RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 STX1AQ16623 288 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 ADAT2Q7Z6V5 191 aaKnown RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 GDPD2Q9HCC8 539 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 AQRO60306 1485 aaKnown RBP eCLIP3.72□□□□□ -1.81
NEB-204ENST00000409198 MOCS3O95396 460 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 NPY2RP49146 381 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 HP1BP3Q5SSJ5 553 aaPredicted RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 TRIM42Q8IWZ5 723 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 CNKSR1Q969H4 720 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 SNTNA6NMZ2 147 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 MAP3K13O43283 966 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 GPC4O75487 556 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 GUCA1AP43080 201 aaPredicted RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 SEMA3FQ13275 785 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 CHMP1BQ7LBR1 199 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 MFSD1Q9H3U5 465 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 NDUFB5O43674 189 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 ALDH1A1P00352 501 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 AFMP43652 599 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 CLNS1AP54105 237 aaKnown RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 RAD51Q06609 339 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 CUL1Q13616 776 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 PBXIP1Q96AQ6 731 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 GTPBP6O43824 516 aaPredicted RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 CCT2P78371 535 aaKnown RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 FNBP4Q8N3X1 1017 aaPredicted RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 HELBQ8NG08 1087 aaPredicted RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 CACTINQ8WUQ7 758 aaKnown RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 COG4Q9H9E3 785 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 ADD3Q9UEY8 706 aaKnown RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 CUX1P39880 1505 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 SART1O43290 800 aaKnown RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 UFL1O94874 794 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 RINT1Q6NUQ1 792 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 APPL2Q8NEU8 664 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 FOPNLQ96NB1 174 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 PALMDQ9NP74 551 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 CCDC88BA6NC98 1476 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 FOXO3O43524 673 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 HSPA2P54652 639 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 TMC6Q7Z403 805 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 IFT20Q8IY31 132 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 FAM71BQ8TC56 605 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 P3H4Q92791 437 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 BNIP3LO60238 219 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 ACTN1P12814 892 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 MCM4P33991 863 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 CASP2P42575 452 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 VEPH1Q14D04 833 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 INAQ16352 499 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 CAMK4Q16566 473 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 CHAMP1Q96JM3 812 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 HPCAL4Q9UM19 191 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 CCDC61Q9Y6R9 512 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 SRRM1Q8IYB3 904 aaKnown RBP3.72□□□□□ -1.81
NEB-204ENST00000409198 RILPQ96NA2 401 aa3.72□□□□□ -1.81
NEB-204ENST00000409198 KRT86O43790 486 aa3.71□□□□□ -1.81
NEB-204ENST00000409198 JARID2Q92833 1246 aaPredicted RBP3.71□□□□□ -1.81
NEB-204ENST00000409198 PHF21AQ96BD5 680 aa3.71□□□□□ -1.81
NEB-204ENST00000409198 ZC4H2Q9NQZ6 224 aa3.71□□□□□ -1.81
NEB-204ENST00000409198 SYNDIG1LA6NDD5 238 aa3.71□□□□□ -1.81
NEB-204ENST00000409198 VAV2P52735 878 aa3.71□□□□□ -1.81
NEB-204ENST00000409198 TUBB4BP68371 445 aa3.71□□□□□ -1.81
NEB-204ENST00000409198 CCDC84Q86UT8 332 aaPredicted RBP3.71□□□□□ -1.81
NEB-204ENST00000409198 KLHL3Q9UH77 587 aa3.71□□□□□ -1.81
NEB-204ENST00000409198 NFU1Q9UMS0 254 aa3.71□□□□□ -1.81
NEB-204ENST00000409198 GTPBP10A4D1E9 387 aaKnown RBP3.71□□□□□ -1.81
NEB-204ENST00000409198 KRT8P05787 483 aa3.71□□□□□ -1.81
NEB-204ENST00000409198 ATP11AP98196 1134 aa3.71□□□□□ -1.81
NEB-204ENST00000409198 PAPOLBQ9NRJ5 636 aaKnown RBP3.71□□□□□ -1.81
NEB-204ENST00000409198 PTPRKQ15262 1439 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 LIG4P49917 911 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 PLCD1P51178 756 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 MED21Q13503 144 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 RAPGEF1Q13905 1077 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 KAZNQ674X7 775 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 RCSD1Q6JBY9 416 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 IQCA1LA6NCM1 817 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 TNNI1P19237 187 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 DSTYKQ6XUX3 929 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 ZSCAN30Q86W11 494 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 TSSK1BQ9BXA7 367 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 OSBPL10Q9BXB5 764 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 ECT2Q9H8V3 914 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 SCHIP1Q9P0W5 487 aaPredicted RBP3.71□□□□□ -1.82
NEB-204ENST00000409198 DAAM1Q9Y4D1 1078 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 CAPN7Q9Y6W3 813 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 ALDH1A2O94788 518 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 EVCP57679 992 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 PRPF40BQ6NWY9 871 aaKnown RBP3.71□□□□□ -1.82
NEB-204ENST00000409198 CCDC186Q7Z3E2 898 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 HAUS6Q7Z4H7 955 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 FBXL13Q8NEE6 735 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 HMG20BQ9P0W2 317 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 TTBK2Q6IQ55 1244 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 OOSP2Q86WS3 158 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 PDZD8Q8NEN9 1154 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 FAM129AQ9BZQ8 928 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 SMARCAD1Q9H4L7 1026 aa3.71□□□□□ -1.82
NEB-204ENST00000409198 ABI2Q9NYB9 513 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms