RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 GOLGA6L10A0A0M3HER8 536 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 KLF18A0A0U1RQI7 1052 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 GRID2IPA4D2P6 1211 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 E7EVH7 732 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 PDLIM1O00151 329 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 IFIT3O14879 490 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 N4BP3O15049 544 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TRAPPC3O43617 180 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 ACTN4O43707 911 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 BUB1BO60566 1050 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 USO1O60763 962 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TACC1O75410 805 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 SMNDC1O75940 238 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 DDX58O95786 925 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 HSPD1P10809 573 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 PDHBP11177 359 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 ALADP13716 330 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 FERP16591 822 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 MARCKSP29966 332 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 KRT9P35527 623 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 HSPA9P38646 679 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 PAFAH1B1P43034 410 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 SCTRP47872 440 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 FXR1P51114 621 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 RAB27AP51159 221 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 RPS6KA3P51812 740 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CCNG1P51959 295 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 COPB1P53618 953 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 HERVK_113P62684 666 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 ELF3P78545 371 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 HDLBPQ00341 1268 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TEFQ10587 303 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 IFT88Q13099 833 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 PAK2Q13177 524 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 ITGB3BPQ13352 177 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 MKRN4PQ13434 485 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 BIRC3Q13489 604 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TRIM29Q14134 588 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 PDIA5Q14554 519 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 ITIH4Q14624 930 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 SEPT2Q15019 361 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 MEA1Q16626 185 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 PTPN21Q16825 1174 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 IMMTQ16891 758 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TNNI3KQ59H18 835 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 RILPL1Q5EBL4 403 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CMPK2Q5EBM0 449 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 AGBL2Q5U5Z8 902 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 MSL1Q68DK7 614 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TTC19Q6DKK2 380 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 OTUD7BQ6GQQ9 843 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CAPRIN2Q6IMN6 1127 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 MIS18BP1Q6P0N0 1132 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 RUFY4Q6ZNE9 571 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CCDC129Q6ZRS4 1044 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 BZW1Q7L1Q6 419 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CACNA2D4Q7Z3S7 1137 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 SH3RF1Q7Z6J0 888 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 VPS37DQ86XT2 251 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 MB21D2Q8IYB1 491 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TRMT44Q8IYL2 757 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CACNA2D3Q8IZS8 1091 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 DRAXINQ8NBI3 349 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TSEN2Q8NCE0 465 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 NCOA7Q8NI08 942 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 ZFAND2BQ8WV99 257 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 LMBR1Q8WVP7 490 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 WASF1Q92558 559 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 NECTIN2Q92692 538 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CNKSR1Q969H4 720 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 AIDAQ96BJ3 306 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CENPTQ96BT3 561 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 SPDL1Q96EA4 605 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 DTNBP1Q96EV8 351 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 ACSBG1Q96GR2 724 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 SUCLG2Q96I99 432 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CALR3Q96L12 384 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 SPAG5Q96R06 1193 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 NUP88Q99567 741 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 SLF1Q9BQI6 1058 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 PLCD4Q9BRC7 762 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 ALG1Q9BT22 464 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 OSBPL7Q9BZF2 842 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 KIF9Q9HAQ2 790 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TMBIM4Q9HC24 238 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 NOD2Q9HC29 1040 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 NCOA5Q9HCD5 579 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 GPR108Q9NPR9 543 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 HAUS2Q9NVX0 235 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TLR7Q9NYK1 1049 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 NOP53Q9NZM5 478 aaKnown RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 STIM2Q9P246 746 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CHPF2Q9P2E5 772 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 SWAP70Q9UH65 585 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 RWDD2AQ9UIY3 292 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 TSKSQ9UJT2 592 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 FBXO2Q9UK22 296 aaPredicted RBP3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 CAPN11Q9UMQ6 739 aa3.44□□□□□ -1.86
RNU6ATAC40P-201ENST00000408580 SNX12Q9UMY4 172 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms