RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 SLC25A27O95847 323 aa17.58■□□□□ 0.4
VAMP1-203ENST00000400911 PGK1P00558 417 aa17.58■□□□□ 0.4
VAMP1-203ENST00000400911 RARBP10826 455 aa17.58■□□□□ 0.4
VAMP1-203ENST00000400911 TAL1P17542 331 aaPredicted RBP17.58■□□□□ 0.4
VAMP1-203ENST00000400911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.58■□□□□ 0.4
VAMP1-203ENST00000400911 MMP19Q99542 508 aa17.58■□□□□ 0.4
VAMP1-203ENST00000400911 FBXO28Q9NVF7 368 aa17.58■□□□□ 0.4
VAMP1-203ENST00000400911 PHF24Q9UPV7 400 aa17.58■□□□□ 0.4
VAMP1-203ENST00000400911 MBD4O95243 580 aa17.57■□□□□ 0.4
VAMP1-203ENST00000400911 IFIT2P09913 472 aaKnown RBP17.57■□□□□ 0.4
VAMP1-203ENST00000400911 CDK8P49336 464 aa17.57■□□□□ 0.4
VAMP1-203ENST00000400911 EPHB4P54760 987 aa17.57■□□□□ 0.4
VAMP1-203ENST00000400911 RNF180Q86T96 592 aa17.57■□□□□ 0.4
VAMP1-203ENST00000400911 CLASRPQ8N2M8 674 aaKnown RBP17.57■□□□□ 0.4
VAMP1-203ENST00000400911 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
VAMP1-203ENST00000400911 TINF2Q9BSI4 451 aa17.57■□□□□ 0.4
VAMP1-203ENST00000400911 ATP8A2Q9NTI2 1148 aa17.57■□□□□ 0.4
VAMP1-203ENST00000400911 NRBP1Q9UHY1 535 aa17.57■□□□□ 0.4
VAMP1-203ENST00000400911 ADAMTS5Q9UNA0 930 aa17.57■□□□□ 0.4
VAMP1-203ENST00000400911 MYO5AQ9Y4I1 1855 aaKnown RBP17.56■□□□□ 0.4
VAMP1-203ENST00000400911 PQBP1O60828 265 aaKnown RBP17.56■□□□□ 0.4
VAMP1-203ENST00000400911 CLTBP09497 229 aa17.56■□□□□ 0.4
VAMP1-203ENST00000400911 EEF2P13639 858 aaKnown RBP17.56■□□□□ 0.4
VAMP1-203ENST00000400911 ZNF792Q3KQV3 632 aa17.56■□□□□ 0.4
VAMP1-203ENST00000400911 C12orf60Q5U649 245 aa17.56■□□□□ 0.4
VAMP1-203ENST00000400911 RIOX2Q8IUF8 465 aa17.56■□□□□ 0.4
VAMP1-203ENST00000400911 KIF1BPQ96EK5 621 aa17.56■□□□□ 0.4
VAMP1-203ENST00000400911 CCDC17Q96LX7 622 aa17.56■□□□□ 0.4
VAMP1-203ENST00000400911 A0A1W2PQ45 241 aaPredicted RBP17.55■□□□□ 0.4
VAMP1-203ENST00000400911 A0A1W2PQY0 241 aa17.55■□□□□ 0.4
VAMP1-203ENST00000400911 USP17L12C9JPN9 530 aa17.55■□□□□ 0.4
VAMP1-203ENST00000400911 USP17L21D6R901 530 aa17.55■□□□□ 0.4
VAMP1-203ENST00000400911 VWA5AO00534 786 aa17.55■□□□□ 0.4
VAMP1-203ENST00000400911 RAD21O60216 631 aa17.55■□□□□ 0.4
VAMP1-203ENST00000400911 CHGBP05060 677 aa17.55■□□□□ 0.4
VAMP1-203ENST00000400911 ZNF865P0CJ78 1059 aaPredicted RBP17.55■□□□□ 0.4
VAMP1-203ENST00000400911 STAT3P40763 770 aa17.55■□□□□ 0.4
VAMP1-203ENST00000400911 KCTD2Q14681 263 aa17.55■□□□□ 0.4
VAMP1-203ENST00000400911 LENG1Q96BZ8 264 aaPredicted RBP17.55■□□□□ 0.4
VAMP1-203ENST00000400911 RNPC3Q96LT9 517 aaKnown RBP17.55■□□□□ 0.4
VAMP1-203ENST00000400911 PAG1Q9NWQ8 432 aa17.55■□□□□ 0.4
VAMP1-203ENST00000400911 DIS3Q9Y2L1 958 aaKnown RBP17.55■□□□□ 0.4
VAMP1-203ENST00000400911 MYH1P12882 1939 aa17.55■□□□□ 0.4
VAMP1-203ENST00000400911 KIAA0355O15063 1070 aa17.54■□□□□ 0.4
VAMP1-203ENST00000400911 FOSL2P15408 326 aa17.54■□□□□ 0.4
VAMP1-203ENST00000400911 RAG1P15918 1043 aa17.54■□□□□ 0.4
VAMP1-203ENST00000400911 ADD2P35612 726 aa17.54■□□□□ 0.4
VAMP1-203ENST00000400911 C16orf86Q6ZW13 317 aa17.54■□□□□ 0.4
VAMP1-203ENST00000400911 BOLA2Q9H3K6 86 aa17.54■□□□□ 0.4
VAMP1-203ENST00000400911 KANSL2Q9H9L4 492 aa17.54■□□□□ 0.4
VAMP1-203ENST00000400911 TMEM39AQ9NV64 488 aa17.54■□□□□ 0.4
VAMP1-203ENST00000400911 PPP1R9AQ9ULJ8 1098 aa17.54■□□□□ 0.4
VAMP1-203ENST00000400911 MUC3AQ02505 3323 aa17.53■□□□□ 0.4
VAMP1-203ENST00000400911 FAM83BQ5T0W9 1011 aa17.53■□□□□ 0.4
VAMP1-203ENST00000400911 AMOTL1Q8IY63 956 aa17.53■□□□□ 0.4
VAMP1-203ENST00000400911 ZNF214Q9UL59 606 aaPredicted RBP17.53■□□□□ 0.4
VAMP1-203ENST00000400911 FRMPD3Q5JV73 1810 aa17.52■□□□□ 0.4
VAMP1-203ENST00000400911 AKR1A1P14550 325 aa17.52■□□□□ 0.4
VAMP1-203ENST00000400911 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.4
VAMP1-203ENST00000400911 FPGSQ05932 587 aa17.52■□□□□ 0.4
VAMP1-203ENST00000400911 FAAP100Q0VG06 881 aa17.52■□□□□ 0.4
VAMP1-203ENST00000400911 SIRT2Q8IXJ6 389 aa17.52■□□□□ 0.4
VAMP1-203ENST00000400911 REPS2Q8NFH8 660 aa17.52■□□□□ 0.4
VAMP1-203ENST00000400911 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.4
VAMP1-203ENST00000400911 GOPCQ9HD26 462 aa17.52■□□□□ 0.4
VAMP1-203ENST00000400911 CNPY2Q9Y2B0 182 aa17.52■□□□□ 0.4
VAMP1-203ENST00000400911 ZNF236Q9UL36 1845 aa17.51■□□□□ 0.39
VAMP1-203ENST00000400911 ADAMTS4O75173 837 aa17.51■□□□□ 0.39
VAMP1-203ENST00000400911 ATP5JP18859 108 aa17.51■□□□□ 0.39
VAMP1-203ENST00000400911 ACLYP53396 1101 aa17.51■□□□□ 0.39
VAMP1-203ENST00000400911 GRIN2CQ14957 1233 aa17.51■□□□□ 0.39
VAMP1-203ENST00000400911 CTR9Q6PD62 1173 aa17.51■□□□□ 0.39
VAMP1-203ENST00000400911 ANKRD33Q7Z3H0 272 aa17.51■□□□□ 0.39
VAMP1-203ENST00000400911 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
VAMP1-203ENST00000400911 NUP88Q99567 741 aaPredicted RBP17.51■□□□□ 0.39
VAMP1-203ENST00000400911 TSEN34Q9BSV6 310 aaKnown RBP17.51■□□□□ 0.39
VAMP1-203ENST00000400911 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.51■□□□□ 0.39
VAMP1-203ENST00000400911 SLC4A4Q9Y6R1 1079 aa17.51■□□□□ 0.39
VAMP1-203ENST00000400911 LTBP2Q14767 1821 aa17.5■□□□□ 0.39
VAMP1-203ENST00000400911 TMEM265A0A087WTH1 108 aa17.5■□□□□ 0.39
VAMP1-203ENST00000400911 DCDC2CA8MYV0 355 aa17.5■□□□□ 0.39
VAMP1-203ENST00000400911 COPB2P35606 906 aa17.5■□□□□ 0.39
VAMP1-203ENST00000400911 KCNA10Q16322 511 aa17.5■□□□□ 0.39
VAMP1-203ENST00000400911 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
VAMP1-203ENST00000400911 NUP133Q8WUM0 1156 aa17.5■□□□□ 0.39
VAMP1-203ENST00000400911 TOX2Q96NM4 488 aa17.5■□□□□ 0.39
VAMP1-203ENST00000400911 HAUS7Q99871 368 aa17.5■□□□□ 0.39
VAMP1-203ENST00000400911 STARD7Q9NQZ5 370 aa17.5■□□□□ 0.39
VAMP1-203ENST00000400911 SYNRGQ9UMZ2 1314 aa17.49■□□□□ 0.39
VAMP1-203ENST00000400911 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.49■□□□□ 0.39
VAMP1-203ENST00000400911 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.49■□□□□ 0.39
VAMP1-203ENST00000400911 RAB11FIP3O75154 756 aa17.49■□□□□ 0.39
VAMP1-203ENST00000400911 HMMRO75330 724 aa17.49■□□□□ 0.39
VAMP1-203ENST00000400911 SNAI1O95863 264 aaPredicted RBP17.49■□□□□ 0.39
VAMP1-203ENST00000400911 UBE3CQ15386 1083 aa17.49■□□□□ 0.39
VAMP1-203ENST00000400911 KLHDC9Q8NEP7 349 aa17.49■□□□□ 0.39
VAMP1-203ENST00000400911 DDX11Q96FC9 970 aa17.49■□□□□ 0.39
VAMP1-203ENST00000400911 SLF1Q9BQI6 1058 aa17.49■□□□□ 0.39
VAMP1-203ENST00000400911 PUS7LQ9H0K6 701 aaKnown RBP17.49■□□□□ 0.39
VAMP1-203ENST00000400911 FAM184BQ9ULE4 1060 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms