RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 COPS6Q7L5N1 327 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 NLRP14Q86W24 1093 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 FCHSD1Q86WN1 690 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 CCDC155Q8N6L0 562 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 ANKRD42Q8N9B4 389 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 CCDC197Q8NCU1 140 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 EPB41L5Q9HCM4 733 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 HMGB1P09429 215 aaKnown RBP15.26■□□□□ 0.03
RUNX3-203ENST00000399916 FAM47EQ6ZV65 393 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 GNAT1P11488 350 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 VPS41P49754 854 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 TMCO4Q5TGY1 634 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 XAGE3Q8WTP9 111 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 CCT8L2Q96SF2 557 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 ZNF711Q9Y462 761 aa15.26■□□□□ 0.03
RUNX3-203ENST00000399916 A0A087WZG4 1122 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 TPD52L2O43399 206 aaKnown RBP15.25■□□□□ 0.03
RUNX3-203ENST00000399916 ZBTB16Q05516 673 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 HHATQ5VTY9 493 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 DDX17Q92841 729 aaKnown RBP15.25■□□□□ 0.03
RUNX3-203ENST00000399916 RMI1Q9H9A7 625 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 SLAIN2Q9P270 581 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 EPN1Q9Y6I3 576 aaPredicted RBP15.25■□□□□ 0.03
RUNX3-203ENST00000399916 PFKFB2O60825 505 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 LMBR1Q8WVP7 490 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 PRDM11Q9NQV5 511 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 PICK1Q9NRD5 415 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 NLRP2Q9NX02 1062 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 L3MBTL1Q9Y468 752 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 A0A1W2PRG0 241 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 HNRNPCP07910 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
RUNX3-203ENST00000399916 APBA1Q02410 837 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 RUFY4Q6ZNE9 571 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 SNRNP27Q8WVK2 155 aaKnown RBP15.25■□□□□ 0.03
RUNX3-203ENST00000399916 STMN2Q93045 179 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 NFU1Q9UMS0 254 aa15.25■□□□□ 0.03
RUNX3-203ENST00000399916 OPHN1O60890 802 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 ZNF131P52739 623 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 TIMM10P62072 90 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 ADCY1Q08828 1119 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 SETDB1Q15047 1291 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 SMYD4Q8IYR2 804 aaPredicted RBP15.24■□□□□ 0.03
RUNX3-203ENST00000399916 GRAMD1CQ8IYS0 662 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 PLIN2Q99541 437 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 TRIM7Q9C029 511 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 HDLBPQ00341 1268 aaKnown RBP15.24■□□□□ 0.03
RUNX3-203ENST00000399916 MYBL2P10244 700 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 CUL3Q13618 768 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 ZNF473Q8WTR7 871 aaKnown RBP15.24■□□□□ 0.03
RUNX3-203ENST00000399916 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 ELAC2Q9BQ52 826 aaKnown RBP15.24■□□□□ 0.03
RUNX3-203ENST00000399916 GJB4Q9NTQ9 266 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 NOVA2Q9UNW9 492 aaKnown RBP15.24■□□□□ 0.03
RUNX3-203ENST00000399916 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.24■□□□□ 0.03
RUNX3-203ENST00000399916 BUB1O43683 1085 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 CYP27A1Q02318 531 aa15.24■□□□□ 0.03
RUNX3-203ENST00000399916 A1BGP04217 495 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 AMOTL1Q8IY63 956 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 ERFP50548 548 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 METAP2P50579 478 aaKnown RBP eCLIP15.23■□□□□ 0.03
RUNX3-203ENST00000399916 USP4Q13107 963 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 STAMBPL1Q96FJ0 436 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 PAPOLBQ9NRJ5 636 aaKnown RBP15.23■□□□□ 0.03
RUNX3-203ENST00000399916 HPCAL4Q9UM19 191 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 CEP131Q9UPN4 1083 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 GOLGA8AA7E2F4 631 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 IFIT1P09914 478 aaKnown RBP15.23■□□□□ 0.03
RUNX3-203ENST00000399916 TPP2P29144 1249 aaPredicted RBP15.23■□□□□ 0.03
RUNX3-203ENST00000399916 DEUP1Q05D60 604 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 SEPT6Q14141 434 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 NBPF9Q3BBW0 867 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 MYSM1Q5VVJ2 828 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 NSUN7Q8NE18 718 aaKnown RBP15.23■□□□□ 0.03
RUNX3-203ENST00000399916 DDX23Q9BUQ8 820 aaKnown RBP15.23■□□□□ 0.03
RUNX3-203ENST00000399916 SH3BP1Q9Y3L3 701 aa15.23■□□□□ 0.03
RUNX3-203ENST00000399916 KIF20BQ96Q89 1820 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 KRT13P13646 458 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 CTCFP49711 727 aaPredicted RBP15.22■□□□□ 0.03
RUNX3-203ENST00000399916 MAP7D1Q3KQU3 841 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 OSBPL9Q96SU4 736 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 SERTAD1Q9UHV2 236 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 DBNLQ9UJU6 430 aaKnown RBP15.22■□□□□ 0.03
RUNX3-203ENST00000399916 RCOR1Q9UKL0 485 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 USP6P35125 1406 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 SYNRGQ9UMZ2 1314 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 KIAA0753Q2KHM9 967 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 RAPGEF4Q8WZA2 1011 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 MRRFQ96E11 262 aaKnown RBP15.22■□□□□ 0.03
RUNX3-203ENST00000399916 TBC1D8BQ0IIM8 1120 aa15.22■□□□□ 0.03
RUNX3-203ENST00000399916 GPHNQ9NQX3 736 aaPredicted RBP15.22■□□□□ 0.03
RUNX3-203ENST00000399916 ADAMTS2O95450 1211 aa15.21■□□□□ 0.03
RUNX3-203ENST00000399916 DESP17661 470 aa15.21■□□□□ 0.03
RUNX3-203ENST00000399916 IGHMBP2P38935 993 aaKnown RBP15.21■□□□□ 0.03
RUNX3-203ENST00000399916 PPARAQ07869 468 aa15.21■□□□□ 0.03
RUNX3-203ENST00000399916 POSTNQ15063 836 aa15.21■□□□□ 0.03
RUNX3-203ENST00000399916 TNNI3KQ59H18 835 aa15.21■□□□□ 0.03
RUNX3-203ENST00000399916 LMBR1LQ6UX01 489 aa15.21■□□□□ 0.03
RUNX3-203ENST00000399916 TCHPQ9BT92 498 aa15.21■□□□□ 0.03
RUNX3-203ENST00000399916 DPH5Q9H2P9 285 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms