RNA–Protein interactions for RNA: ENST00000409712.5

SUMO1-209, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 2 BASIC

Gene SUMO1, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-209ENST00000409712 SLC12A7Q9Y666 1083 aa19.44■□□□□ 0.7
SUMO1-209ENST00000409712 BMP3P12645 472 aa19.43■□□□□ 0.7
SUMO1-209ENST00000409712 RCAN1P53805 252 aa19.43■□□□□ 0.7
SUMO1-209ENST00000409712 AK2P54819 239 aa19.43■□□□□ 0.7
SUMO1-209ENST00000409712 FAM83BQ5T0W9 1011 aa19.43■□□□□ 0.7
SUMO1-209ENST00000409712 APOA5Q6Q788 366 aa19.43■□□□□ 0.7
SUMO1-209ENST00000409712 IFNL1Q8IU54 200 aa19.43■□□□□ 0.7
SUMO1-209ENST00000409712 BRPF3Q9ULD4 1205 aa19.43■□□□□ 0.7
SUMO1-209ENST00000409712 KLF18A0A0U1RQI7 1052 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 USP17L15C9J2P7 530 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 USP17L13C9JLJ4 530 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 USP17L11C9JVI0 530 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 USP17L18D6R9N7 530 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 USP17L22D6RA61 530 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 USP17L17D6RBQ6 530 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 USP17L19D6RCP7 530 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 USP17L20D6RJB6 530 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 IGF2BP3O00425 579 aaKnown RBP eCLIP19.42■□□□□ 0.7
SUMO1-209ENST00000409712 CALM1P0DP23 149 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 CALM2P0DP24 149 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 CALM3P0DP25 149 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 APOBRQ0VD83 1088 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 USP17L24Q0WX57 530 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 GRM4Q14833 912 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 OTUD7BQ6GQQ9 843 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 SYNE3Q6ZMZ3 975 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 RASGRP2Q7LDG7 609 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 FAM43AQ8N2R8 423 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 DNAJC5GQ8N7S2 189 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 NUP88Q99567 741 aaPredicted RBP19.42■□□□□ 0.7
SUMO1-209ENST00000409712 MTMR7Q9Y216 660 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 A0A0G2JMZ2 1700 aa19.42■□□□□ 0.7
SUMO1-209ENST00000409712 PDHXO00330 501 aa19.41■□□□□ 0.7
SUMO1-209ENST00000409712 ZNF543Q08ER8 600 aa19.41■□□□□ 0.7
SUMO1-209ENST00000409712 CCDC96Q2M329 555 aa19.41■□□□□ 0.7
SUMO1-209ENST00000409712 ASPRV1Q53RT3 343 aa19.41■□□□□ 0.7
SUMO1-209ENST00000409712 GPATCH4Q5T3I0 446 aaKnown RBP19.41■□□□□ 0.7
SUMO1-209ENST00000409712 CATSPERGQ6ZRH7 1159 aa19.41■□□□□ 0.7
SUMO1-209ENST00000409712 TANGO6Q9C0B7 1094 aa19.41■□□□□ 0.7
SUMO1-209ENST00000409712 PNMA3Q9UL41 463 aa19.41■□□□□ 0.7
SUMO1-209ENST00000409712 NID2Q14112 1375 aa19.41■□□□□ 0.7
SUMO1-209ENST00000409712 ZBTB43O43298 467 aa19.4■□□□□ 0.7
SUMO1-209ENST00000409712 ST18O60284 1047 aa19.4■□□□□ 0.7
SUMO1-209ENST00000409712 PLA2G6O60733 806 aa19.4■□□□□ 0.7
SUMO1-209ENST00000409712 ALDH1A1P00352 501 aa19.4■□□□□ 0.7
SUMO1-209ENST00000409712 PARP1P09874 1014 aaKnown RBP19.4■□□□□ 0.7
SUMO1-209ENST00000409712 OSBPP22059 807 aa19.4■□□□□ 0.7
SUMO1-209ENST00000409712 KCTD1Q719H9 257 aa19.4■□□□□ 0.7
SUMO1-209ENST00000409712 NUP133Q8WUM0 1156 aa19.4■□□□□ 0.7
SUMO1-209ENST00000409712 MYL10Q9BUA6 226 aa19.4■□□□□ 0.7
SUMO1-209ENST00000409712 FEM1BQ9UK73 627 aa19.4■□□□□ 0.7
SUMO1-209ENST00000409712 MYPNQ86TC9 1320 aa19.4■□□□□ 0.7
SUMO1-209ENST00000409712 PALM3A6NDB9 673 aaPredicted RBP19.39■□□□□ 0.69
SUMO1-209ENST00000409712 GOLGA8BA8MQT2 603 aa19.39■□□□□ 0.69
SUMO1-209ENST00000409712 IRX3P78415 501 aaPredicted RBP19.39■□□□□ 0.69
SUMO1-209ENST00000409712 FAM160B2Q86V87 743 aa19.39■□□□□ 0.69
SUMO1-209ENST00000409712 MICU3Q86XE3 530 aa19.39■□□□□ 0.69
SUMO1-209ENST00000409712 CTCFLQ8NI51 663 aaPredicted RBP19.39■□□□□ 0.69
SUMO1-209ENST00000409712 CHMP4CQ96CF2 233 aa19.39■□□□□ 0.69
SUMO1-209ENST00000409712 ZNF274Q96GC6 653 aaPredicted RBP19.39■□□□□ 0.69
SUMO1-209ENST00000409712 ASCC2Q9H1I8 757 aaPredicted RBP19.39■□□□□ 0.69
SUMO1-209ENST00000409712 MAD2L2Q9UI95 211 aa19.39■□□□□ 0.69
SUMO1-209ENST00000409712 FRMPD2Q68DX3 1309 aaPredicted RBP19.39■□□□□ 0.69
SUMO1-209ENST00000409712 TMEM232C9JQI7 657 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 FLOT1O75955 427 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 COL11A1P12107 1806 aaPredicted RBP19.38■□□□□ 0.69
SUMO1-209ENST00000409712 RXRAP19793 462 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 KIF5BP33176 963 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 STAT2P52630 851 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 COG2Q14746 738 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 PPP2R5BQ15173 497 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 BTNL9Q6UXG8 535 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 FANCBQ8NB91 859 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 CHURC1Q8WUH1 139 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 PARK7Q99497 189 aaKnown RBP19.38■□□□□ 0.69
SUMO1-209ENST00000409712 GPCPD1Q9NPB8 672 aa19.38■□□□□ 0.69
SUMO1-209ENST00000409712 ISY1Q9ULR0 285 aaKnown RBP19.38■□□□□ 0.69
SUMO1-209ENST00000409712 GOLGA8AA7E2F4 631 aa19.37■□□□□ 0.69
SUMO1-209ENST00000409712 GOLGA8HP0CJ92 632 aa19.37■□□□□ 0.69
SUMO1-209ENST00000409712 PDIA3P30101 505 aaKnown RBP19.37■□□□□ 0.69
SUMO1-209ENST00000409712 TAF1CQ15572 869 aaPredicted RBP19.37■□□□□ 0.69
SUMO1-209ENST00000409712 RAB11FIP4Q86YS3 637 aa19.37■□□□□ 0.69
SUMO1-209ENST00000409712 SLF1Q9BQI6 1058 aa19.37■□□□□ 0.69
SUMO1-209ENST00000409712 LARP6Q9BRS8 491 aaKnown RBP19.37■□□□□ 0.69
SUMO1-209ENST00000409712 FBXO28Q9NVF7 368 aa19.37■□□□□ 0.69
SUMO1-209ENST00000409712 RBM28Q9NW13 759 aaKnown RBP19.37■□□□□ 0.69
SUMO1-209ENST00000409712 PPP1R9AQ9ULJ8 1098 aa19.37■□□□□ 0.69
SUMO1-209ENST00000409712 TPCN1Q9ULQ1 816 aa19.37■□□□□ 0.69
SUMO1-209ENST00000409712 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
SUMO1-209ENST00000409712 HPS5Q9UPZ3 1129 aa19.37■□□□□ 0.69
SUMO1-209ENST00000409712 SPDYE16A6NNV3 312 aaPredicted RBP19.36■□□□□ 0.69
SUMO1-209ENST00000409712 DSG3P32926 999 aa19.36■□□□□ 0.69
SUMO1-209ENST00000409712 GNAQP50148 359 aa19.36■□□□□ 0.69
SUMO1-209ENST00000409712 METAP2P50579 478 aaKnown RBP eCLIP19.36■□□□□ 0.69
SUMO1-209ENST00000409712 HERVK_113P62684 666 aa19.36■□□□□ 0.69
SUMO1-209ENST00000409712 MAP2K1Q02750 393 aaPredicted RBP19.36■□□□□ 0.69
SUMO1-209ENST00000409712 RTN1Q16799 776 aa19.36■□□□□ 0.69
SUMO1-209ENST00000409712 TTBK2Q6IQ55 1244 aa19.36■□□□□ 0.69
SUMO1-209ENST00000409712 LBX2Q6XYB7 198 aa19.36■□□□□ 0.69
SUMO1-209ENST00000409712 STAG2Q8N3U4 1231 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms