RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 C9IYK1 514 aa6.72□□□□□ -1.33
PMS1-203ENST00000409593 MEIS1O00470 390 aa6.72□□□□□ -1.33
PMS1-203ENST00000409593 PAPLNO95428 1278 aa6.72□□□□□ -1.33
PMS1-203ENST00000409593 PMS1P54277 932 aaKnown RBP6.72□□□□□ -1.33
PMS1-203ENST00000409593 GNL2Q13823 731 aaKnown RBP6.72□□□□□ -1.33
PMS1-203ENST00000409593 PPP2R5EQ16537 467 aa6.72□□□□□ -1.33
PMS1-203ENST00000409593 RALGPS1Q5JS13 557 aa6.72□□□□□ -1.33
PMS1-203ENST00000409593 ATG4DQ86TL0 474 aaPredicted RBP6.72□□□□□ -1.33
PMS1-203ENST00000409593 PRAMEF1O95521 474 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 TP53P04637 393 aaPredicted RBP6.71□□□□□ -1.33
PMS1-203ENST00000409593 JUNBP17275 347 aaPredicted RBP6.71□□□□□ -1.33
PMS1-203ENST00000409593 ITGB5P18084 799 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 GIPRP48546 466 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 PPFIBP1Q86W92 1011 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 VPS37DQ86XT2 251 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 OR6P1Q8NGX9 317 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 SYTL5Q8TDW5 730 aaPredicted RBP6.71□□□□□ -1.33
PMS1-203ENST00000409593 SYTL4Q96C24 671 aaPredicted RBP6.71□□□□□ -1.33
PMS1-203ENST00000409593 ANAPC16Q96DE5 110 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 SHDQ96IW2 340 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 GFOD1Q9NXC2 390 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 TMEM59LQ9UK28 342 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 MINPP1Q9UNW1 487 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 CTNND2Q9UQB3 1225 aa6.71□□□□□ -1.33
PMS1-203ENST00000409593 ATF4P18848 351 aaPredicted RBP6.71□□□□□ -1.34
PMS1-203ENST00000409593 HK2P52789 917 aa6.71□□□□□ -1.34
PMS1-203ENST00000409593 AUHQ13825 339 aaKnown RBP6.71□□□□□ -1.34
PMS1-203ENST00000409593 TTC6Q86TZ1 520 aa6.71□□□□□ -1.34
PMS1-203ENST00000409593 FLAD1Q8NFF5 587 aa6.71□□□□□ -1.34
PMS1-203ENST00000409593 ENOX1Q8TC92 643 aaKnown RBP6.71□□□□□ -1.34
PMS1-203ENST00000409593 CCDC120Q96HB5 630 aa6.71□□□□□ -1.34
PMS1-203ENST00000409593 STRIP2Q9ULQ0 834 aa6.71□□□□□ -1.34
PMS1-203ENST00000409593 SSU72P8A0A1W2PR75 194 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 PAX4O43316 350 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 SIGLEC6O43699 453 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 SSBP05455 408 aaKnown RBP eCLIP6.7□□□□□ -1.34
PMS1-203ENST00000409593 DCAF15Q66K64 600 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 DAGLBQ8NCG7 672 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 ASIC4Q96FT7 647 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 TCTN2Q96GX1 697 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 DSCC1Q9BVC3 393 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 KRTAP4-9Q9BYQ8 210 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 FOXP3Q9BZS1 431 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 CHST7Q9NS84 486 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 SLC12A7Q9Y666 1083 aa6.7□□□□□ -1.34
PMS1-203ENST00000409593 GDNFP39905 211 aa6.69□□□□□ -1.34
PMS1-203ENST00000409593 BBS9Q3SYG4 887 aa6.69□□□□□ -1.34
PMS1-203ENST00000409593 C7orf61Q8IZ16 206 aa6.69□□□□□ -1.34
PMS1-203ENST00000409593 ZNF655Q8N720 491 aaPredicted RBP6.69□□□□□ -1.34
PMS1-203ENST00000409593 FAM168AQ92567 244 aa6.69□□□□□ -1.34
PMS1-203ENST00000409593 SMARCC1Q92922 1105 aaPredicted RBP6.69□□□□□ -1.34
PMS1-203ENST00000409593 ADAMTS10Q9H324 1103 aa6.69□□□□□ -1.34
PMS1-203ENST00000409593 C19orf73Q9NVV2 129 aa6.69□□□□□ -1.34
PMS1-203ENST00000409593 RNF114Q9Y508 228 aa6.69□□□□□ -1.34
PMS1-203ENST00000409593 MRVI1Q9Y6F6 885 aa6.69□□□□□ -1.34
PMS1-203ENST00000409593 LTBP3Q9NS15 1303 aa6.69□□□□□ -1.34
PMS1-203ENST00000409593 FKTNO75072 461 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 RAC2P15153 192 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 RPL10P27635 214 aaKnown RBP6.68□□□□□ -1.34
PMS1-203ENST00000409593 PCBP3P57721 371 aaKnown RBP6.68□□□□□ -1.34
PMS1-203ENST00000409593 AXDND1Q5T1B0 1012 aaPredicted RBP6.68□□□□□ -1.34
PMS1-203ENST00000409593 FAM169BQ8N8A8 192 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 C19orf47Q8N9M1 422 aaKnown RBP6.68□□□□□ -1.34
PMS1-203ENST00000409593 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.68□□□□□ -1.342e-8■□□□□ 9.3
PMS1-203ENST00000409593 TINF2Q9BSI4 451 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 TCFL5Q9UL49 500 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 PCDHB10Q9UN67 800 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 A0A1W2PQH9 124 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 SYPP08247 313 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 DNAJA1P31689 397 aaKnown RBP6.68□□□□□ -1.34
PMS1-203ENST00000409593 AFMP43652 599 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 TEKQ02763 1124 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 KCNMB1Q16558 191 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 GNPTABQ3T906 1256 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 NOL9Q5SY16 702 aaKnown RBP6.68□□□□□ -1.34
PMS1-203ENST00000409593 ZSWIM9Q86XI8 627 aa6.68□□□□□ -1.34
PMS1-203ENST00000409593 ZNF214Q9UL59 606 aaPredicted RBP6.68□□□□□ -1.34
PMS1-203ENST00000409593 SHOXO15266 292 aa6.67□□□□□ -1.34
PMS1-203ENST00000409593 ERVFC1P60507 584 aa6.67□□□□□ -1.34
PMS1-203ENST00000409593 FYB2Q5VWT5 728 aa6.67□□□□□ -1.34
PMS1-203ENST00000409593 CRTC3Q6UUV7 619 aa6.67□□□□□ -1.34
PMS1-203ENST00000409593 RNF111Q6ZNA4 994 aa6.67□□□□□ -1.34
PMS1-203ENST00000409593 WAPLQ7Z5K2 1190 aa6.67□□□□□ -1.34
PMS1-203ENST00000409593 USHBP1Q8N6Y0 703 aa6.67□□□□□ -1.34
PMS1-203ENST00000409593 DHX38Q92620 1227 aaKnown RBP6.67□□□□□ -1.34
PMS1-203ENST00000409593 KIRREL1Q96J84 757 aa6.67□□□□□ -1.34
PMS1-203ENST00000409593 PHAXQ9H814 394 aaKnown RBP6.67□□□□□ -1.34
PMS1-203ENST00000409593 IGSF5Q9NSI5 407 aa6.67□□□□□ -1.34
PMS1-203ENST00000409593 ZGLP1P0C6A0 271 aa6.66□□□□□ -1.34
PMS1-203ENST00000409593 ARID5AQ03989 594 aa6.66□□□□□ -1.34
PMS1-203ENST00000409593 BRF1Q92994 677 aa6.66□□□□□ -1.34
PMS1-203ENST00000409593 GP6Q9HCN6 339 aa6.66□□□□□ -1.34
PMS1-203ENST00000409593 ZMYM5Q9UJ78 669 aa6.66□□□□□ -1.34
PMS1-203ENST00000409593 SLC7A5Q01650 507 aa6.65□□□□□ -1.34
PMS1-203ENST00000409593 DUSP4Q13115 394 aa6.65□□□□□ -1.34
PMS1-203ENST00000409593 CARMIL2Q6F5E8 1435 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 ITGA4P13612 1032 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 CD247P20963 164 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 CTSKP43235 329 aa6.65□□□□□ -1.35
PMS1-203ENST00000409593 TCEAL1Q15170 157 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms