16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 FOXD4L6Q3SYB3 417 aaPredicted RBP16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 FOXD4L3Q6VB84 417 aaPredicted RBP16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 KLRG1Q96E93 195 aa16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 SCAND2PQ9GZW5 306 aaPredicted RBP16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 FOXP1Q9H334 677 aaPredicted RBP16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 VCPKMTQ9H867 229 aa16.44■□□□□ 0.22
HMGA1P1-201ENST00000415560 hCG_1642624A0A1W2PR95 340 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 A0A1W2PRG0 241 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 NDUFB10O96000 172 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 ECE1P42892 770 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 MAP3K9P80192 1104 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 KIF23Q02241 960 aaPredicted RBP16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 TRAF1Q13077 416 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 NBR1Q14596 966 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 GALNT17Q6IS24 598 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 KCTD1Q719H9 257 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 CHURC1Q8WUH1 139 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 PIBF1Q8WXW3 757 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 PHF20Q9BVI0 1012 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 DOCK1Q14185 1865 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 TCHHQ07283 1943 aa16.43■□□□□ 0.22
HMGA1P1-201ENST00000415560 PNMA6FA0A0J9YX94 578 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 POTECB2RU33 542 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 USP17L10C9JJH3 530 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 TMEM232C9JQI7 657 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 CYTH3O43739 400 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 USP2O75604 605 aaPredicted RBP16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 U2AF2P26368 475 aaKnown RBP eCLIP16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 INPP5BP32019 993 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 KRT2P35908 639 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 DNM1Q05193 864 aaKnown RBP16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 NOL9Q5SY16 702 aaKnown RBP16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 HOMER1Q86YM7 354 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 ADGRF4Q8IZF3 695 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 ACER1Q8TDN7 264 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 LPAR1Q92633 364 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 PIGSQ96S52 555 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 WDR18Q9BV38 432 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 KCNJ14Q9UNX9 436 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 CSADQ9Y600 493 aa16.42■□□□□ 0.22
HMGA1P1-201ENST00000415560 MYH15Q9Y2K3 1946 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 C19orf81C9J6K1 198 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 ADM5C9JUS6 153 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 PRPF40AO75400 957 aaKnown RBP16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 GNA11P29992 359 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 TTBK2Q6IQ55 1244 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 BTNL9Q6UXG8 535 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 HEATR3Q7Z4Q2 680 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 DIS3L2Q8IYB7 885 aaKnown RBP16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 ZKSCAN4Q969J2 545 aaPredicted RBP16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 CDCA5Q96FF9 252 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 KIAA1683Q9H0B3 1180 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 RRAGCQ9HB90 399 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 C6orf50Q9HD87 102 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 GJB4Q9NTQ9 266 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 BARHL2Q9NY43 387 aa16.41■□□□□ 0.22
HMGA1P1-201ENST00000415560 UBE2Q2LH0YL09 131 aa16.4■□□□□ 0.22
HMGA1P1-201ENST00000415560 ZBTB5O15062 677 aa16.4■□□□□ 0.22
HMGA1P1-201ENST00000415560 PLA2G6O60733 806 aa16.4■□□□□ 0.22
HMGA1P1-201ENST00000415560 PTPRAP18433 802 aa16.4■□□□□ 0.22
HMGA1P1-201ENST00000415560 STAT2P52630 851 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms