RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 EPN3Q9H201 632 aa16.56■□□□□ 0.24
ITSN1-210ENST00000399353 DDX21Q9NR30 783 aaKnown RBP eCLIP16.56■□□□□ 0.24
ITSN1-210ENST00000399353 MYO1AQ9UBC5 1043 aa16.56■□□□□ 0.24
ITSN1-210ENST00000399353 G3BP2Q9UN86 482 aaKnown RBP16.56■□□□□ 0.24
ITSN1-210ENST00000399353 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
ITSN1-210ENST00000399353 MAST3O60307 1309 aa16.56■□□□□ 0.24
ITSN1-210ENST00000399353 ZMYM6O95789 1325 aa16.56■□□□□ 0.24
ITSN1-210ENST00000399353 M0R2C6 588 aa16.56■□□□□ 0.24
ITSN1-210ENST00000399353 HEXIM1O94992 359 aaKnown RBP16.56■□□□□ 0.24
ITSN1-210ENST00000399353 VIMP08670 466 aaKnown RBP16.56■□□□□ 0.24
ITSN1-210ENST00000399353 PREPLQ4J6C6 727 aaPredicted RBP16.56■□□□□ 0.24
ITSN1-210ENST00000399353 NOSTRINQ8IVI9 506 aa16.56■□□□□ 0.24
ITSN1-210ENST00000399353 OSBP2Q969R2 916 aa16.56■□□□□ 0.24
ITSN1-210ENST00000399353 CCDC51Q96ER9 411 aa16.56■□□□□ 0.24
ITSN1-210ENST00000399353 MCM8Q9UJA3 840 aa16.56■□□□□ 0.24
ITSN1-210ENST00000399353 ANGEL1Q9UNK9 670 aaKnown RBP16.56■□□□□ 0.24
ITSN1-210ENST00000399353 ZNF609O15014 1411 aa16.56■□□□□ 0.24
ITSN1-210ENST00000399353 CCDC189A1A4V9 331 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 CD44P16070 742 aaKnown RBP16.55■□□□□ 0.24
ITSN1-210ENST00000399353 SNX1Q13596 522 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 KCNB1Q14721 858 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 RPGRIP1Q96KN7 1286 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.55■□□□□ 0.24
ITSN1-210ENST00000399353 NAPBQ9H115 298 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 CEP131Q9UPN4 1083 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 CD163L1Q9NR16 1453 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 ADGRL3Q9HAR2 1447 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 ZCCHC11Q5TAX3 1644 aaKnown RBP16.55■□□□□ 0.24
ITSN1-210ENST00000399353 GCOM1H8Y6P7 765 aaPredicted RBP16.55■□□□□ 0.24
ITSN1-210ENST00000399353 MYZAPP0CAP1 466 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 XBP1P17861 261 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 SMTNP53814 917 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 IFT20Q8IY31 132 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 ARFGAP2Q8N6H7 521 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 KCNV2Q8TDN2 545 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 DYDC1Q8WWB3 177 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 MS4A14Q96JA4 679 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 KRT12Q99456 494 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 TRIM75PA6NK02 468 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 ARID4AP29374 1257 aaPredicted RBP16.55■□□□□ 0.24
ITSN1-210ENST00000399353 PAK1Q13153 545 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 CHRNA2Q15822 529 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 TTMPQ5BVD1 217 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 CCDC50Q8IVM0 306 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 MYCBPAPQ8TBZ2 947 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 DSCC1Q9BVC3 393 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 NRXN1Q9ULB1 1477 aa16.55■□□□□ 0.24
ITSN1-210ENST00000399353 PHF20L1A8MW92 1017 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 ZNF18P17022 549 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 CARSP49589 748 aaKnown RBP16.54■□□□□ 0.24
ITSN1-210ENST00000399353 SPAG1Q07617 926 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 CRYMQ14894 314 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 ACCSLQ4AC99 568 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 CAPRIN2Q6IMN6 1127 aaKnown RBP16.54■□□□□ 0.24
ITSN1-210ENST00000399353 TRAPPC11Q7Z392 1133 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 HAUS7Q99871 368 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 IFIH1Q9BYX4 1025 aaKnown RBP16.54■□□□□ 0.24
ITSN1-210ENST00000399353 ERCC5P28715 1186 aaPredicted RBP16.54■□□□□ 0.24
ITSN1-210ENST00000399353 IRX1P78414 480 aaPredicted RBP16.54■□□□□ 0.24
ITSN1-210ENST00000399353 SPATS2Q86XZ4 545 aaKnown RBP16.54■□□□□ 0.24
ITSN1-210ENST00000399353 CCDC63Q8NA47 563 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 SPATA4Q8NEY3 305 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 UHMK1Q8TAS1 419 aaKnown RBP16.54■□□□□ 0.24
ITSN1-210ENST00000399353 PARD3BQ8TEW8 1205 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 STAMBPL1Q96FJ0 436 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 FAM207AQ9NSI2 230 aaPredicted RBP16.54■□□□□ 0.24
ITSN1-210ENST00000399353 ABCF2Q9UG63 623 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 COL15A1P39059 1388 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 TRIM49BA6NDI0 452 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 GCKRQ14397 625 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 C2CD5Q86YS7 1000 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 VCPKMTQ9H867 229 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 SEC31BQ9NQW1 1179 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 STIM2Q9P246 746 aa16.54■□□□□ 0.24
ITSN1-210ENST00000399353 INO80Q9ULG1 1556 aaPredicted RBP16.54■□□□□ 0.24
ITSN1-210ENST00000399353 GKAP1Q5VSY0 366 aaPredicted RBP16.53■□□□□ 0.24
ITSN1-210ENST00000399353 PI16Q6UXB8 463 aa16.53■□□□□ 0.24
ITSN1-210ENST00000399353 CACNA2D4Q7Z3S7 1137 aa16.53■□□□□ 0.24
ITSN1-210ENST00000399353 SENP2Q9HC62 589 aa16.53■□□□□ 0.24
ITSN1-210ENST00000399353 CTNNA1P35221 906 aaKnown RBP16.53■□□□□ 0.24
ITSN1-210ENST00000399353 IFNAR2P48551 515 aa16.53■□□□□ 0.24
ITSN1-210ENST00000399353 KRT71Q3SY84 523 aa16.53■□□□□ 0.24
ITSN1-210ENST00000399353 KCNH5Q8NCM2 988 aa16.53■□□□□ 0.24
ITSN1-210ENST00000399353 SPDYE1Q8NFV5 336 aaPredicted RBP16.53■□□□□ 0.24
ITSN1-210ENST00000399353 TMCO5BA8MYB1 307 aa16.53■□□□□ 0.24
ITSN1-210ENST00000399353 B4DLN1 442 aa16.53■□□□□ 0.24
ITSN1-210ENST00000399353 MARCH6O60337 910 aa16.53■□□□□ 0.24
ITSN1-210ENST00000399353 CAND2O75155 1236 aa16.52■□□□□ 0.24
ITSN1-210ENST00000399353 TAF4BQ92750 862 aa16.52■□□□□ 0.24
ITSN1-210ENST00000399353 SYMPKQ92797 1274 aaKnown RBP16.52■□□□□ 0.24
ITSN1-210ENST00000399353 ARHGEF10O15013 1369 aa16.52■□□□□ 0.24
ITSN1-210ENST00000399353 DIAPH2O60879 1101 aa16.52■□□□□ 0.24
ITSN1-210ENST00000399353 PAK2Q13177 524 aa16.52■□□□□ 0.24
ITSN1-210ENST00000399353 PTGISQ16647 500 aa16.52■□□□□ 0.24
ITSN1-210ENST00000399353 HVCN1Q96D96 273 aa16.52■□□□□ 0.24
ITSN1-210ENST00000399353 CYFIP2Q96F07 1278 aa16.52■□□□□ 0.24
ITSN1-210ENST00000399353 PPP1R12CQ9BZL4 782 aa16.52■□□□□ 0.24
ITSN1-210ENST00000399353 STRN4Q9NRL3 753 aa16.52■□□□□ 0.24
ITSN1-210ENST00000399353 NOVA2Q9UNW9 492 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms