RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 SHROOM1Q2M3G4 852 aaPredicted RBP16.42■□□□□ 0.22
MINDY4-202ENST00000409881 DCAF15Q66K64 600 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.42■□□□□ 0.22
MINDY4-202ENST00000409881 BRF1Q92994 677 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 CDCA5Q96FF9 252 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 ZSCAN10Q96SZ4 725 aaPredicted RBP16.42■□□□□ 0.22
MINDY4-202ENST00000409881 FZD1Q9UP38 647 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 TNKSO95271 1327 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 GOLGA6L4A6NEF3 574 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 CDK11BP21127 795 aaKnown RBP16.42■□□□□ 0.22
MINDY4-202ENST00000409881 ZNF165P49910 485 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 TOB2Q14106 344 aaPredicted RBP16.42■□□□□ 0.22
MINDY4-202ENST00000409881 RRP1BQ14684 758 aaKnown RBP16.42■□□□□ 0.22
MINDY4-202ENST00000409881 NEDD1Q8NHV4 660 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 CCDC17Q96LX7 622 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 SSC5DA1L4H1 1573 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 SH2B2O14492 632 aaPredicted RBP16.41■□□□□ 0.22
MINDY4-202ENST00000409881 NT5C2P49902 561 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 ELF2Q15723 593 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 ABCB5Q2M3G0 1257 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 FBXO38Q6PIJ6 1188 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 ANGEL1Q9UNK9 670 aaKnown RBP16.41■□□□□ 0.22
MINDY4-202ENST00000409881 MAP3K10Q02779 954 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 ANKRD1Q15327 319 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 IGDCC4Q8TDY8 1250 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 ZSCAN31Q96LW9 406 aaPredicted RBP16.41■□□□□ 0.22
MINDY4-202ENST00000409881 ZNF341Q9BYN7 854 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 SENP2Q9HC62 589 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
MINDY4-202ENST00000409881 IL17RBQ9NRM6 502 aa16.41■□□□□ 0.22
MINDY4-202ENST00000409881 NAP1L2Q9ULW6 460 aaPredicted RBP16.41■□□□□ 0.22
MINDY4-202ENST00000409881 WTAPQ15007 396 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 NFXL1Q6ZNB6 911 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 CLEC10AQ8IUN9 316 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 ENAHQ8N8S7 591 aaPredicted RBP16.4■□□□□ 0.22
MINDY4-202ENST00000409881 TRAF5O00463 557 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 NR1I2O75469 434 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 GH2P01242 217 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 PTPN14Q15678 1187 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 LRRC8AQ8IWT6 810 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 SPATA32Q96LK8 384 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.4■□□□□ 0.22
MINDY4-202ENST00000409881 ALDH8A1Q9H2A2 487 aaPredicted RBP16.4■□□□□ 0.22
MINDY4-202ENST00000409881 LY9Q9HBG7 655 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 CABP5Q9NP86 173 aa16.4■□□□□ 0.22
MINDY4-202ENST00000409881 TRMT1Q9NXH9 659 aaKnown RBP16.4■□□□□ 0.22
MINDY4-202ENST00000409881 PLIN4Q96Q06 1357 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 ELP1O95163 1332 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 NF2P35240 595 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 JAG1P78504 1218 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
MINDY4-202ENST00000409881 CEP95Q96GE4 821 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 TIGD1Q96MW7 591 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 CLSTN2Q9H4D0 955 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 TPCN1Q9ULQ1 816 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 STX8Q9UNK0 236 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 PHF20L1A8MW92 1017 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 SEC23AQ15436 765 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
MINDY4-202ENST00000409881 TMEM179Q6ZVK1 233 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 WRNIP1Q96S55 665 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 MTA3Q9BTC8 594 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 AGXT2Q9BYV1 514 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 TCP11L1Q9NUJ3 509 aa16.39■□□□□ 0.21
MINDY4-202ENST00000409881 CAP2P40123 477 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 ATP2B2Q01814 1243 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 FMR1Q06787 632 aaKnown RBP eCLIP16.38■□□□□ 0.21
MINDY4-202ENST00000409881 SEPT2Q15019 361 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 ZNF408Q9H9D4 720 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 DDX19AQ9NUU7 478 aaKnown RBP16.38■□□□□ 0.21
MINDY4-202ENST00000409881 FAM53CQ9NYF3 392 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 ZBTB21Q9ULJ3 1066 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.38■□□□□ 0.21
MINDY4-202ENST00000409881 KLF18A0A0U1RQI7 1052 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 CCDC69A6NI79 296 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 INPP5BP32019 993 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 TTLL12Q14166 644 aaPredicted RBP16.38■□□□□ 0.21
MINDY4-202ENST00000409881 CCDC178Q5BJE1 867 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 FBXL16Q8N461 479 aa16.38■□□□□ 0.21
MINDY4-202ENST00000409881 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.38■□□□□ 0.21
MINDY4-202ENST00000409881 PPP1R12BO60237 982 aaPredicted RBP16.37■□□□□ 0.21
MINDY4-202ENST00000409881 SKILP12757 684 aa16.37■□□□□ 0.21
MINDY4-202ENST00000409881 LIFRP42702 1097 aa16.37■□□□□ 0.21
MINDY4-202ENST00000409881 RCSD1Q6JBY9 416 aa16.37■□□□□ 0.21
MINDY4-202ENST00000409881 CHADLQ6NUI6 762 aa16.37■□□□□ 0.21
MINDY4-202ENST00000409881 RBM43Q6ZSC3 357 aaKnown RBP16.37■□□□□ 0.21
MINDY4-202ENST00000409881 NYAP1Q6ZVC0 841 aa16.37■□□□□ 0.21
MINDY4-202ENST00000409881 BICD2Q8TD16 824 aa16.37■□□□□ 0.21
MINDY4-202ENST00000409881 LEO1Q8WVC0 666 aaPredicted RBP16.37■□□□□ 0.21
MINDY4-202ENST00000409881 MTMR4Q9NYA4 1195 aa16.37■□□□□ 0.21
MINDY4-202ENST00000409881 IGKV6D-41A0A0C4DH26 115 aa16.37■□□□□ 0.21
MINDY4-202ENST00000409881 GUCY1A2P33402 732 aa16.37■□□□□ 0.21
MINDY4-202ENST00000409881 STK3Q13188 491 aa16.37■□□□□ 0.21
MINDY4-202ENST00000409881 CTNND1O60716 968 aaKnown RBP16.36■□□□□ 0.21
MINDY4-202ENST00000409881 USP2O75604 605 aaPredicted RBP16.36■□□□□ 0.21
MINDY4-202ENST00000409881 YY1P25490 414 aa16.36■□□□□ 0.21
MINDY4-202ENST00000409881 ICA1Q05084 483 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms