RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 HIBADHP31937 336 aaKnown RBP8.75□□□□□ -1.01
SIK3-203ENST00000415541 STK38Q15208 465 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 IQCEQ6IPM2 695 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 TRIM22Q8IYM9 498 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 IL25Q9H293 177 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 HELLSQ9NRZ9 838 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 DDX20Q9UHI6 824 aaKnown RBP8.75□□□□□ -1.01
SIK3-203ENST00000415541 NFAT5O94916 1531 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 COQ9O75208 318 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 UFL1O94874 794 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 MYL5Q02045 173 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 MTA1Q13330 715 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
SIK3-203ENST00000415541 DRAXINQ8NBI3 349 aaPredicted RBP8.75□□□□□ -1.01
SIK3-203ENST00000415541 RPGRIP1Q96KN7 1286 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 NCOA5Q9HCD5 579 aaKnown RBP8.75□□□□□ -1.01
SIK3-203ENST00000415541 SLC12A7Q9Y666 1083 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 BUB1BO60566 1050 aaPredicted RBP8.74□□□□□ -1.01
SIK3-203ENST00000415541 PPFIA2O75334 1257 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 GGCXP38435 758 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 E2F5Q15329 346 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 TBC1D9BQ66K14 1250 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 PTF1AQ7RTS3 328 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 TAX1BP1Q86VP1 789 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 SPDYE1Q8NFV5 336 aaPredicted RBP8.74□□□□□ -1.01
SIK3-203ENST00000415541 NAA15Q9BXJ9 866 aaKnown RBP8.74□□□□□ -1.01
SIK3-203ENST00000415541 ZC3H12CQ9C0D7 883 aaKnown RBP8.74□□□□□ -1.01
SIK3-203ENST00000415541 RABEP2Q9H5N1 569 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 LZTFL1Q9NQ48 299 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 GGA2Q9UJY4 613 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 MAGEB6P1A0A0J9YX57 407 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 B4E1Z4 1266 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 MARCH6O60337 910 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 PFKFB2O60825 505 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 PRDM1O75626 825 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 CDKL5O76039 1030 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 CIAO1O76071 339 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 CKAP4Q07065 602 aaKnown RBP8.74□□□□□ -1.01
SIK3-203ENST00000415541 RESTQ13127 1097 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 RABL6Q3YEC7 729 aaPredicted RBP8.74□□□□□ -1.01
SIK3-203ENST00000415541 SLC30A9Q6PML9 568 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 LMBR1Q8WVP7 490 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 ARHGEF1Q92888 912 aaKnown RBP8.74□□□□□ -1.01
SIK3-203ENST00000415541 SLC4A9Q96Q91 983 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 SPAG5Q96R06 1193 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 TPCN1Q9ULQ1 816 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.74□□□□□ -1.01
SIK3-203ENST00000415541 ENO4A6NNW6 628 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 GOLGA8AA7E2F4 631 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 RPS6KA4O75676 772 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 RPS6KB1P23443 525 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 TRIM28Q13263 835 aaKnown RBP8.74□□□□□ -1.01
SIK3-203ENST00000415541 SLC5A9Q2M3M2 681 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 DPCR1Q3MIW9 517 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 ATG9AQ7Z3C6 839 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 PPFIBP1Q86W92 1011 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 TRIM58Q8NG06 486 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 PARD3BQ8TEW8 1205 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 C8orf76Q96K31 380 aa8.74□□□□□ -1.01
SIK3-203ENST00000415541 RASSF9O75901 435 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 HSPD1P10809 573 aaKnown RBP8.73□□□□□ -1.01
SIK3-203ENST00000415541 PDE6AP16499 860 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 IKQ13123 557 aaPredicted RBP8.73□□□□□ -1.01
SIK3-203ENST00000415541 CCDC38Q502W7 563 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 TRIM74Q86UV6 250 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 TRIM73Q86UV7 250 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 CCDC13Q8IYE1 715 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 LINC00116Q8NCU8 138 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 BORCS6Q96GS4 357 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 MYO1AQ9UBC5 1043 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 BIN1O00499 593 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 AHCYL1O43865 530 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 HSF2BPO75031 334 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 ZNF202O95125 648 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 SSBP05455 408 aaKnown RBP eCLIP8.73□□□□□ -1.01
SIK3-203ENST00000415541 SCARF1Q14162 830 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 CYB5D1Q6P9G0 228 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 MFN1Q8IWA4 741 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 CCHCR1Q8TD31 782 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 MAP4K1Q92918 833 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 OSBP2Q969R2 916 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 ANKRD2Q9GZV1 360 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 TTF2Q9UNY4 1162 aaKnown RBP8.73□□□□□ -1.01
SIK3-203ENST00000415541 RIPOR2Q9Y4F9 1068 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 COL15A1P39059 1388 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 TSPY2A6NKD2 308 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 FANCGO15287 622 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 ZEB2O60315 1214 aa8.73□□□□□ -1.01
SIK3-203ENST00000415541 TARSL2A2RTX5 802 aaKnown RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 EME2A4GXA9 379 aaPredicted RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 PPP1R12BO60237 982 aaPredicted RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 SKAP2O75563 359 aaPredicted RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 FGAP02671 866 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 RFX5P48382 616 aaPredicted RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 METAP2P50579 478 aaKnown RBP eCLIP8.72□□□□□ -1.01
SIK3-203ENST00000415541 KCNB1Q14721 858 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 SPECC1Q5M775 1068 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 SPECC1LQ69YQ0 1117 aa8.72□□□□□ -1.01
SIK3-203ENST00000415541 GPR101Q96P66 508 aaPredicted RBP8.72□□□□□ -1.01
SIK3-203ENST00000415541 CRNKL1Q9BZJ0 848 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms