RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 EAF2Q96CJ1 260 aaPredicted RBP8.4□□□□□ -1.06
LINC00343-201ENST00000414368 MXD3Q9BW11 206 aa8.4□□□□□ -1.06
LINC00343-201ENST00000414368 CCDC8Q9H0W5 538 aaPredicted RBP8.4□□□□□ -1.06
LINC00343-201ENST00000414368 ZNF232Q9UNY5 417 aa8.4□□□□□ -1.06
LINC00343-201ENST00000414368 AKAP2Q9Y2D5 859 aa8.4□□□□□ -1.06
LINC00343-201ENST00000414368 HRH3Q9Y5N1 445 aa8.4□□□□□ -1.06
LINC00343-201ENST00000414368 PSME4Q14997 1843 aa8.4□□□□□ -1.07
LINC00343-201ENST00000414368 MYH13Q9UKX3 1938 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 ZNF646O15015 1829 aaPredicted RBP8.39□□□□□ -1.07
LINC00343-201ENST00000414368 GLTPD2A6NH11 291 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 IFIT1P09914 478 aaKnown RBP8.39□□□□□ -1.07
LINC00343-201ENST00000414368 IL1R1P14778 569 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 PHKA1P46020 1223 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 HDAC1Q13547 482 aaPredicted RBP8.39□□□□□ -1.07
LINC00343-201ENST00000414368 HSP90AB4PQ58FF6 505 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 TNNI3KQ59H18 835 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 CAVIN4Q5BKX8 364 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 ZMYM1Q5SVZ6 1142 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 CIAPIN1Q6FI81 312 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 ZNF804AQ7Z570 1209 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 VPS37DQ86XT2 251 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 ERC1Q8IUD2 1116 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 DBNDD2Q9BQY9 259 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 COA1Q9GZY4 146 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.39□□□□□ -1.07
LINC00343-201ENST00000414368 TLR7Q9NYK1 1049 aaKnown RBP8.39□□□□□ -1.07
LINC00343-201ENST00000414368 FPGT-TNNI3KV9GXZ4 949 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 ARAP2Q8WZ64 1704 aa8.39□□□□□ -1.07
LINC00343-201ENST00000414368 ZNF609O15014 1411 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 SHTN1A0MZ66 631 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 RAB11FIP3O75154 756 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 CTSOP43234 321 aaPredicted RBP8.38□□□□□ -1.07
LINC00343-201ENST00000414368 RNF144AP50876 292 aaPredicted RBP8.38□□□□□ -1.07
LINC00343-201ENST00000414368 GORABQ5T7V8 394 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 TTLL5Q6EMB2 1281 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 TAS1R3Q7RTX0 852 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 AACSQ86V21 672 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 C16orf71Q8IYS4 520 aaPredicted RBP8.38□□□□□ -1.07
LINC00343-201ENST00000414368 GPC2Q8N158 579 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 TDRD7Q8NHU6 1098 aaKnown RBP8.38□□□□□ -1.07
LINC00343-201ENST00000414368 KIF1BPQ96EK5 621 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 NIFKQ9BYG3 293 aaKnown RBP8.38□□□□□ -1.07
LINC00343-201ENST00000414368 LRRCC1Q9C099 1032 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 GZF1Q9H116 711 aaPredicted RBP8.38□□□□□ -1.07
LINC00343-201ENST00000414368 RWDD1Q9H446 243 aaPredicted RBP8.38□□□□□ -1.07
LINC00343-201ENST00000414368 RRAGCQ9HB90 399 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 NMRK2Q9NPI5 230 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 GPR108Q9NPR9 543 aa8.38□□□□□ -1.07
LINC00343-201ENST00000414368 DBNLQ9UJU6 430 aaKnown RBP8.38□□□□□ -1.07
LINC00343-201ENST00000414368 GNEQ9Y223 722 aaKnown RBP8.38□□□□□ -1.07
LINC00343-201ENST00000414368 AKAP11Q9UKA4 1901 aa8.37□□□□□ -1.07
LINC00343-201ENST00000414368 SERTM1A2A2V5 107 aa8.37□□□□□ -1.07
LINC00343-201ENST00000414368 FRAT2O75474 233 aaPredicted RBP8.37□□□□□ -1.07
LINC00343-201ENST00000414368 NEFLP07196 543 aa8.37□□□□□ -1.07
LINC00343-201ENST00000414368 VIL1P09327 827 aaKnown RBP8.37□□□□□ -1.07
LINC00343-201ENST00000414368 GMPSP49915 693 aaPredicted RBP8.37□□□□□ -1.07
LINC00343-201ENST00000414368 CHAF1AQ13111 956 aaPredicted RBP8.37□□□□□ -1.07
LINC00343-201ENST00000414368 TNIP1Q15025 636 aa8.37□□□□□ -1.07
LINC00343-201ENST00000414368 DACT2Q5SW24 774 aa8.37□□□□□ -1.07
LINC00343-201ENST00000414368 ANKRD45Q5TZF3 282 aa8.37□□□□□ -1.07
LINC00343-201ENST00000414368 CERS5Q8N5B7 392 aa8.37□□□□□ -1.07
LINC00343-201ENST00000414368 RHBDD1Q8TEB9 315 aa8.37□□□□□ -1.07
LINC00343-201ENST00000414368 GOLGA2P5Q9HBQ8 144 aa8.37□□□□□ -1.07
LINC00343-201ENST00000414368 USP3Q9Y6I4 520 aa8.37□□□□□ -1.07
LINC00343-201ENST00000414368 MYO5AQ9Y4I1 1855 aaKnown RBP8.36□□□□□ -1.07
LINC00343-201ENST00000414368 KDM2BQ8NHM5 1336 aa8.36□□□□□ -1.07
LINC00343-201ENST00000414368 POLR2AP24928 1970 aaKnown RBP8.36□□□□□ -1.07
LINC00343-201ENST00000414368 ABL1P00519 1130 aa8.36□□□□□ -1.07
LINC00343-201ENST00000414368 SCNN1AP37088 669 aa8.36□□□□□ -1.07
LINC00343-201ENST00000414368 EPS15P42566 896 aa8.36□□□□□ -1.07
LINC00343-201ENST00000414368 GRIK5Q16478 980 aa8.36□□□□□ -1.07
LINC00343-201ENST00000414368 STRIP1Q5VSL9 837 aa8.36□□□□□ -1.07
LINC00343-201ENST00000414368 FOXD4L5Q5VV16 416 aaPredicted RBP8.36□□□□□ -1.07
LINC00343-201ENST00000414368 PI16Q6UXB8 463 aa8.36□□□□□ -1.07
LINC00343-201ENST00000414368 CLASRPQ8N2M8 674 aaKnown RBP8.36□□□□□ -1.07
LINC00343-201ENST00000414368 STAG2Q8N3U4 1231 aa8.36□□□□□ -1.07
LINC00343-201ENST00000414368 OTUD7AQ8TE49 926 aaPredicted RBP8.36□□□□□ -1.07
LINC00343-201ENST00000414368 GRIP2Q9C0E4 1043 aa8.36□□□□□ -1.07
LINC00343-201ENST00000414368 GNL3LQ9NVN8 582 aaKnown RBP8.36□□□□□ -1.07
LINC00343-201ENST00000414368 WDR90Q96KV7 1748 aa8.36□□□□□ -1.07
LINC00343-201ENST00000414368 COL1A1P02452 1464 aaPredicted RBP8.36□□□□□ -1.07
LINC00343-201ENST00000414368 FAM205AQ6ZU69 1335 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 F8W031 263 aaPredicted RBP8.35□□□□□ -1.07
LINC00343-201ENST00000414368 IFIT2P09913 472 aaKnown RBP8.35□□□□□ -1.07
LINC00343-201ENST00000414368 BCRP11274 1271 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 MCAMP43121 646 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 RASGRF1Q13972 1273 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 GAS6Q14393 721 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 TEAD4Q15561 434 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 CCDC158Q5M9N0 1113 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 MFSD14BQ5SR56 506 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 TTC39AQ5SRH9 613 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 KIAA0825Q8IV33 1275 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 SMC5Q8IY18 1101 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 COL26A1Q96A83 441 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 GCC1Q96CN9 775 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 GMLQ99445 158 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 C2orf49Q9BVC5 232 aaPredicted RBP8.35□□□□□ -1.07
LINC00343-201ENST00000414368 KRTAP4-7Q9BYR0 210 aa8.35□□□□□ -1.07
LINC00343-201ENST00000414368 HMG20BQ9P0W2 317 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms