RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 KCTD1Q719H9 257 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 TNPO2O14787 897 aaKnown RBP14.12□□□□□ -0.15
NEDD1-202ENST00000411739 WDR78Q5VTH9 848 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 HOXC10Q9NYD6 342 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 MORF4L1Q9UBU8 362 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 HPS5Q9UPZ3 1129 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 CCDC85CA6NKD9 419 aa14.11□□□□□ -0.15
NEDD1-202ENST00000411739 SLC27A2O14975 620 aa14.11□□□□□ -0.15
NEDD1-202ENST00000411739 SLC4A3P48751 1232 aa14.11□□□□□ -0.15
NEDD1-202ENST00000411739 KIFC2Q96AC6 838 aa14.11□□□□□ -0.15
NEDD1-202ENST00000411739 TCP11L1Q9NUJ3 509 aa14.11□□□□□ -0.15
NEDD1-202ENST00000411739 LAMA4Q16363 1823 aa14.11□□□□□ -0.15
NEDD1-202ENST00000411739 PCP11498 1178 aaKnown RBP14.1□□□□□ -0.15
NEDD1-202ENST00000411739 SLC1A4P43007 532 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 SNAP25P60880 206 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 CREB3L3Q68CJ9 461 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 FBXO46Q6PJ61 603 aaPredicted RBP14.1□□□□□ -0.15
NEDD1-202ENST00000411739 GMCL1P1Q8NEA9 526 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 KRT23Q9C075 422 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 SRRDQ9UH36 339 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 RABGAP1Q9Y3P9 1069 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 FRMPD2Q68DX3 1309 aaPredicted RBP14.1□□□□□ -0.15
NEDD1-202ENST00000411739 TMEM232C9JQI7 657 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 BMP3P12645 472 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 LBX2Q6XYB7 198 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 CCAR1Q8IX12 1150 aaKnown RBP14.1□□□□□ -0.15
NEDD1-202ENST00000411739 DOCK3Q8IZD9 2030 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 ZSCAN10Q96SZ4 725 aaPredicted RBP14.1□□□□□ -0.15
NEDD1-202ENST00000411739 MYPNQ86TC9 1320 aa14.1□□□□□ -0.15
NEDD1-202ENST00000411739 TOP1P11387 765 aaKnown RBP14.09□□□□□ -0.15
NEDD1-202ENST00000411739 NOVP48745 357 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 FLT3LGP49771 235 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 IKQ13123 557 aaPredicted RBP14.09□□□□□ -0.15
NEDD1-202ENST00000411739 NECTIN1Q15223 517 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 CCDC96Q2M329 555 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 TTBK2Q6IQ55 1244 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 ENAHQ8N8S7 591 aaPredicted RBP14.09□□□□□ -0.15
NEDD1-202ENST00000411739 SH3TC2Q8TF17 1288 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 SLF1Q9BQI6 1058 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 SENP2Q9HC62 589 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 GPCPD1Q9NPB8 672 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 PPP1R9AQ9ULJ8 1098 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 RLFQ13129 1914 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 TRDNQ13061 729 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 TMEM132BQ14DG7 1078 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 ARHGEF6Q15052 776 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 PKN2Q16513 984 aaKnown RBP14.09□□□□□ -0.15
NEDD1-202ENST00000411739 IQCA1Q86XH1 822 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 CNNM2Q9H8M5 875 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 TNKSO95271 1327 aa14.09□□□□□ -0.15
NEDD1-202ENST00000411739 VWA5AO00534 786 aa14.08□□□□□ -0.15
NEDD1-202ENST00000411739 SLC16A2P36021 539 aa14.08□□□□□ -0.15
NEDD1-202ENST00000411739 RALYLQ86SE5 291 aaKnown RBP14.08□□□□□ -0.15
NEDD1-202ENST00000411739 RAET1EQ8TD07 263 aa14.08□□□□□ -0.15
NEDD1-202ENST00000411739 COA7Q96BR5 231 aa14.08□□□□□ -0.15
NEDD1-202ENST00000411739 UBAC1Q9BSL1 405 aa14.08□□□□□ -0.15
NEDD1-202ENST00000411739 MOV10L1Q9BXT6 1211 aaKnown RBP14.08□□□□□ -0.15
NEDD1-202ENST00000411739 CWC22Q9HCG8 908 aaKnown RBP14.08□□□□□ -0.15
NEDD1-202ENST00000411739 GPHNQ9NQX3 736 aaPredicted RBP14.08□□□□□ -0.15
NEDD1-202ENST00000411739 GOLGA8HP0CJ92 632 aa14.08□□□□□ -0.16
NEDD1-202ENST00000411739 RASEFQ8IZ41 740 aa14.08□□□□□ -0.16
NEDD1-202ENST00000411739 CPXCR1Q8N123 301 aa14.08□□□□□ -0.16
NEDD1-202ENST00000411739 NCOA7Q8NI08 942 aa14.08□□□□□ -0.16
NEDD1-202ENST00000411739 SPATC1LQ9H0A9 340 aa14.08□□□□□ -0.16
NEDD1-202ENST00000411739 CPVLQ9H3G5 476 aa14.08□□□□□ -0.16
NEDD1-202ENST00000411739 MGAMO43451 1857 aa14.08□□□□□ -0.16
NEDD1-202ENST00000411739 ELNP15502 786 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 TAL1P17542 331 aaPredicted RBP14.07□□□□□ -0.16
NEDD1-202ENST00000411739 HOXD10P28358 340 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 ANTXR2P58335 489 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 GPR142Q7Z601 462 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 NCAPG2Q86XI2 1143 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 GTF3C2Q8WUA4 911 aaPredicted RBP14.07□□□□□ -0.16
NEDD1-202ENST00000411739 GMCL1Q96IK5 515 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 ERCC3P19447 782 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 CYP2B6P20813 491 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 PRPF38AQ8NAV1 312 aaKnown RBP14.07□□□□□ -0.16
NEDD1-202ENST00000411739 TTC14Q96N46 770 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 LRRC2Q9BYS8 371 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 KAT14Q9H8E8 782 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 RAVER2Q9HCJ3 691 aaKnown RBP14.07□□□□□ -0.16
NEDD1-202ENST00000411739 FEM1BQ9UK73 627 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 GJD2Q9UKL4 321 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 ADAMTS5Q9UNA0 930 aa14.07□□□□□ -0.16
NEDD1-202ENST00000411739 IFIT3O14879 490 aaKnown RBP14.06□□□□□ -0.16
NEDD1-202ENST00000411739 PDHBP11177 359 aa14.06□□□□□ -0.16
NEDD1-202ENST00000411739 DGKHQ86XP1 1220 aa14.06□□□□□ -0.16
NEDD1-202ENST00000411739 MB21D2Q8IYB1 491 aaPredicted RBP14.06□□□□□ -0.16
NEDD1-202ENST00000411739 PNMA1Q8ND90 353 aa14.06□□□□□ -0.16
NEDD1-202ENST00000411739 REPS2Q8NFH8 660 aa14.06□□□□□ -0.16
NEDD1-202ENST00000411739 CCNA1P78396 465 aa14.06□□□□□ -0.16
NEDD1-202ENST00000411739 SLC9C1Q4G0N8 1177 aa14.06□□□□□ -0.16
NEDD1-202ENST00000411739 IFIT1BQ5T764 474 aaKnown RBP14.06□□□□□ -0.16
NEDD1-202ENST00000411739 PLEKHH3Q7Z736 793 aa14.06□□□□□ -0.16
NEDD1-202ENST00000411739 TCEANC2Q96MN5 208 aa14.06□□□□□ -0.16
NEDD1-202ENST00000411739 SYNPO2Q9UMS6 1093 aa14.06□□□□□ -0.16
NEDD1-202ENST00000411739 RIPK3Q9Y572 518 aa14.06□□□□□ -0.16
NEDD1-202ENST00000411739 GNRH1P01148 92 aa14.05□□□□□ -0.16
NEDD1-202ENST00000411739 MAPK4P31152 587 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms