RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 SEPT4O43236 478 aa29.31■■■□□ 2.28
AC005540.1-201ENST00000413911 RTP1P59025 263 aa29.31■■■□□ 2.28
AC005540.1-201ENST00000413911 MAML3Q96JK9 1138 aa29.31■■■□□ 2.28
AC005540.1-201ENST00000413911 COL11A1P12107 1806 aaPredicted RBP29.31■■■□□ 2.28
AC005540.1-201ENST00000413911 KANSL2Q9H9L4 492 aa29.3■■■□□ 2.28
AC005540.1-201ENST00000413911 STRBPQ96SI9 672 aaKnown RBP29.29■■■□□ 2.28
AC005540.1-201ENST00000413911 CHMP4BQ9H444 224 aaKnown RBP29.29■■■□□ 2.28
AC005540.1-201ENST00000413911 MTMR10Q9NXD2 777 aa29.29■■■□□ 2.28
AC005540.1-201ENST00000413911 ZNFX1Q9P2E3 1918 aaKnown RBP29.28■■■□□ 2.28
AC005540.1-201ENST00000413911 FCER1AP12319 257 aa29.28■■■□□ 2.28
AC005540.1-201ENST00000413911 AMOTL1Q8IY63 956 aa29.28■■■□□ 2.28
AC005540.1-201ENST00000413911 ARRDC4Q8NCT1 418 aa29.28■■■□□ 2.28
AC005540.1-201ENST00000413911 REPS2Q8NFH8 660 aa29.28■■■□□ 2.28
AC005540.1-201ENST00000413911 VWA5AO00534 786 aa29.27■■■□□ 2.28
AC005540.1-201ENST00000413911 PGK2P07205 417 aa29.27■■■□□ 2.28
AC005540.1-201ENST00000413911 FAM83BQ5T0W9 1011 aa29.27■■■□□ 2.28
AC005540.1-201ENST00000413911 ZSCAN25Q6NSZ9 544 aa29.27■■■□□ 2.28
AC005540.1-201ENST00000413911 SLC39A5Q6ZMH5 540 aa29.27■■■□□ 2.28
AC005540.1-201ENST00000413911 RIOX2Q8IUF8 465 aa29.27■■■□□ 2.28
AC005540.1-201ENST00000413911 DDRGK1Q96HY6 314 aa29.27■■■□□ 2.28
AC005540.1-201ENST00000413911 SLC5A4Q9NY91 659 aa29.27■■■□□ 2.28
AC005540.1-201ENST00000413911 ATP11BQ9Y2G3 1177 aa29.27■■■□□ 2.28
AC005540.1-201ENST00000413911 GREB1LQ9C091 1923 aaPredicted RBP29.27■■■□□ 2.28
AC005540.1-201ENST00000413911 GSG1L2A8MUP6 293 aa29.26■■■□□ 2.27
AC005540.1-201ENST00000413911 SLC25A27O95847 323 aa29.26■■■□□ 2.27
AC005540.1-201ENST00000413911 FAM47AQ5JRC9 791 aa29.26■■■□□ 2.27
AC005540.1-201ENST00000413911 TSHZ3Q63HK5 1081 aa29.26■■■□□ 2.27
AC005540.1-201ENST00000413911 STK11IPQ8N1F8 1099 aa29.26■■■□□ 2.27
AC005540.1-201ENST00000413911 OSBP2Q969R2 916 aa29.26■■■□□ 2.27
AC005540.1-201ENST00000413911 ECHDC1Q9NTX5 307 aa29.26■■■□□ 2.27
AC005540.1-201ENST00000413911 ZNF214Q9UL59 606 aaPredicted RBP29.26■■■□□ 2.27
AC005540.1-201ENST00000413911 PPP1R9AQ9ULJ8 1098 aa29.26■■■□□ 2.27
AC005540.1-201ENST00000413911 LTBP2Q14767 1821 aa29.26■■■□□ 2.27
AC005540.1-201ENST00000413911 MYCNP04198 464 aaPredicted RBP29.25■■■□□ 2.27
AC005540.1-201ENST00000413911 RASA1P20936 1047 aa29.25■■■□□ 2.27
AC005540.1-201ENST00000413911 LRRC41Q15345 812 aa29.25■■■□□ 2.27
AC005540.1-201ENST00000413911 MMP19Q99542 508 aa29.25■■■□□ 2.27
AC005540.1-201ENST00000413911 NUP88Q99567 741 aaPredicted RBP29.25■■■□□ 2.27
AC005540.1-201ENST00000413911 LBHD1Q9BQE6 289 aaPredicted RBP29.25■■■□□ 2.27
AC005540.1-201ENST00000413911 ARPP21Q9UBL0 812 aaPredicted RBP29.25■■■□□ 2.27
AC005540.1-201ENST00000413911 KBTBD13C9JR72 458 aa29.24■■■□□ 2.27
AC005540.1-201ENST00000413911 TAL1P17542 331 aaPredicted RBP29.24■■■□□ 2.27
AC005540.1-201ENST00000413911 STAT3P40763 770 aa29.24■■■□□ 2.27
AC005540.1-201ENST00000413911 ADCYAP1R1P41586 468 aa29.24■■■□□ 2.27
AC005540.1-201ENST00000413911 ZNF792Q3KQV3 632 aa29.24■■■□□ 2.27
AC005540.1-201ENST00000413911 SBK1Q52WX2 424 aa29.24■■■□□ 2.27
AC005540.1-201ENST00000413911 GOPCQ9HD26 462 aa29.24■■■□□ 2.27
AC005540.1-201ENST00000413911 SMCHD1A6NHR9 2005 aa29.23■■■□□ 2.27
AC005540.1-201ENST00000413911 RAD21O60216 631 aa29.23■■■□□ 2.27
AC005540.1-201ENST00000413911 SNX17Q15036 470 aa29.23■■■□□ 2.27
AC005540.1-201ENST00000413911 TRIM60Q495X7 471 aa29.23■■■□□ 2.27
AC005540.1-201ENST00000413911 KBTBD3Q8NAB2 608 aa29.23■■■□□ 2.27
AC005540.1-201ENST00000413911 FERMT2Q96AC1 680 aa29.23■■■□□ 2.27
AC005540.1-201ENST00000413911 STXBP5LQ9Y2K9 1186 aa29.23■■■□□ 2.27
AC005540.1-201ENST00000413911 EPB41L4AQ9HCS5 686 aaPredicted RBP29.22■■■□□ 2.27
AC005540.1-201ENST00000413911 POTEB2H3BUK9 544 aa29.21■■■□□ 2.27
AC005540.1-201ENST00000413911 DLL1O00548 723 aa29.21■■■□□ 2.27
AC005540.1-201ENST00000413911 TINF2Q9BSI4 451 aa29.21■■■□□ 2.27
AC005540.1-201ENST00000413911 DCTPP1Q9H773 170 aa29.21■■■□□ 2.27
AC005540.1-201ENST00000413911 MINDY4BA8MYZ0 360 aa29.2■■■□□ 2.26
AC005540.1-201ENST00000413911 SH3RF1Q7Z6J0 888 aa29.2■■■□□ 2.26
AC005540.1-201ENST00000413911 PRKAG2Q9UGJ0 569 aa29.2■■■□□ 2.26
AC005540.1-201ENST00000413911 ROBO3Q96MS0 1386 aa29.2■■■□□ 2.26
AC005540.1-201ENST00000413911 PLXNA1Q9UIW2 1896 aa29.19■■■□□ 2.26
AC005540.1-201ENST00000413911 UNC80Q8N2C7 3258 aa29.19■■■□□ 2.26
AC005540.1-201ENST00000413911 ZNF865P0CJ78 1059 aaPredicted RBP29.19■■■□□ 2.26
AC005540.1-201ENST00000413911 KCTD2Q14681 263 aa29.19■■■□□ 2.26
AC005540.1-201ENST00000413911 GIMAP6Q6P9H5 292 aa29.19■■■□□ 2.26
AC005540.1-201ENST00000413911 APPBP2Q92624 585 aa29.19■■■□□ 2.26
AC005540.1-201ENST00000413911 PDLIM7Q9NR12 457 aa29.19■■■□□ 2.26
AC005540.1-201ENST00000413911 NYAP2Q9P242 653 aa29.19■■■□□ 2.26
AC005540.1-201ENST00000413911 DIS3Q9Y2L1 958 aaKnown RBP29.19■■■□□ 2.26
AC005540.1-201ENST00000413911 RIPK3Q9Y572 518 aa29.19■■■□□ 2.26
AC005540.1-201ENST00000413911 IGKV6D-41A0A0C4DH26 115 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 TRIM43BA6NCK2 446 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 F5H6K3 240 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 M0R2C6 588 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 RNF113AO15541 343 aaKnown RBP29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 NDUFB10O96000 172 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 PGK1P00558 417 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 KLRC3Q07444 240 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 C9orf50Q5SZB4 431 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 TRIM43Q96BQ3 446 aaPredicted RBP29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 LENG1Q96BZ8 264 aaPredicted RBP29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 SLF1Q9BQI6 1058 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 MKNK2Q9HBH9 465 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 XPNPEP3Q9NQH7 507 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 PRDM5Q9NQX1 630 aaPredicted RBP29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 NRBP1Q9UHY1 535 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 PHF24Q9UPV7 400 aa29.18■■■□□ 2.26
AC005540.1-201ENST00000413911 GPAA1O43292 621 aa29.17■■■□□ 2.26
AC005540.1-201ENST00000413911 SHHQ15465 462 aa29.17■■■□□ 2.26
AC005540.1-201ENST00000413911 BADQ92934 168 aa29.17■■■□□ 2.26
AC005540.1-201ENST00000413911 GUCD1Q96NT3 240 aa29.17■■■□□ 2.26
AC005540.1-201ENST00000413911 RARBP10826 455 aa29.16■■■□□ 2.26
AC005540.1-201ENST00000413911 C1orf53Q5VUE5 145 aa29.16■■■□□ 2.26
AC005540.1-201ENST00000413911 PRDM1O75626 825 aa29.15■■■□□ 2.26
AC005540.1-201ENST00000413911 ITGB8P26012 769 aa29.15■■■□□ 2.26
AC005540.1-201ENST00000413911 TLE2Q04725 743 aa29.15■■■□□ 2.26
AC005540.1-201ENST00000413911 FAM109BQ6ICB4 259 aaPredicted RBP29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms