RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 LZTS2Q9BRK4 669 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 PHF20Q9BVI0 1012 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 RBSNQ9H1K0 784 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 NUP62CLQ9H1M0 184 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 MAD2L2Q9UI95 211 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 PCDHA7Q9UN72 937 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 CNTNAP1P78357 1384 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 PAPPA2Q9BXP8 1791 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 IGKV6D-41A0A0C4DH26 115 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 PALM3A6NDB9 673 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-206ENST00000409754 SCG2P13521 617 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 SHMT1P34896 483 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 PFKFB3Q16875 520 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-206ENST00000409754 CCAR1Q8IX12 1150 aaKnown RBP16.23■□□□□ 0.19
LIMS2-206ENST00000409754 SHISA4Q96DD7 197 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 CLSTN2Q9H4D0 955 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 VPS54Q9P1Q0 977 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 ZNF70Q9UC06 446 aaPredicted RBP16.23■□□□□ 0.19
LIMS2-206ENST00000409754 FAM198AQ9UFP1 575 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 SIPA1L1O43166 1804 aa16.23■□□□□ 0.19
LIMS2-206ENST00000409754 NR1I2O75469 434 aa16.22■□□□□ 0.19
LIMS2-206ENST00000409754 AKR1B1P15121 316 aa16.22■□□□□ 0.19
LIMS2-206ENST00000409754 SMC1BQ8NDV3 1235 aa16.22■□□□□ 0.19
LIMS2-206ENST00000409754 MTMR4Q9NYA4 1195 aa16.22■□□□□ 0.19
LIMS2-206ENST00000409754 PITPNM2Q9BZ72 1349 aa16.22■□□□□ 0.19
LIMS2-206ENST00000409754 hCG_1642624A0A1W2PR95 340 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 PPP6R2O75170 966 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 ENTPD3O75355 529 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 KRT2P35908 639 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 PTPAQ15257 358 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 MAP3K11Q16584 847 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 RILPL1Q5EBL4 403 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 CCDC73Q6ZRK6 1079 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 ZFPM1Q8IX07 1006 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 STAG2Q8N3U4 1231 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 JMYQ8N9B5 988 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 CCDC17Q96LX7 622 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 FUCA2Q9BTY2 467 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 PANK2Q9BZ23 570 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 BRMS1Q9HCU9 246 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 PI4KBQ9UBF8 816 aa16.21■□□□□ 0.19
LIMS2-206ENST00000409754 COL2A1P02458 1487 aaPredicted RBP16.2■□□□□ 0.18
LIMS2-206ENST00000409754 SMARCA1P28370 1054 aa16.2■□□□□ 0.18
LIMS2-206ENST00000409754 FAM160A1Q05DH4 1040 aa16.2■□□□□ 0.18
LIMS2-206ENST00000409754 PPP4R3BQ5MIZ7 849 aa16.2■□□□□ 0.18
LIMS2-206ENST00000409754 PRAMEF18Q5VWM3 479 aa16.2■□□□□ 0.18
LIMS2-206ENST00000409754 RBM43Q6ZSC3 357 aaKnown RBP16.2■□□□□ 0.18
LIMS2-206ENST00000409754 KRT26Q7Z3Y9 468 aa16.2■□□□□ 0.18
LIMS2-206ENST00000409754 MRPS27Q92552 414 aaKnown RBP16.2■□□□□ 0.18
LIMS2-206ENST00000409754 TNMDQ9H2S6 317 aa16.2■□□□□ 0.18
LIMS2-206ENST00000409754 GOLPH3LQ9H4A5 285 aa16.2■□□□□ 0.18
LIMS2-206ENST00000409754 SH3GLB2Q9NR46 395 aa16.2■□□□□ 0.18
LIMS2-206ENST00000409754 MYH8P13535 1937 aa16.2■□□□□ 0.18
LIMS2-206ENST00000409754 ATRNL1Q5VV63 1379 aa16.2■□□□□ 0.18
LIMS2-206ENST00000409754 PARP1P09874 1014 aaKnown RBP16.19■□□□□ 0.18
LIMS2-206ENST00000409754 C1QTNF8P60827 252 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 FSTL1Q12841 308 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 NR5A1Q13285 461 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 FOXP4Q8IVH2 680 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-206ENST00000409754 FAM177A1Q8N128 213 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-206ENST00000409754 FSIP1Q8NA03 581 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 ENGASEQ8NFI3 743 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 SPZ1Q9BXG8 430 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
LIMS2-206ENST00000409754 OTOFQ9HC10 1997 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 PCNTO95613 3336 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 DDTLA6NHG4 134 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-206ENST00000409754 TTLL1O95922 423 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 TOB1P50616 345 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-206ENST00000409754 TCP10Q12799 353 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 SNW1Q13573 536 aaKnown RBP16.19■□□□□ 0.18
LIMS2-206ENST00000409754 NPY5RQ15761 445 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 AXDND1Q5T1B0 1012 aaPredicted RBP16.19■□□□□ 0.18
LIMS2-206ENST00000409754 SH3BP5LQ7L8J4 393 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 METTL16Q86W50 562 aaKnown RBP16.19■□□□□ 0.18
LIMS2-206ENST00000409754 TEPSINQ96N21 525 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 DNAJC18Q9H819 358 aa16.19■□□□□ 0.18
LIMS2-206ENST00000409754 GREB1LQ9C091 1923 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-206ENST00000409754 KLRF2D3W0D1 207 aa16.18■□□□□ 0.18
LIMS2-206ENST00000409754 CTAGE5O15320 804 aa16.18■□□□□ 0.18
LIMS2-206ENST00000409754 CMA1P23946 247 aa16.18■□□□□ 0.18
LIMS2-206ENST00000409754 SLC35G1Q2M3R5 365 aa16.18■□□□□ 0.18
LIMS2-206ENST00000409754 CST9Q5W186 159 aa16.18■□□□□ 0.18
LIMS2-206ENST00000409754 TNFRSF25Q93038 417 aa16.18■□□□□ 0.18
LIMS2-206ENST00000409754 VEZTQ9HBM0 779 aa16.18■□□□□ 0.18
LIMS2-206ENST00000409754 MORC2Q9Y6X9 1032 aaPredicted RBP16.18■□□□□ 0.18
LIMS2-206ENST00000409754 TCP10L2B9ZVM9 353 aa16.17■□□□□ 0.18
LIMS2-206ENST00000409754 CYTH3O43739 400 aa16.17■□□□□ 0.18
LIMS2-206ENST00000409754 CCDC192P0DO97 292 aa16.17■□□□□ 0.18
LIMS2-206ENST00000409754 SNHG28P0DPA3 235 aa16.17■□□□□ 0.18
LIMS2-206ENST00000409754 CALML3P27482 149 aa16.17■□□□□ 0.18
LIMS2-206ENST00000409754 NLRP5P59047 1200 aa16.17■□□□□ 0.18
LIMS2-206ENST00000409754 CAMK4Q16566 473 aa16.17■□□□□ 0.18
LIMS2-206ENST00000409754 TATDN1Q6P1N9 297 aa16.17■□□□□ 0.18
LIMS2-206ENST00000409754 ZSCAN29Q8IWY8 852 aaPredicted RBP16.17■□□□□ 0.18
LIMS2-206ENST00000409754 DCPSQ96C86 337 aaKnown RBP16.17■□□□□ 0.18
LIMS2-206ENST00000409754 CDCA5Q96FF9 252 aa16.17■□□□□ 0.18
LIMS2-206ENST00000409754 TMOD2Q9NZR1 351 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms