RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 TFRCP02786 760 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 NMIQ13287 307 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 RILPL1Q5EBL4 403 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 ZC4H2Q9NQZ6 224 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 HESX1Q9UBX0 185 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 INPP5FQ9Y2H2 1132 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 BBS5Q8N3I7 341 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 SNX25Q9H3E2 840 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 SLC4A7Q9Y6M7 1214 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 USH1CQ9Y6N9 552 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 GOLGA8CPA6NN73 597 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 SPECC1L-ADORA2AF8WAN1 911 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 MGEA5O60502 916 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 POLR2BP30876 1174 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 YIPF2Q9BWQ6 316 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 NFKBIL1Q9UBC1 381 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 DOLKQ9UPQ8 538 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 ADGBQ8N7X0 1667 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 MAP3K5Q99683 1374 aa12.09□□□□□ -0.47
CACNA1C-216ENST00000399638 OPA1O60313 960 aa12.08□□□□□ -0.47
CACNA1C-216ENST00000399638 TACC1O75410 805 aa12.08□□□□□ -0.47
CACNA1C-216ENST00000399638 APOBRQ0VD83 1088 aa12.08□□□□□ -0.47
CACNA1C-216ENST00000399638 ATP8B3O60423 1300 aa12.08□□□□□ -0.47
CACNA1C-216ENST00000399638 UBN2Q6ZU65 1347 aa12.08□□□□□ -0.47
CACNA1C-216ENST00000399638 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 SYNDIG1LA6NDD5 238 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 LRMPQ12912 555 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 POLA2Q14181 598 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 R3HDM1Q15032 1099 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 STMN4Q9H169 189 aaPredicted RBP12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 RBM8AQ9Y5S9 174 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 B4E1Z4 1266 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 TRIM55Q9BYV6 548 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 ADD3Q9UEY8 706 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 KIF24Q5T7B8 1368 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 KBTBD13C9JR72 458 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 HOXC9P31274 260 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 UBASH3AP57075 661 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 TUBB4BP68371 445 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 MTHFSDQ2M296 383 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 TTLL6Q8N841 843 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 ALKBH8Q96BT7 664 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 TLDC2A0PJX2 215 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 SEC24BO95487 1268 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 ZNF853P0CG23 659 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 ABCB5Q2M3G0 1257 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 CSRNP1Q96S65 589 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 C14orf93Q9H972 538 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 WDR17Q8IZU2 1322 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 HNRNPCL2B2RXH8 293 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 HNRNPCL1O60812 293 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 CALCRLQ16602 461 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 HP1BP3Q5SSJ5 553 aaPredicted RBP12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 ODR4Q5SWX8 454 aa12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 ZNF513Q8N8E2 541 aaPredicted RBP12.08□□□□□ -0.48
CACNA1C-216ENST00000399638 GRIN3BO60391 1043 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 TMEM191BP0C7N4 346 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 ERCC6LQ2NKX8 1250 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 MIGA2Q7L4E1 593 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 MKL2Q9ULH7 1088 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 ANGPTL3Q9Y5C1 460 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 C21orf2O43822 256 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 CLNS1AP54105 237 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 GNG11P61952 73 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 LRRC47Q8N1G4 583 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 URGCPQ8TCY9 931 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 YEATS2Q9ULM3 1422 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 WBP4O75554 376 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 RNASE9P60153 205 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 RPS8P62241 208 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 NFX1Q12986 1120 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 CALCOCO2Q13137 446 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 DCLK2Q8N568 766 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 IP6K1Q92551 441 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 RAB3IPQ96QF0 476 aaPredicted RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 MEIS3Q99687 375 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 ZBTB40Q9NUA8 1239 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 CPSF2Q9P2I0 782 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 SERPINB2P05120 415 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 TNNC1P63316 161 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 ICA1Q05084 483 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 CTDSPL2Q05D32 466 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 TBC1D10BQ4KMP7 808 aaPredicted RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 C10orf67Q8IYJ2 551 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 SNX29Q8TEQ0 813 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 EXOC4Q96A65 974 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 TMX3Q96JJ7 454 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 SYF2O95926 243 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 STMN1P16949 149 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 ARMCX5Q6P1M9 558 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 CLASP1Q7Z460 1538 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 SPICE1Q8N0Z3 855 aa12.07□□□□□ -0.48
CACNA1C-216ENST00000399638 NPATQ14207 1427 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms