RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 TMEM106CQ9BVX2 250 aa18.36■□□□□ 0.53
ATG4B-202ENST00000400771 MOV10L1Q9BXT6 1211 aaKnown RBP18.36■□□□□ 0.53
ATG4B-202ENST00000400771 IL17RBQ9NRM6 502 aa18.36■□□□□ 0.53
ATG4B-202ENST00000400771 SYNPO2Q9UMS6 1093 aa18.36■□□□□ 0.53
ATG4B-202ENST00000400771 HMGCRP04035 888 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 TSPY3P0CV98 308 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 TSPY8P0CW00 308 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 NOVP48745 357 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 TFAP4Q01664 338 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 GRB14Q14449 540 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 CWC27Q6UX04 472 aaKnown RBP18.35■□□□□ 0.53
ATG4B-202ENST00000400771 RASGRP2Q7LDG7 609 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 ZNF444Q8N0Y2 327 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-202ENST00000400771 MB21D1Q8N884 522 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 APBA2Q99767 749 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 NUDT12Q9BQG2 462 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 SPATC1LQ9H0A9 340 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 PAK6Q9NQU5 681 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-202ENST00000400771 DIAPH3Q9NSV4 1193 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 PPP1R9AQ9ULJ8 1098 aa18.35■□□□□ 0.53
ATG4B-202ENST00000400771 MYH6P13533 1939 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 F5H6K3 240 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 NMT2O60551 498 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 TTLL1O95922 423 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 IGHA2P01877 340 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 GJB1P08034 283 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 SLC3A2P08195 630 aaKnown RBP18.34■□□□□ 0.53
ATG4B-202ENST00000400771 XRCC5P13010 732 aaKnown RBP18.34■□□□□ 0.53
ATG4B-202ENST00000400771 UBXN2AP68543 259 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 CCNA1P78396 465 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 KLRC3Q07444 240 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 TMEM132BQ14DG7 1078 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 CCL14Q16627 93 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 MAP3K21Q5TCX8 1036 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 GMCL1P1Q8NEA9 526 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 SHCBP1Q8NEM2 672 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 HOXC10Q9NYD6 342 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
ATG4B-202ENST00000400771 ZNF214Q9UL59 606 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-202ENST00000400771 NEDD4P46934 1319 aa18.33■□□□□ 0.53
ATG4B-202ENST00000400771 CYP2B6P20813 491 aa18.33■□□□□ 0.52
ATG4B-202ENST00000400771 PTPREP23469 700 aa18.33■□□□□ 0.52
ATG4B-202ENST00000400771 GJA8P48165 433 aa18.33■□□□□ 0.52
ATG4B-202ENST00000400771 HAND2P61296 217 aa18.33■□□□□ 0.52
ATG4B-202ENST00000400771 UBE2Q1Q7Z7E8 422 aa18.33■□□□□ 0.52
ATG4B-202ENST00000400771 RNF208Q9H0X6 261 aa18.33■□□□□ 0.52
ATG4B-202ENST00000400771 SLC15A5A6NIM6 579 aa18.32■□□□□ 0.52
ATG4B-202ENST00000400771 HIP1O00291 1037 aa18.32■□□□□ 0.52
ATG4B-202ENST00000400771 VWA5AO00534 786 aa18.32■□□□□ 0.52
ATG4B-202ENST00000400771 HOXC6P09630 235 aa18.32■□□□□ 0.52
ATG4B-202ENST00000400771 ERCC3P19447 782 aa18.32■□□□□ 0.52
ATG4B-202ENST00000400771 RGS2P41220 211 aa18.32■□□□□ 0.52
ATG4B-202ENST00000400771 MAP2K5Q13163 448 aa18.32■□□□□ 0.52
ATG4B-202ENST00000400771 STAG1Q8WVM7 1258 aa18.32■□□□□ 0.52
ATG4B-202ENST00000400771 FLRT1Q9NZU1 646 aa18.32■□□□□ 0.52
ATG4B-202ENST00000400771 BIN2Q9UBW5 565 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-202ENST00000400771 RAD50Q92878 1312 aa18.31■□□□□ 0.52
ATG4B-202ENST00000400771 TSPY2A6NKD2 308 aa18.31■□□□□ 0.52
ATG4B-202ENST00000400771 RAD21O60216 631 aa18.31■□□□□ 0.52
ATG4B-202ENST00000400771 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
ATG4B-202ENST00000400771 U2AF1L4Q8WU68 220 aaKnown RBP18.31■□□□□ 0.52
ATG4B-202ENST00000400771 SLF1Q9BQI6 1058 aa18.31■□□□□ 0.52
ATG4B-202ENST00000400771 DSCC1Q9BVC3 393 aa18.31■□□□□ 0.52
ATG4B-202ENST00000400771 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.31■□□□□ 0.529e-8■■■□□ 15.9
ATG4B-202ENST00000400771 ZKSCAN1P17029 563 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-202ENST00000400771 SAMD1Q6SPF0 538 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-202ENST00000400771 SKAP1Q86WV1 359 aa18.3■□□□□ 0.52
ATG4B-202ENST00000400771 NPLOC4Q8TAT6 608 aa18.3■□□□□ 0.52
ATG4B-202ENST00000400771 CRISPLD2Q9H0B8 497 aa18.3■□□□□ 0.52
ATG4B-202ENST00000400771 RANBP6O60518 1105 aaKnown RBP18.29■□□□□ 0.52
ATG4B-202ENST00000400771 PRKAR2AP13861 404 aaKnown RBP18.29■□□□□ 0.52
ATG4B-202ENST00000400771 AKNAD1Q5T1N1 836 aa18.29■□□□□ 0.52
ATG4B-202ENST00000400771 WDR78Q5VTH9 848 aa18.29■□□□□ 0.52
ATG4B-202ENST00000400771 RIOX2Q8IUF8 465 aa18.29■□□□□ 0.52
ATG4B-202ENST00000400771 GMCL1Q96IK5 515 aa18.29■□□□□ 0.52
ATG4B-202ENST00000400771 SGPL1O95470 568 aa18.28■□□□□ 0.52
ATG4B-202ENST00000400771 CHMLP26374 656 aa18.28■□□□□ 0.52
ATG4B-202ENST00000400771 ADORA2AP29274 412 aa18.28■□□□□ 0.52
ATG4B-202ENST00000400771 CACNB2Q08289 660 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-202ENST00000400771 PLS1Q14651 629 aa18.28■□□□□ 0.52
ATG4B-202ENST00000400771 SLFN13Q68D06 897 aa18.28■□□□□ 0.52
ATG4B-202ENST00000400771 RCSD1Q6JBY9 416 aa18.28■□□□□ 0.52
ATG4B-202ENST00000400771 CCAR1Q8IX12 1150 aaKnown RBP18.28■□□□□ 0.52
ATG4B-202ENST00000400771 DEFB118Q96PH6 123 aa18.28■□□□□ 0.52
ATG4B-202ENST00000400771 STX8Q9UNK0 236 aa18.28■□□□□ 0.52
ATG4B-202ENST00000400771 RPTORQ8N122 1335 aa18.27■□□□□ 0.52
ATG4B-202ENST00000400771 ATP2A1O14983 1001 aa18.27■□□□□ 0.52
ATG4B-202ENST00000400771 COBLO75128 1261 aa18.27■□□□□ 0.52
ATG4B-202ENST00000400771 PCP11498 1178 aaKnown RBP18.27■□□□□ 0.52
ATG4B-202ENST00000400771 RRP12Q5JTH9 1297 aaKnown RBP18.27■□□□□ 0.52
ATG4B-202ENST00000400771 TRMT44Q8IYL2 757 aaKnown RBP18.27■□□□□ 0.52
ATG4B-202ENST00000400771 MROH8Q9H579 483 aa18.27■□□□□ 0.52
ATG4B-202ENST00000400771 SLC38A10Q9HBR0 1119 aa18.27■□□□□ 0.52
ATG4B-202ENST00000400771 CWC22Q9HCG8 908 aaKnown RBP18.27■□□□□ 0.52
ATG4B-202ENST00000400771 TCP11L1Q9NUJ3 509 aa18.27■□□□□ 0.52
ATG4B-202ENST00000400771 IVNS1ABPQ9Y6Y0 642 aa18.27■□□□□ 0.52
ATG4B-202ENST00000400771 SLC25A27O95847 323 aa18.26■□□□□ 0.51
ATG4B-202ENST00000400771 BMP3P12645 472 aa18.26■□□□□ 0.51
ATG4B-202ENST00000400771 CCND3P30281 292 aaPredicted RBP18.26■□□□□ 0.51
ATG4B-202ENST00000400771 MNX1P50219 401 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms