RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 RLBP1P12271 317 aa19.31■□□□□ 0.68
SYNGR1-206ENST00000415332 FCER1AP12319 257 aa19.31■□□□□ 0.68
SYNGR1-206ENST00000415332 SLC9C2Q5TAH2 1124 aa19.31■□□□□ 0.68
SYNGR1-206ENST00000415332 CRNKL1Q9BZJ0 848 aaKnown RBP19.31■□□□□ 0.68
SYNGR1-206ENST00000415332 TMX2Q9Y320 296 aa19.31■□□□□ 0.68
SYNGR1-206ENST00000415332 ZNF532Q9HCE3 1301 aa19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 A0A1W2PQ45 241 aaPredicted RBP19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 A0A1W2PQY0 241 aa19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 ZNF865P0CJ78 1059 aaPredicted RBP19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 SLFNL1Q499Z3 407 aa19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 TMED8Q6PL24 325 aaPredicted RBP19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 MMP19Q99542 508 aa19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 VCPKMTQ9H867 229 aa19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 IL1RAPL2Q9NP60 686 aa19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 FBXO28Q9NVF7 368 aa19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 MCM3APO60318 1980 aa19.3■□□□□ 0.68
SYNGR1-206ENST00000415332 TCRBV5S4A2TA0A5A2 114 aa19.29■□□□□ 0.68
SYNGR1-206ENST00000415332 PRKAB2O43741 272 aa19.29■□□□□ 0.68
SYNGR1-206ENST00000415332 RAG1P15918 1043 aa19.29■□□□□ 0.68
SYNGR1-206ENST00000415332 ICA1Q05084 483 aa19.29■□□□□ 0.68
SYNGR1-206ENST00000415332 ZNF792Q3KQV3 632 aa19.29■□□□□ 0.68
SYNGR1-206ENST00000415332 CEP85Q6P2H3 762 aa19.29■□□□□ 0.68
SYNGR1-206ENST00000415332 ITPRIPQ8IWB1 547 aa19.29■□□□□ 0.68
SYNGR1-206ENST00000415332 TINF2Q9BSI4 451 aa19.29■□□□□ 0.68
SYNGR1-206ENST00000415332 ARHGEF10LQ9HCE6 1279 aa19.29■□□□□ 0.68
SYNGR1-206ENST00000415332 ADAMTS5Q9UNA0 930 aa19.29■□□□□ 0.68
SYNGR1-206ENST00000415332 TMEM265A0A087WTH1 108 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 CYP2D7A0A087X1C5 515 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 ADAMTS4O75173 837 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 SLC25A27O95847 323 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 FPGSQ05932 587 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 FAAP100Q0VG06 881 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 RNF180Q86T96 592 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 ARMT1Q9H993 441 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 TMEM39AQ9NV64 488 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 SWAP70Q9UH65 585 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 NRBP1Q9UHY1 535 aa19.28■□□□□ 0.68
SYNGR1-206ENST00000415332 WDR46O15213 610 aaKnown RBP19.27■□□□□ 0.68
SYNGR1-206ENST00000415332 DNAJB2P25686 324 aa19.27■□□□□ 0.68
SYNGR1-206ENST00000415332 TTF1Q15361 905 aaPredicted RBP19.27■□□□□ 0.68
SYNGR1-206ENST00000415332 RIOX2Q8IUF8 465 aa19.27■□□□□ 0.68
SYNGR1-206ENST00000415332 SYMPKQ92797 1274 aaKnown RBP19.27■□□□□ 0.68
SYNGR1-206ENST00000415332 MYH7P12883 1935 aa19.27■□□□□ 0.67
SYNGR1-206ENST00000415332 MUC3AQ02505 3323 aa19.27■□□□□ 0.67
SYNGR1-206ENST00000415332 GBF1Q92538 1859 aa19.26■□□□□ 0.67
SYNGR1-206ENST00000415332 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.26■□□□□ 0.67
SYNGR1-206ENST00000415332 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.26■□□□□ 0.67
SYNGR1-206ENST00000415332 GOLIM4O00461 696 aa19.26■□□□□ 0.67
SYNGR1-206ENST00000415332 EEF2P13639 858 aaKnown RBP19.26■□□□□ 0.67
SYNGR1-206ENST00000415332 IRX5P78411 483 aaPredicted RBP19.26■□□□□ 0.67
SYNGR1-206ENST00000415332 DNAJC2Q99543 621 aaKnown RBP19.26■□□□□ 0.67
SYNGR1-206ENST00000415332 ROBO3Q96MS0 1386 aa19.26■□□□□ 0.67
SYNGR1-206ENST00000415332 CHGBP05060 677 aa19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 AKR1A1P14550 325 aa19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 STAT3P40763 770 aa19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 CDK8P49336 464 aa19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 ACLYP53396 1101 aa19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 KCTD2Q14681 263 aa19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 ANKRD33Q7Z3H0 272 aa19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 FTSJ3Q8IY81 847 aaKnown RBP19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 REPS2Q8NFH8 660 aa19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 ZNF576Q9H609 170 aa19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 ZNF214Q9UL59 606 aaPredicted RBP19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 DIS3Q9Y2L1 958 aaKnown RBP19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 SYNRGQ9UMZ2 1314 aa19.25■□□□□ 0.67
SYNGR1-206ENST00000415332 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 GRXCR1A8MXD5 290 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 VWA5AO00534 786 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 TJAP1Q5JTD0 557 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 C16orf59Q7L2K0 433 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 ERC1Q8IUD2 1116 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 KLHDC9Q8NEP7 349 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 RHPN1Q8TCX5 695 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 TOX2Q96NM4 488 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 SH2D4AQ9H788 454 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 STARD7Q9NQZ5 370 aa19.24■□□□□ 0.67
SYNGR1-206ENST00000415332 GREB1LQ9C091 1923 aaPredicted RBP19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 MBD4O95243 580 aa19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 SNAI1O95863 264 aaPredicted RBP19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 TIMP1P01033 207 aa19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 PBX2P40425 430 aa19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 FAM83BQ5T0W9 1011 aa19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 C12orf60Q5U649 245 aa19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 CCSAPQ6IQ19 270 aaPredicted RBP19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 TIFAQ96CG3 184 aa19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 TSEN34Q9BSV6 310 aaKnown RBP19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 PPP1R9AQ9ULJ8 1098 aa19.23■□□□□ 0.67
SYNGR1-206ENST00000415332 APBB1O00213 710 aa19.22■□□□□ 0.67
SYNGR1-206ENST00000415332 RAD21O60216 631 aa19.22■□□□□ 0.67
SYNGR1-206ENST00000415332 KCNA10Q16322 511 aa19.22■□□□□ 0.67
SYNGR1-206ENST00000415332 PPM1EQ8WY54 764 aa19.22■□□□□ 0.67
SYNGR1-206ENST00000415332 CCDC17Q96LX7 622 aa19.22■□□□□ 0.67
SYNGR1-206ENST00000415332 BCL11AQ9H165 835 aa19.22■□□□□ 0.67
SYNGR1-206ENST00000415332 RAPGEFL1Q9UHV5 662 aa19.22■□□□□ 0.67
SYNGR1-206ENST00000415332 TBX21Q9UL17 535 aa19.22■□□□□ 0.67
SYNGR1-206ENST00000415332 RIPK3Q9Y572 518 aa19.22■□□□□ 0.67
SYNGR1-206ENST00000415332 DCDC2CA8MYV0 355 aa19.21■□□□□ 0.67
SYNGR1-206ENST00000415332 USP17L12C9JPN9 530 aa19.21■□□□□ 0.67
SYNGR1-206ENST00000415332 USP17L21D6R901 530 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms