RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 RAI14Q9P0K7 980 aa17.36■□□□□ 0.37
LIMK2-204ENST00000406516 hCG_1642624A0A1W2PR95 340 aa17.35■□□□□ 0.37
LIMK2-204ENST00000406516 FAM205CA6NFA0 338 aa17.35■□□□□ 0.37
LIMK2-204ENST00000406516 IGSF3O75054 1194 aa17.35■□□□□ 0.37
LIMK2-204ENST00000406516 CDK11BP21127 795 aaKnown RBP17.35■□□□□ 0.37
LIMK2-204ENST00000406516 CSRNP2Q9H175 543 aa17.35■□□□□ 0.37
LIMK2-204ENST00000406516 TMX1Q9H3N1 280 aa17.35■□□□□ 0.37
LIMK2-204ENST00000406516 CCP110O43303 1012 aa17.35■□□□□ 0.37
LIMK2-204ENST00000406516 MYO1BO43795 1136 aa17.35■□□□□ 0.37
LIMK2-204ENST00000406516 IL1R1P14778 569 aa17.35■□□□□ 0.37
LIMK2-204ENST00000406516 VPS54Q9P1Q0 977 aa17.35■□□□□ 0.37
LIMK2-204ENST00000406516 ZNRF3Q9ULT6 936 aa17.35■□□□□ 0.37
LIMK2-204ENST00000406516 RAD17O75943 681 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 AKAP17AQ02040 695 aaKnown RBP17.34■□□□□ 0.37
LIMK2-204ENST00000406516 PODNQ7Z5L7 613 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 ELOA2Q8IYF1 753 aaPredicted RBP17.34■□□□□ 0.37
LIMK2-204ENST00000406516 SHISA4Q96DD7 197 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 GTPBP4Q9BZE4 634 aaKnown RBP17.34■□□□□ 0.37
LIMK2-204ENST00000406516 SRPRBQ9Y5M8 271 aaKnown RBP17.34■□□□□ 0.37
LIMK2-204ENST00000406516 MAGEB6P1A0A0J9YX57 407 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 ESR2Q92731 530 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 CEP131Q9UPN4 1083 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.34■□□□□ 0.37
LIMK2-204ENST00000406516 CYP2D7A0A087X1C5 515 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 FZD9O00144 591 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 ACTN4O43707 911 aaKnown RBP17.34■□□□□ 0.37
LIMK2-204ENST00000406516 PRDM1O75626 825 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 CXCL9Q07325 125 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 MORC3Q14149 939 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 SEC23AQ15436 765 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 FAM177A1Q8N128 213 aaPredicted RBP17.34■□□□□ 0.37
LIMK2-204ENST00000406516 MLKLQ8NB16 471 aa17.34■□□□□ 0.37
LIMK2-204ENST00000406516 SARSP49591 514 aaKnown RBP17.33■□□□□ 0.36
LIMK2-204ENST00000406516 GTF2IP78347 998 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 NT5DC1Q5TFE4 455 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 TRIM65Q6PJ69 517 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 REXO1L1PQ8IX06 675 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 ZNF579Q8NAF0 562 aaKnown RBP17.33■□□□□ 0.36
LIMK2-204ENST00000406516 DACH1Q9UI36 760 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 MORC2Q9Y6X9 1032 aaPredicted RBP17.33■□□□□ 0.36
LIMK2-204ENST00000406516 SBF1O95248 1867 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 TUBB4AP04350 444 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 TMEM139Q8IV31 216 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.36
LIMK2-204ENST00000406516 DHX58Q96C10 678 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 MTA3Q9BTC8 594 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 MXD3Q9BW11 206 aa17.33■□□□□ 0.36
LIMK2-204ENST00000406516 RNF26Q9BY78 433 aaPredicted RBP17.33■□□□□ 0.36
LIMK2-204ENST00000406516 PHLPP2Q6ZVD8 1323 aa17.32■□□□□ 0.36
LIMK2-204ENST00000406516 FANCGO15287 622 aa17.32■□□□□ 0.36
LIMK2-204ENST00000406516 ZNF18P17022 549 aa17.32■□□□□ 0.36
LIMK2-204ENST00000406516 ADKP55263 362 aaKnown RBP17.32■□□□□ 0.36
LIMK2-204ENST00000406516 EARS2Q5JPH6 523 aaKnown RBP17.32■□□□□ 0.36
LIMK2-204ENST00000406516 SAMSN1Q9NSI8 373 aaKnown RBP17.32■□□□□ 0.36
LIMK2-204ENST00000406516 CCDC88AQ3V6T2 1871 aa17.32■□□□□ 0.36
LIMK2-204ENST00000406516 ZNF541Q9H0D2 1346 aa17.32■□□□□ 0.36
LIMK2-204ENST00000406516 TRIM75PA6NK02 468 aa17.32■□□□□ 0.36
LIMK2-204ENST00000406516 ARHGAP6O43182 974 aa17.32■□□□□ 0.36
LIMK2-204ENST00000406516 RCAN1P53805 252 aa17.32■□□□□ 0.36
LIMK2-204ENST00000406516 DYNLL1P63167 89 aaKnown RBP17.32■□□□□ 0.36
LIMK2-204ENST00000406516 ENOX1Q8TC92 643 aaKnown RBP17.32■□□□□ 0.36
LIMK2-204ENST00000406516 MED15Q96RN5 788 aa17.32■□□□□ 0.36
LIMK2-204ENST00000406516 BAG1Q99933 345 aaPredicted RBP17.32■□□□□ 0.36
LIMK2-204ENST00000406516 PPP2R2CQ9Y2T4 447 aa17.32■□□□□ 0.36
LIMK2-204ENST00000406516 PLEKHA8P1O95397 391 aa17.31■□□□□ 0.36
LIMK2-204ENST00000406516 TBX2Q13207 712 aaPredicted RBP17.31■□□□□ 0.36
LIMK2-204ENST00000406516 SPECC1LQ69YQ0 1117 aa17.31■□□□□ 0.36
LIMK2-204ENST00000406516 EPSTI1Q96J88 318 aa17.31■□□□□ 0.36
LIMK2-204ENST00000406516 ZSCAN10Q96SZ4 725 aaPredicted RBP17.31■□□□□ 0.36
LIMK2-204ENST00000406516 GNL3LQ9NVN8 582 aaKnown RBP17.31■□□□□ 0.36
LIMK2-204ENST00000406516 A0A087X0B3 334 aa17.31■□□□□ 0.36
LIMK2-204ENST00000406516 ZSCAN12O43309 604 aa17.31■□□□□ 0.36
LIMK2-204ENST00000406516 URI1O94763 535 aaPredicted RBP17.31■□□□□ 0.36
LIMK2-204ENST00000406516 XBP1P17861 261 aa17.31■□□□□ 0.36
LIMK2-204ENST00000406516 AFMP43652 599 aa17.31■□□□□ 0.36
LIMK2-204ENST00000406516 PKN1Q16512 942 aa17.31■□□□□ 0.36
LIMK2-204ENST00000406516 PSMD14O00487 310 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 CASP1P29466 404 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 KRT2P35908 639 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 IFIT1BQ5T764 474 aaKnown RBP17.3■□□□□ 0.36
LIMK2-204ENST00000406516 KANK3Q6NY19 840 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 TRIML1Q8N9V2 468 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 RIOK1Q9BRS2 568 aaKnown RBP17.3■□□□□ 0.36
LIMK2-204ENST00000406516 ZNF446Q9NWS9 450 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 V9GY48 417 aaPredicted RBP17.3■□□□□ 0.36
LIMK2-204ENST00000406516 COL1A1P02452 1464 aaPredicted RBP17.3■□□□□ 0.36
LIMK2-204ENST00000406516 VWA3AA6NCI4 1184 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 USP17L3A6NCW0 530 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 USP17L4A6NCW7 530 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 PLCD1P51178 756 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 ARHGAP29Q52LW3 1261 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 KLHL10Q6JEL2 608 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 USP17L1Q7RTZ2 530 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 FCHSD1Q86WN1 690 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 KRT222Q8N1A0 295 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 TC2NQ8N9U0 490 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 ZBTB12Q9Y330 459 aaPredicted RBP17.3■□□□□ 0.36
LIMK2-204ENST00000406516 MYH6P13533 1939 aa17.3■□□□□ 0.36
LIMK2-204ENST00000406516 WNT7AO00755 349 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms