RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 CRHR2Q13324 411 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 Q6ZUG5 572 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 NUP133Q8WUM0 1156 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 LPAR1Q92633 364 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 TMEM87BQ96K49 555 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 C12orf42Q96LP6 360 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 PARK7Q99497 189 aaKnown RBP12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 BACH2Q9BYV9 841 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 ASCC2Q9H1I8 757 aaPredicted RBP12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 GPCPD1Q9NPB8 672 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 PNMA3Q9UL41 463 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 CYP46A1Q9Y6A2 500 aa12.23□□□□□ -0.45
HLA-DMB-257ENST00000414017 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 TMEM232C9JQI7 657 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 GOLGA8HP0CJ92 632 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 HSPA1AP0DMV8 641 aaKnown RBP12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 HSPA1BP0DMV9 641 aaKnown RBP12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 BMP3P12645 472 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 RPS6KB1P23443 525 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 SEC23AQ15436 765 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 CATSPERGQ6ZRH7 1159 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 NOL8Q76FK4 1167 aaKnown RBP12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 CATIPQ7Z7H3 387 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 CCDC144CPQ8IYA2 1237 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 GMCL1P1Q8NEA9 526 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 IGDCC4Q8TDY8 1250 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 KIFC2Q96AC6 838 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 P2RX7Q99572 595 aaKnown RBP12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 PAGR1Q9BTK6 254 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 MYL10Q9BUA6 226 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 R3HDMLQ9H3Y0 253 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 LY9Q9HBG7 655 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 FBXO28Q9NVF7 368 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 CPA4Q9UI42 421 aa12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 CTDP1Q9Y5B0 961 aaPredicted RBP12.22□□□□□ -0.45
HLA-DMB-257ENST00000414017 LOC285556D6RIA3 1793 aa12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 CA12O43570 354 aa12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 DHX16O60231 1041 aaKnown RBP12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 RXRAP19793 462 aa12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 SLC4A3P48751 1232 aa12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 ANAPC15P60006 121 aa12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 EXOSC10Q01780 885 aaKnown RBP12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 SYNE3Q6ZMZ3 975 aa12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 RUFY3Q7L099 469 aa12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 JMYQ8N9B5 988 aa12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 DCAF4Q8WV16 495 aa12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 LARP6Q9BRS8 491 aaKnown RBP12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 PDRG1Q9NUG6 133 aa12.21□□□□□ -0.45
HLA-DMB-257ENST00000414017 KLF18A0A0U1RQI7 1052 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 PEX10O60683 326 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 PARP1P09874 1014 aaKnown RBP12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 PDHBP11177 359 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 HOXA7P31268 230 aaPredicted RBP12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 SLC16A2P36021 539 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 NOVP48745 357 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 HERVK_113P62684 666 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 APOBRQ0VD83 1088 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 PLS1Q14651 629 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 TTBK2Q6IQ55 1244 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 MICU3Q86XE3 530 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 ZNF654Q8IZM8 581 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 ANKRD13CQ8N6S4 541 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 ANKS1AQ92625 1134 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 BRF1Q92994 677 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 ATG4CQ96DT6 458 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 GMCL1Q96IK5 515 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 SLF1Q9BQI6 1058 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 ZSWIM6Q9HCJ5 1215 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 SLC45A1Q9Y2W3 748 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 SLC12A7Q9Y666 1083 aa12.2□□□□□ -0.46
HLA-DMB-257ENST00000414017 WDR19Q8NEZ3 1342 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 FOXN1O15353 648 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 NEK4P51957 841 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 STAT2P52630 851 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 SNAP25P60880 206 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 COG2Q14746 738 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 TMTC2Q8N394 836 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 TM6SF1Q9BZW5 370 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 UBA5Q9GZZ9 404 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 CPVLQ9H3G5 476 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 VAT1LQ9HCJ6 419 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 ZCCHC17Q9NP64 241 aaKnown RBP12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 SAGE1Q9NXZ1 904 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 HOXC10Q9NYD6 342 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 FEM1BQ9UK73 627 aa12.19□□□□□ -0.46
HLA-DMB-257ENST00000414017 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 GOLGA8BA8MQT2 603 aa12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 TLR2O60603 784 aa12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 LIFRP42702 1097 aa12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 ZNF543Q08ER8 600 aa12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 WDR78Q5VTH9 848 aa12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 CCDC174Q6PII3 467 aa12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 CCAR1Q8IX12 1150 aaKnown RBP12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 CTCFLQ8NI51 663 aaPredicted RBP12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 CHURC1Q8WUH1 139 aa12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 PIBF1Q8WXW3 757 aa12.18□□□□□ -0.46
HLA-DMB-257ENST00000414017 MTA3Q9BTC8 594 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms