RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 CTCFP49711 727 aaPredicted RBP15.48■□□□□ 0.07
LINC00887-202ENST00000414120 SPO11Q9Y5K1 396 aa15.48■□□□□ 0.07
LINC00887-202ENST00000414120 NFAT5O94916 1531 aa15.48■□□□□ 0.07
LINC00887-202ENST00000414120 GRIN2DO15399 1336 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 SYF2O95926 243 aaKnown RBP15.47■□□□□ 0.07
LINC00887-202ENST00000414120 CCDC152Q4G0S7 254 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 SLC15A3Q8IY34 581 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.47■□□□□ 0.07
LINC00887-202ENST00000414120 TRAPPC9Q96Q05 1148 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 OSBPL10Q9BXB5 764 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 KAT14Q9H8E8 782 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 DMAP1Q9NPF5 467 aaPredicted RBP15.47■□□□□ 0.07
LINC00887-202ENST00000414120 SLIT3O75094 1523 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 P4HA2O15460 535 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 SKOR1P84550 965 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 COL19A1Q14993 1142 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 GNPTABQ3T906 1256 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 NAA16Q6N069 864 aaPredicted RBP15.47■□□□□ 0.07
LINC00887-202ENST00000414120 HOMER1Q86YM7 354 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 TEKT4Q8WW24 435 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 BPIFA3Q9BQP9 254 aa15.47■□□□□ 0.07
LINC00887-202ENST00000414120 BUB1BO60566 1050 aaPredicted RBP15.46■□□□□ 0.07
LINC00887-202ENST00000414120 CMPK2Q5EBM0 449 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 SMARCC2Q8TAQ2 1214 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 WDR66Q8TBY9 1149 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 MORC4Q8TE76 937 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 CHAMP1Q96JM3 812 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 JAKMIP1Q96N16 626 aaKnown RBP15.46■□□□□ 0.07
LINC00887-202ENST00000414120 UBE2OQ9C0C9 1292 aaKnown RBP15.46■□□□□ 0.07
LINC00887-202ENST00000414120 CENPHQ9H3R5 247 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 CPDO75976 1380 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 MAP2P11137 1827 aaKnown RBP15.46■□□□□ 0.07
LINC00887-202ENST00000414120 LRRIQ3A6PVS8 624 aaPredicted RBP15.46■□□□□ 0.07
LINC00887-202ENST00000414120 ZBED4O75132 1171 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 LMNB2Q03252 620 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 SMUG1Q53HV7 270 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 KRI1Q8N9T8 703 aaKnown RBP15.46■□□□□ 0.07
LINC00887-202ENST00000414120 GOLPH3LQ9H4A5 285 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 HELLSQ9NRZ9 838 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 DDX19BQ9UMR2 479 aa15.46■□□□□ 0.07
LINC00887-202ENST00000414120 PHRF1Q9P1Y6 1649 aaKnown RBP15.46■□□□□ 0.06
LINC00887-202ENST00000414120 FOSL1P15407 271 aa15.46■□□□□ 0.06
LINC00887-202ENST00000414120 CCT6AP40227 531 aaKnown RBP15.46■□□□□ 0.06
LINC00887-202ENST00000414120 CCNG1P51959 295 aa15.46■□□□□ 0.06
LINC00887-202ENST00000414120 INAQ16352 499 aa15.46■□□□□ 0.06
LINC00887-202ENST00000414120 SREK1Q8WXA9 508 aaKnown RBP15.46■□□□□ 0.06
LINC00887-202ENST00000414120 CTNNBL1Q8WYA6 563 aaPredicted RBP15.46■□□□□ 0.06
LINC00887-202ENST00000414120 ZNF653Q96CK0 615 aa15.46■□□□□ 0.06
LINC00887-202ENST00000414120 NUP58Q9BVL2 599 aa15.46■□□□□ 0.06
LINC00887-202ENST00000414120 SH3BP5O60239 455 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 SULT6B1Q6IMI4 303 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 HOOK3Q86VS8 718 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 ZNF280CQ8ND82 737 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 UIMC1Q96RL1 719 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 SH3GL2Q99962 352 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 UPF3BQ9BZI7 483 aaKnown RBP15.45■□□□□ 0.06
LINC00887-202ENST00000414120 MRPL46Q9H2W6 279 aaKnown RBP15.45■□□□□ 0.06
LINC00887-202ENST00000414120 METTL14Q9HCE5 456 aaKnown RBP15.45■□□□□ 0.06
LINC00887-202ENST00000414120 PCMTD2Q9NV79 361 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 ANO10Q9NW15 660 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 TTI1O43156 1089 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 MRPS35P82673 323 aaKnown RBP15.45■□□□□ 0.06
LINC00887-202ENST00000414120 EYA1Q99502 592 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 NUP62CLQ9H1M0 184 aa15.45■□□□□ 0.06
LINC00887-202ENST00000414120 DDX21Q9NR30 783 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00887-202ENST00000414120 NOP53Q9NZM5 478 aaKnown RBP15.45■□□□□ 0.06
LINC00887-202ENST00000414120 MARF1Q9Y4F3 1742 aaKnown RBP15.45■□□□□ 0.06
LINC00887-202ENST00000414120 WDR46O15213 610 aaKnown RBP15.44■□□□□ 0.06
LINC00887-202ENST00000414120 BIRC5O15392 142 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 ZNF132P52740 706 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 CSE1LP55060 971 aaKnown RBP15.44■□□□□ 0.06
LINC00887-202ENST00000414120 CCDC146Q8IYE0 955 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 IGSF22Q8N9C0 903 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 SMC6Q96SB8 1091 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 SLC39A3Q9BRY0 314 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 SLC5A4Q9NY91 659 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 SH3GLB1Q9Y371 365 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 BECN2A8MW95 431 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 GNAI3P08754 354 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 HOXD12P35452 270 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 ANO6Q4KMQ2 910 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 NANOGNBQ7Z5D8 188 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 SRGAP1Q7Z6B7 1085 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 UNC5CLQ8IV45 518 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 VPS37AQ8NEZ2 397 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 HVCN1Q96D96 273 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 ANKZF1Q9H8Y5 726 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 SHPRHQ149N8 1683 aa15.44■□□□□ 0.06
LINC00887-202ENST00000414120 CAMTA1Q9Y6Y1 1673 aa15.43■□□□□ 0.06
LINC00887-202ENST00000414120 ABL1P00519 1130 aa15.43■□□□□ 0.06
LINC00887-202ENST00000414120 SULT2A1Q06520 285 aa15.43■□□□□ 0.06
LINC00887-202ENST00000414120 WDR93Q6P2C0 686 aa15.43■□□□□ 0.06
LINC00887-202ENST00000414120 ABCB6Q9NP58 842 aa15.43■□□□□ 0.06
LINC00887-202ENST00000414120 DNAJC8O75937 253 aaPredicted RBP15.43■□□□□ 0.06
LINC00887-202ENST00000414120 MECOMQ03112 1051 aa15.43■□□□□ 0.06
LINC00887-202ENST00000414120 UHMK1Q8TAS1 419 aaKnown RBP15.43■□□□□ 0.06
LINC00887-202ENST00000414120 ZMAT2Q96NC0 199 aaKnown RBP15.43■□□□□ 0.06
LINC00887-202ENST00000414120 TANGO6Q9C0B7 1094 aa15.43■□□□□ 0.06
LINC00887-202ENST00000414120 VCX3BQ9H321 246 aa15.43■□□□□ 0.06
LINC00887-202ENST00000414120 SLC30A1Q9Y6M5 507 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms