RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 RTP1P59025 263 aa22.4■■□□□ 1.18
ITGA6-204ENST00000412899 PRAMEF19Q5SWL8 479 aa22.4■■□□□ 1.18
ITGA6-204ENST00000412899 KANSL2Q9H9L4 492 aa22.4■■□□□ 1.18
ITGA6-204ENST00000412899 SLC25A27O95847 323 aa22.39■■□□□ 1.17
ITGA6-204ENST00000412899 CTR9Q6PD62 1173 aa22.39■■□□□ 1.17
ITGA6-204ENST00000412899 MAML3Q96JK9 1138 aa22.39■■□□□ 1.17
ITGA6-204ENST00000412899 GOPCQ9HD26 462 aa22.39■■□□□ 1.17
ITGA6-204ENST00000412899 ATP11BQ9Y2G3 1177 aa22.39■■□□□ 1.17
ITGA6-204ENST00000412899 DLL1O00548 723 aa22.38■■□□□ 1.17
ITGA6-204ENST00000412899 TMEM132BQ14DG7 1078 aa22.38■■□□□ 1.17
ITGA6-204ENST00000412899 PUS7LQ9H0K6 701 aaKnown RBP22.38■■□□□ 1.17
ITGA6-204ENST00000412899 MTMR10Q9NXD2 777 aa22.38■■□□□ 1.17
ITGA6-204ENST00000412899 SLC39A5Q6ZMH5 540 aa22.37■■□□□ 1.17
ITGA6-204ENST00000412899 MMP19Q99542 508 aa22.37■■□□□ 1.17
ITGA6-204ENST00000412899 FBXO28Q9NVF7 368 aa22.37■■□□□ 1.17
ITGA6-204ENST00000412899 ARPP21Q9UBL0 812 aaPredicted RBP22.37■■□□□ 1.17
ITGA6-204ENST00000412899 STXBP5LQ9Y2K9 1186 aa22.37■■□□□ 1.17
ITGA6-204ENST00000412899 SMARCA5O60264 1052 aaPredicted RBP22.36■■□□□ 1.17
ITGA6-204ENST00000412899 KCTD2Q14681 263 aa22.36■■□□□ 1.17
ITGA6-204ENST00000412899 RIOX2Q8IUF8 465 aa22.36■■□□□ 1.17
ITGA6-204ENST00000412899 CRBNQ96SW2 442 aa22.36■■□□□ 1.17
ITGA6-204ENST00000412899 ADAMTS5Q9UNA0 930 aa22.36■■□□□ 1.17
ITGA6-204ENST00000412899 STAT3P40763 770 aa22.35■■□□□ 1.17
ITGA6-204ENST00000412899 FAM83BQ5T0W9 1011 aa22.35■■□□□ 1.17
ITGA6-204ENST00000412899 PRDM5Q9NQX1 630 aaPredicted RBP22.35■■□□□ 1.17
ITGA6-204ENST00000412899 LAMA3Q16787 3333 aa22.34■■□□□ 1.17
ITGA6-204ENST00000412899 VWA5AO00534 786 aa22.34■■□□□ 1.17
ITGA6-204ENST00000412899 PGK2P07205 417 aa22.34■■□□□ 1.17
ITGA6-204ENST00000412899 ADCYAP1R1P41586 468 aa22.34■■□□□ 1.17
ITGA6-204ENST00000412899 LRRC41Q15345 812 aa22.34■■□□□ 1.17
ITGA6-204ENST00000412899 FAM47AQ5JRC9 791 aa22.34■■□□□ 1.17
ITGA6-204ENST00000412899 STK11IPQ8N1F8 1099 aa22.34■■□□□ 1.17
ITGA6-204ENST00000412899 FERMT2Q96AC1 680 aa22.34■■□□□ 1.17
ITGA6-204ENST00000412899 ECHDC1Q9NTX5 307 aa22.34■■□□□ 1.17
ITGA6-204ENST00000412899 PPP1R9AQ9ULJ8 1098 aa22.34■■□□□ 1.17
ITGA6-204ENST00000412899 MYH7P12883 1935 aa22.33■■□□□ 1.17
ITGA6-204ENST00000412899 TRIM60Q495X7 471 aa22.33■■□□□ 1.17
ITGA6-204ENST00000412899 STRBPQ96SI9 672 aaKnown RBP22.33■■□□□ 1.17
ITGA6-204ENST00000412899 MKNK2Q9HBH9 465 aa22.33■■□□□ 1.17
ITGA6-204ENST00000412899 NRBP1Q9UHY1 535 aa22.33■■□□□ 1.17
ITGA6-204ENST00000412899 PARP14Q460N5 1801 aa22.32■■□□□ 1.16
ITGA6-204ENST00000412899 RARBP10826 455 aa22.32■■□□□ 1.16
ITGA6-204ENST00000412899 COPB2P35606 906 aa22.32■■□□□ 1.16
ITGA6-204ENST00000412899 TINF2Q9BSI4 451 aa22.32■■□□□ 1.16
ITGA6-204ENST00000412899 XPNPEP3Q9NQH7 507 aa22.32■■□□□ 1.16
ITGA6-204ENST00000412899 ZNF214Q9UL59 606 aaPredicted RBP22.32■■□□□ 1.16
ITGA6-204ENST00000412899 DIS3Q9Y2L1 958 aaKnown RBP22.32■■□□□ 1.16
ITGA6-204ENST00000412899 PCDHB15Q9Y5E8 787 aa22.32■■□□□ 1.16
ITGA6-204ENST00000412899 MINDY4BA8MYZ0 360 aa22.31■■□□□ 1.16
ITGA6-204ENST00000412899 ZNF792Q3KQV3 632 aa22.31■■□□□ 1.16
ITGA6-204ENST00000412899 SBK1Q52WX2 424 aa22.31■■□□□ 1.16
ITGA6-204ENST00000412899 KBTBD3Q8NAB2 608 aa22.31■■□□□ 1.16
ITGA6-204ENST00000412899 GPATCH3Q96I76 525 aa22.31■■□□□ 1.16
ITGA6-204ENST00000412899 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.31■■□□□ 1.16
ITGA6-204ENST00000412899 COL11A1P12107 1806 aaPredicted RBP22.31■■□□□ 1.16
ITGA6-204ENST00000412899 GSG1L2A8MUP6 293 aa22.3■■□□□ 1.16
ITGA6-204ENST00000412899 RASA1P20936 1047 aa22.3■■□□□ 1.16
ITGA6-204ENST00000412899 SNX17Q15036 470 aa22.3■■□□□ 1.16
ITGA6-204ENST00000412899 GIMAP6Q6P9H5 292 aa22.3■■□□□ 1.16
ITGA6-204ENST00000412899 RNF180Q86T96 592 aa22.3■■□□□ 1.16
ITGA6-204ENST00000412899 NUP88Q99567 741 aaPredicted RBP22.3■■□□□ 1.16
ITGA6-204ENST00000412899 SLF1Q9BQI6 1058 aa22.3■■□□□ 1.16
ITGA6-204ENST00000412899 ZNFX1Q9P2E3 1918 aaKnown RBP22.29■■□□□ 1.16
ITGA6-204ENST00000412899 POTEB2H3BUK9 544 aa22.29■■□□□ 1.16
ITGA6-204ENST00000412899 FAM109BQ6ICB4 259 aaPredicted RBP22.29■■□□□ 1.16
ITGA6-204ENST00000412899 REPS2Q8NFH8 660 aa22.29■■□□□ 1.16
ITGA6-204ENST00000412899 APPBP2Q92624 585 aa22.29■■□□□ 1.16
ITGA6-204ENST00000412899 BADQ92934 168 aa22.29■■□□□ 1.16
ITGA6-204ENST00000412899 OSBP2Q969R2 916 aa22.29■■□□□ 1.16
ITGA6-204ENST00000412899 DCTPP1Q9H773 170 aa22.29■■□□□ 1.16
ITGA6-204ENST00000412899 NYAP2Q9P242 653 aa22.29■■□□□ 1.16
ITGA6-204ENST00000412899 PHF24Q9UPV7 400 aa22.29■■□□□ 1.16
ITGA6-204ENST00000412899 CNPY2Q9Y2B0 182 aa22.29■■□□□ 1.16
ITGA6-204ENST00000412899 F5H6K3 240 aa22.28■■□□□ 1.16
ITGA6-204ENST00000412899 PGK1P00558 417 aa22.28■■□□□ 1.16
ITGA6-204ENST00000412899 TAL1P17542 331 aaPredicted RBP22.28■■□□□ 1.16
ITGA6-204ENST00000412899 SLC4A3P48751 1232 aa22.28■■□□□ 1.16
ITGA6-204ENST00000412899 KLRC3Q07444 240 aa22.28■■□□□ 1.16
ITGA6-204ENST00000412899 SHHQ15465 462 aa22.28■■□□□ 1.16
ITGA6-204ENST00000412899 C1orf53Q5VUE5 145 aa22.28■■□□□ 1.16
ITGA6-204ENST00000412899 SNRNP48Q6IEG0 339 aaKnown RBP22.28■■□□□ 1.16
ITGA6-204ENST00000412899 DDX11Q96FC9 970 aa22.28■■□□□ 1.16
ITGA6-204ENST00000412899 FAM161BQ96MY7 647 aa22.28■■□□□ 1.16
ITGA6-204ENST00000412899 TEX13BQ9BXU2 312 aa22.28■■□□□ 1.16
ITGA6-204ENST00000412899 PDLIM7Q9NR12 457 aa22.28■■□□□ 1.16
ITGA6-204ENST00000412899 CTDP1Q9Y5B0 961 aaPredicted RBP22.28■■□□□ 1.16
ITGA6-204ENST00000412899 SUPT16HQ9Y5B9 1047 aaKnown RBP22.28■■□□□ 1.16
ITGA6-204ENST00000412899 LTBP2Q14767 1821 aa22.27■■□□□ 1.16
ITGA6-204ENST00000412899 RNF113AO15541 343 aaKnown RBP22.27■■□□□ 1.16
ITGA6-204ENST00000412899 APPP05067 770 aa22.27■■□□□ 1.16
ITGA6-204ENST00000412899 AKR1A1P14550 325 aa22.27■■□□□ 1.16
ITGA6-204ENST00000412899 TDO2P48775 406 aa22.27■■□□□ 1.16
ITGA6-204ENST00000412899 ZNF697Q5TEC3 545 aa22.27■■□□□ 1.16
ITGA6-204ENST00000412899 SH3RF1Q7Z6J0 888 aa22.27■■□□□ 1.16
ITGA6-204ENST00000412899 ZNF444Q8N0Y2 327 aaPredicted RBP22.27■■□□□ 1.16
ITGA6-204ENST00000412899 PRPF38AQ8NAV1 312 aaKnown RBP22.27■■□□□ 1.16
ITGA6-204ENST00000412899 ZNF287Q9HBT7 754 aa22.27■■□□□ 1.16
ITGA6-204ENST00000412899 CLIP2Q9UDT6 1046 aa22.27■■□□□ 1.16
ITGA6-204ENST00000412899 ROBO3Q96MS0 1386 aa22.26■■□□□ 1.15
ITGA6-204ENST00000412899 GPAA1O43292 621 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms