RNA–Protein interactions for RNA: ENST00000414306.5

SBDS-202, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 5

Gene SBDS, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-202ENST00000414306 USP17L15C9J2P7 530 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 USP17L13C9JLJ4 530 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 USP17L11C9JVI0 530 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 USP17L18D6R9N7 530 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 USP17L22D6RA61 530 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 USP17L17D6RBQ6 530 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 USP17L19D6RCP7 530 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 USP17L20D6RJB6 530 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 FLOT1O75955 427 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 OSBPP22059 807 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 USP17L24Q0WX57 530 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 CATSPERGQ6ZRH7 1159 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 SMCR8Q8TEV9 937 aaPredicted RBP20.75■□□□□ 0.91
SBDS-202ENST00000414306 WBP1LQ9NX94 342 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 SYNPO2Q9UMS6 1093 aa20.75■□□□□ 0.91
SBDS-202ENST00000414306 CCDC69A6NI79 296 aa20.74■□□□□ 0.91
SBDS-202ENST00000414306 PEX10O60683 326 aa20.74■□□□□ 0.91
SBDS-202ENST00000414306 ALDH1A1P00352 501 aa20.74■□□□□ 0.91
SBDS-202ENST00000414306 GOLGA8HP0CJ92 632 aa20.74■□□□□ 0.91
SBDS-202ENST00000414306 PDHBP11177 359 aa20.74■□□□□ 0.91
SBDS-202ENST00000414306 BMP3P12645 472 aa20.74■□□□□ 0.91
SBDS-202ENST00000414306 IKQ13123 557 aaPredicted RBP20.74■□□□□ 0.91
SBDS-202ENST00000414306 PARK7Q99497 189 aaKnown RBP20.74■□□□□ 0.91
SBDS-202ENST00000414306 P2RX7Q99572 595 aaKnown RBP20.74■□□□□ 0.91
SBDS-202ENST00000414306 GPCPD1Q9NPB8 672 aa20.74■□□□□ 0.91
SBDS-202ENST00000414306 PNMA3Q9UL41 463 aa20.74■□□□□ 0.91
SBDS-202ENST00000414306 NAP1L2Q9ULW6 460 aaPredicted RBP20.74■□□□□ 0.91
SBDS-202ENST00000414306 WDR19Q8NEZ3 1342 aa20.74■□□□□ 0.91
SBDS-202ENST00000414306 ECM2O94769 699 aaPredicted RBP20.73■□□□□ 0.91
SBDS-202ENST00000414306 RXRAP19793 462 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 HOXA7P31268 230 aaPredicted RBP20.73■□□□□ 0.91
SBDS-202ENST00000414306 NUP133Q8WUM0 1156 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 GMCL1Q96IK5 515 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 LARP6Q9BRS8 491 aaKnown RBP20.73■□□□□ 0.91
SBDS-202ENST00000414306 TM6SF1Q9BZW5 370 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 ZFYVE28Q9HCC9 887 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 CPA4Q9UI42 421 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 SLC45A1Q9Y2W3 748 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 TMEM232C9JQI7 657 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 CA12O43570 354 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 HSPA1AP0DMV8 641 aaKnown RBP20.73■□□□□ 0.91
SBDS-202ENST00000414306 HSPA1BP0DMV9 641 aaKnown RBP20.73■□□□□ 0.91
SBDS-202ENST00000414306 TTBK2Q6IQ55 1244 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 CATIPQ7Z7H3 387 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 CCDC144CPQ8IYA2 1237 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 DCAF4Q8WV16 495 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 BRF1Q92994 677 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 ZCCHC17Q9NP64 241 aaKnown RBP20.73■□□□□ 0.91
SBDS-202ENST00000414306 PDRG1Q9NUG6 133 aa20.73■□□□□ 0.91
SBDS-202ENST00000414306 SLC16A2P36021 539 aa20.72■□□□□ 0.91
SBDS-202ENST00000414306 RBM25P49756 843 aaKnown RBP20.72■□□□□ 0.91
SBDS-202ENST00000414306 HERVK_113P62684 666 aa20.72■□□□□ 0.91
SBDS-202ENST00000414306 APOBRQ0VD83 1088 aa20.72■□□□□ 0.91
SBDS-202ENST00000414306 KIFC2Q96AC6 838 aa20.72■□□□□ 0.91
SBDS-202ENST00000414306 MTA3Q9BTC8 594 aa20.72■□□□□ 0.91
SBDS-202ENST00000414306 CPVLQ9H3G5 476 aa20.72■□□□□ 0.91
SBDS-202ENST00000414306 LIFRP42702 1097 aa20.71■□□□□ 0.91
SBDS-202ENST00000414306 NOL8Q76FK4 1167 aaKnown RBP20.71■□□□□ 0.91
SBDS-202ENST00000414306 MICU3Q86XE3 530 aa20.71■□□□□ 0.91
SBDS-202ENST00000414306 ATG4CQ96DT6 458 aa20.71■□□□□ 0.91
SBDS-202ENST00000414306 TBC1D32Q96NH3 1257 aa20.71■□□□□ 0.91
SBDS-202ENST00000414306 KIF2CQ99661 725 aa20.71■□□□□ 0.91
SBDS-202ENST00000414306 PAGR1Q9BTK6 254 aa20.71■□□□□ 0.91
SBDS-202ENST00000414306 BRPF3Q9ULD4 1205 aa20.71■□□□□ 0.91
SBDS-202ENST00000414306 SLC12A7Q9Y666 1083 aa20.71■□□□□ 0.91
SBDS-202ENST00000414306 A0A0G2JMZ2 1700 aa20.7■□□□□ 0.9
SBDS-202ENST00000414306 KLF18A0A0U1RQI7 1052 aa20.7■□□□□ 0.9
SBDS-202ENST00000414306 SPDYE16A6NNV3 312 aaPredicted RBP20.7■□□□□ 0.9
SBDS-202ENST00000414306 ZNF543Q08ER8 600 aa20.7■□□□□ 0.9
SBDS-202ENST00000414306 COG2Q14746 738 aa20.7■□□□□ 0.9
SBDS-202ENST00000414306 ANKRD13CQ8N6S4 541 aa20.7■□□□□ 0.9
SBDS-202ENST00000414306 SLF1Q9BQI6 1058 aa20.7■□□□□ 0.9
SBDS-202ENST00000414306 SAGE1Q9NXZ1 904 aa20.7■□□□□ 0.9
SBDS-202ENST00000414306 ZSWIM8A7E2V4 1837 aa20.7■□□□□ 0.9
SBDS-202ENST00000414306 FOXN1O15353 648 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 TLR2O60603 784 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 PARP1P09874 1014 aaKnown RBP20.69■□□□□ 0.9
SBDS-202ENST00000414306 SNHG28P0DPA3 235 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 NEK4P51957 841 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 STAT2P52630 851 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 SNAP25P60880 206 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 TROAPQ12815 778 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 TOB2Q14106 344 aaPredicted RBP20.69■□□□□ 0.9
SBDS-202ENST00000414306 POTEEQ6S8J3 1075 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 TMTC2Q8N394 836 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 STAG2Q8N3U4 1231 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 FEM1BQ9UK73 627 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 PPP1R9AQ9ULJ8 1098 aa20.69■□□□□ 0.9
SBDS-202ENST00000414306 DSG3P32926 999 aa20.68■□□□□ 0.9
SBDS-202ENST00000414306 SGMS1Q86VZ5 419 aa20.68■□□□□ 0.9
SBDS-202ENST00000414306 IL17RAQ96F46 866 aa20.68■□□□□ 0.9
SBDS-202ENST00000414306 UBA5Q9GZZ9 404 aa20.68■□□□□ 0.9
SBDS-202ENST00000414306 TXNRD2Q9NNW7 524 aa20.68■□□□□ 0.9
SBDS-202ENST00000414306 ADGRA2Q96PE1 1338 aa20.68■□□□□ 0.9
SBDS-202ENST00000414306 MYH6P13533 1939 aa20.68■□□□□ 0.9
SBDS-202ENST00000414306 DDAH1O94760 285 aa20.68■□□□□ 0.9
SBDS-202ENST00000414306 GRM4Q14833 912 aa20.68■□□□□ 0.9
SBDS-202ENST00000414306 APOA5Q6Q788 366 aa20.68■□□□□ 0.9
SBDS-202ENST00000414306 SYNE3Q6ZMZ3 975 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms