RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 MROH7-TTC4A0A0A0MT08 1334 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 FAM205AQ6ZU69 1335 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 BAZ2AQ9UIF9 1905 aaKnown RBP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 PALM3A6NDB9 673 aaPredicted RBP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 RANBP6O60518 1105 aaKnown RBP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 NPR1P16066 1061 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 ALDH1B1P30837 517 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 PDE6BP35913 854 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 ME1P48163 572 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 FAM160A1Q05DH4 1040 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 GNL2Q13823 731 aaKnown RBP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 STK38Q15208 465 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 SF3A1Q15459 793 aaKnown RBP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 IFIT1BQ5T764 474 aaKnown RBP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 CRACR2BQ8N4Y2 399 aaPredicted RBP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 PBXIP1Q96AQ6 731 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 PRR14Q9BWN1 585 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 SLC26A6Q9BXS9 759 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 MKRN1Q9UHC7 482 aaKnown RBP8.66□□□□□ -1.02
CXCR4-202ENST00000409817 ATP6V0A2Q9Y487 856 aa8.66□□□□□ -1.02
CXCR4-202ENST00000409817 LTBP1Q14766 1721 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
CXCR4-202ENST00000409817 SPTLC2O15270 562 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 KINO60870 393 aaKnown RBP8.65□□□□□ -1.02
CXCR4-202ENST00000409817 PPP6R2O75170 966 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 RFX1P22670 979 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 AKAP17AQ02040 695 aaKnown RBP8.65□□□□□ -1.02
CXCR4-202ENST00000409817 ANO1Q5XXA6 986 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 RAB11FIP4Q86YS3 637 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 CCAR1Q8IX12 1150 aaKnown RBP8.65□□□□□ -1.02
CXCR4-202ENST00000409817 ENAHQ8N8S7 591 aaPredicted RBP8.65□□□□□ -1.02
CXCR4-202ENST00000409817 TBC1D16Q8TBP0 767 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 FAM200AQ8TCP9 573 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 MRPS27Q92552 414 aaKnown RBP8.65□□□□□ -1.02
CXCR4-202ENST00000409817 PHKBQ93100 1093 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 MAP3K14Q99558 947 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 COA1Q9GZY4 146 aa8.65□□□□□ -1.02
CXCR4-202ENST00000409817 TMX4Q9H1E5 349 aaPredicted RBP8.65□□□□□ -1.02
CXCR4-202ENST00000409817 FOXP1Q9H334 677 aaPredicted RBP8.65□□□□□ -1.02
CXCR4-202ENST00000409817 MYH2Q9UKX2 1941 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 GPR75-ASB3A0A0A6YYF3 556 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 NR1I2O75469 434 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 APBA3O96018 575 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 MMP1P03956 469 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 POLR3DP05423 398 aaPredicted RBP8.64□□□□□ -1.03
CXCR4-202ENST00000409817 RXRAP19793 462 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 USP5P45974 858 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 CEBPZQ03701 1054 aaKnown RBP8.64□□□□□ -1.03
CXCR4-202ENST00000409817 SLC39A14Q15043 492 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 C12orf60Q5U649 245 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 OTUD7BQ6GQQ9 843 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 SASS6Q6UVJ0 657 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 NBPF11Q86T75 865 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 DGKHQ86XP1 1220 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 RNF214Q8ND24 703 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 ENGASEQ8NFI3 743 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 ANKS1AQ92625 1134 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 ZKSCAN3Q9BRR0 538 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 MYL10Q9BUA6 226 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.64□□□□□ -1.03
CXCR4-202ENST00000409817 MCM9Q9NXL9 1143 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 TSR3Q9UJK0 312 aaKnown RBP8.64□□□□□ -1.03
CXCR4-202ENST00000409817 PCDHA7Q9UN72 937 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 MORC2Q9Y6X9 1032 aaPredicted RBP8.64□□□□□ -1.03
CXCR4-202ENST00000409817 ECM29Q5VYK3 1845 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 ESPNB1AK53 854 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 KIF28PB7ZC32 967 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 PRPF3O43395 683 aaKnown RBP8.64□□□□□ -1.03
CXCR4-202ENST00000409817 SRGNP10124 158 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 RXRBP28702 533 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 TYRO3Q06418 890 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 TROAPQ12815 778 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 RILPL1Q5EBL4 403 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 COL23A1Q86Y22 540 aaPredicted RBP8.64□□□□□ -1.03
CXCR4-202ENST00000409817 NOSTRINQ8IVI9 506 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 CCDC144CPQ8IYA2 1237 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 CTCFLQ8NI51 663 aaPredicted RBP8.64□□□□□ -1.03
CXCR4-202ENST00000409817 NUP133Q8WUM0 1156 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 RTFDC1Q9BY42 306 aaPredicted RBP8.64□□□□□ -1.03
CXCR4-202ENST00000409817 TCP11L1Q9NUJ3 509 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 MAP10Q9P2G4 905 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 PARP3Q9Y6F1 533 aa8.64□□□□□ -1.03
CXCR4-202ENST00000409817 ANKRD31Q8N7Z5 1873 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 GAKO14976 1311 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 TSPY2A6NKD2 308 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 PPFIA3O75145 1194 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 FBXO45P0C2W1 286 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 CMA1P23946 247 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 KIF5BP33176 963 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 SNW1Q13573 536 aaKnown RBP8.63□□□□□ -1.03
CXCR4-202ENST00000409817 ZNF827Q17R98 1081 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 MFSD14BQ5SR56 506 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 ZSCAN30Q86W11 494 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 FAM177A1Q8N128 213 aaPredicted RBP8.63□□□□□ -1.03
CXCR4-202ENST00000409817 FSIP1Q8NA03 581 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 MASTLQ96GX5 879 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 POLLQ9UGP5 575 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 PCDHB3Q9Y5E6 796 aa8.63□□□□□ -1.03
CXCR4-202ENST00000409817 CLIC4Q9Y696 253 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms