RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 SMC5Q8IY18 1101 aa11.67□□□□□ -0.54
HCG27-202ENST00000414008 DEPDC4Q8N2C3 294 aa11.67□□□□□ -0.54
HCG27-202ENST00000414008 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
HCG27-202ENST00000414008 DNAJC2Q99543 621 aaKnown RBP11.67□□□□□ -0.54
HCG27-202ENST00000414008 BOLA2Q9H3K6 86 aa11.67□□□□□ -0.54
HCG27-202ENST00000414008 ECHDC1Q9NTX5 307 aa11.67□□□□□ -0.54
HCG27-202ENST00000414008 TMOD2Q9NZR1 351 aa11.67□□□□□ -0.54
HCG27-202ENST00000414008 PPP2R3BQ9Y5P8 575 aa11.67□□□□□ -0.54
HCG27-202ENST00000414008 MYH13Q9UKX3 1938 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 TCP10L2B9ZVM9 353 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 IDH1O75874 414 aaKnown RBP11.66□□□□□ -0.54
HCG27-202ENST00000414008 IL2RAP01589 272 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 TNNI2P48788 182 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 MAP3K12Q12852 859 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 RASA3Q14644 834 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 NAA16Q6N069 864 aaPredicted RBP11.66□□□□□ -0.54
HCG27-202ENST00000414008 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 ZNF384Q8TF68 577 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 HAUS7Q99871 368 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 ANTXR1Q9H6X2 564 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 USP40Q9NVE5 1235 aa11.66□□□□□ -0.54
HCG27-202ENST00000414008 ABT1Q9ULW3 272 aaKnown RBP11.66□□□□□ -0.54
HCG27-202ENST00000414008 MROH7-TTC4A0A0A0MT08 1334 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 POLR2AP24928 1970 aaKnown RBP11.65□□□□□ -0.54
HCG27-202ENST00000414008 GPR75-ASB3A0A0A6YYF3 556 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 GOLIM4O00461 696 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 NF2P35240 595 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 BTDP43251 543 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 VEGFBP49765 207 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 CACNB3P54284 484 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 FKBP1CQ5VVH2 108 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 B4GALNT3Q6L9W6 998 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 C2orf69Q8N8R5 385 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 GBA2Q9HCG7 927 aaPredicted RBP11.65□□□□□ -0.54
HCG27-202ENST00000414008 PAG1Q9NWQ8 432 aa11.65□□□□□ -0.54
HCG27-202ENST00000414008 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 H3BM21 787 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 PPFIA3O75145 1194 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 CYP7A1P22680 504 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 CENPCQ03188 943 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 SUPT20HL1Q3ZLR7 823 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 TMED8Q6PL24 325 aaPredicted RBP11.64□□□□□ -0.55
HCG27-202ENST00000414008 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 FAM83AQ86UY5 434 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 TRIM50Q86XT4 487 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 OTUD7AQ8TE49 926 aaPredicted RBP11.64□□□□□ -0.55
HCG27-202ENST00000414008 IRF7Q92985 503 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 EDC3Q96F86 508 aaKnown RBP11.64□□□□□ -0.55
HCG27-202ENST00000414008 NOL10Q9BSC4 688 aaKnown RBP11.64□□□□□ -0.55
HCG27-202ENST00000414008 GRIP2Q9C0E4 1043 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 LNPKQ9C0E8 428 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 ETNK1Q9HBU6 452 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 AKAP11Q9UKA4 1901 aa11.64□□□□□ -0.55
HCG27-202ENST00000414008 ERC2O15083 957 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 BAG3O95817 575 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 MAP4K4O95819 1239 aaPredicted RBP11.63□□□□□ -0.55
HCG27-202ENST00000414008 MX1P20591 662 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 GDF10P55107 478 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 FKBP1BP68106 108 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 NUCB1Q02818 461 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 DEFB115Q30KQ5 88 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 NBPF12Q5TAG4 269 aaPredicted RBP11.63□□□□□ -0.55
HCG27-202ENST00000414008 TSHZ3Q63HK5 1081 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 SAPCD2Q86UD0 394 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 CHD1LQ86WJ1 897 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 DNAJC5GQ8N7S2 189 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 MAGEB6Q8N7X4 407 aa11.63□□□□□ -0.55
HCG27-202ENST00000414008 ZSCAN10Q96SZ4 725 aaPredicted RBP11.63□□□□□ -0.55
HCG27-202ENST00000414008 TFIP11Q9UBB9 837 aaKnown RBP11.63□□□□□ -0.55
HCG27-202ENST00000414008 MKRN1Q9UHC7 482 aaKnown RBP11.63□□□□□ -0.55
HCG27-202ENST00000414008 SLC35F4A4IF30 521 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 RASSF10A6NK89 507 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 GLRX3O76003 335 aaKnown RBP11.62□□□□□ -0.55
HCG27-202ENST00000414008 INHAP05111 366 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 HUNKP57058 714 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 RHBDL3P58872 404 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 TCP10Q12799 353 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 NFIAQ12857 509 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 SLC9C2Q5TAH2 1124 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 CCDC155Q8N6L0 562 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 PI4K2BQ8TCG2 481 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 FAM151AQ8WW52 585 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 TEPSINQ96N21 525 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 IDI2Q9BXS1 227 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 TMEM39BQ9GZU3 492 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 AATFQ9NY61 560 aaKnown RBP eCLIP11.62□□□□□ -0.55
HCG27-202ENST00000414008 PCDHGA11Q9Y5H2 935 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 CNTNAP1P78357 1384 aa11.62□□□□□ -0.55
HCG27-202ENST00000414008 SALL3Q9BXA9 1300 aa11.61□□□□□ -0.55
HCG27-202ENST00000414008 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
HCG27-202ENST00000414008 ENTPD3O75355 529 aa11.61□□□□□ -0.55
HCG27-202ENST00000414008 NEFLP07196 543 aa11.61□□□□□ -0.55
HCG27-202ENST00000414008 PDE6AP16499 860 aa11.61□□□□□ -0.55
HCG27-202ENST00000414008 RHOQP17081 205 aa11.61□□□□□ -0.55
HCG27-202ENST00000414008 RGS3P49796 1198 aa11.61□□□□□ -0.55
HCG27-202ENST00000414008 ATP1A2P50993 1020 aa11.61□□□□□ -0.55
HCG27-202ENST00000414008 PDE1AP54750 535 aa11.61□□□□□ -0.55
HCG27-202ENST00000414008 PRKG1Q13976 671 aa11.61□□□□□ -0.55
HCG27-202ENST00000414008 ARMC9Q7Z3E5 817 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms